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Lsi11G009150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G009150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr11:12632960..12638031
RNA-Seq ExpressionLsi11G009150
SyntenyLsi11G009150
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152860.1 U-box domain-containing protein 9 [Cucumis sativus]2.4e-1257.14Show/hide
Query:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR
        T  TLTP+ LL  MI +WCLDN+ ELP+LSYEE++DNVTE HLD    KL+S SLI KK + K +    R
Subjt:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR

XP_008441805.1 PREDICTED: U-box domain-containing protein 9-like [Cucumis melo]9.6e-1460Show/hide
Query:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR
        T  TLTP+ LL  MI +WCLDN+FELP+LSYEE++DNVTE HLD   N+LMS SLI KK + K +    R
Subjt:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR

XP_022937712.1 U-box domain-containing protein 9-like [Cucurbita moschata]9.9e-1160Show/hide
Query:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK
        TLTP+  L  MILKWC+DNK ELPKL+YEE + + TE HLDE  N+L+S SL D+K + K
Subjt:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK

XP_022965721.1 U-box domain-containing protein 9-like [Cucurbita maxima]9.9e-1160Show/hide
Query:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK
        TLTP+  L  MILKWC+DNK ELPKL+YEE + + TE HLDE  N+L+S SL D+K + K
Subjt:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK

XP_023538150.1 U-box domain-containing protein 9-like [Cucurbita pepo subsp. pepo]9.9e-1160Show/hide
Query:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK
        TLTP+  L  MILKWC+DNK ELPKL+YEE + + TE HLDE  N+L+S SL D+K + K
Subjt:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK

TrEMBL top hitse value%identityAlignment
A0A0A0LHP1 RING-type E3 ubiquitin transferase1.1e-1257.14Show/hide
Query:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR
        T  TLTP+ LL  MI +WCLDN+ ELP+LSYEE++DNVTE HLD    KL+S SLI KK + K +    R
Subjt:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR

A0A1S3B4X7 RING-type E3 ubiquitin transferase4.6e-1460Show/hide
Query:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR
        T  TLTP+ LL  MI +WCLDN+FELP+LSYEE++DNVTE HLD   N+LMS SLI KK + K +    R
Subjt:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR

A0A5A7UZN6 RING-type E3 ubiquitin transferase4.6e-1460Show/hide
Query:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR
        T  TLTP+ LL  MI +WCLDN+FELP+LSYEE++DNVTE HLD   N+LMS SLI KK + K +    R
Subjt:  TKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLR

A0A6J1FC00 RING-type E3 ubiquitin transferase4.8e-1160Show/hide
Query:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK
        TLTP+  L  MILKWC+DNK ELPKL+YEE + + TE HLDE  N+L+S SL D+K + K
Subjt:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK

A0A6J1HMF9 RING-type E3 ubiquitin transferase4.8e-1160Show/hide
Query:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK
        TLTP+  L  MILKWC+DNK ELPKL+YEE + + TE HLDE  N+L+S SL D+K + K
Subjt:  TLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGGAATTGCAGGCATATAATCGATTCTTCTTCCAAAAATAGTTCCATAGAGGGCACAATACATGTCCTCGAACCAACAAAGTCGACTCTTACTCCGCATCATCT
TCTTCCGTTAATGATCTTAAAATGGTGCTTGGATAACAAATTTGAGCTTCCGAAGCTTAGTTACGAGGAAAAAATCGACAATGTGACTGAGTTCCATTTGGATGAATGCT
TTAACAAGTTGATGTCTCCATCCCTTATAGATAAAAAAAGAAGCTGCAAAGGAGTTGAGAGAAGACTGCGAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGGAATTGCAGGCATATAATCGATTCTTCTTCCAAAAATAGTTCCATAGAGGGCACAATACATGTCCTCGAACCAACAAAGTCGACTCTTACTCCGCATCATCT
TCTTCCGTTAATGATCTTAAAATGGTGCTTGGATAACAAATTTGAGCTTCCGAAGCTTAGTTACGAGGAAAAAATCGACAATGTGACTGAGTTCCATTTGGATGAATGCT
TTAACAAGTTGATGTCTCCATCCCTTATAGATAAAAAAAGAAGCTGCAAAGGAGTTGAGAGAAGACTGCGAGATTAA
Protein sequenceShow/hide protein sequence
MDRNCRHIIDSSSKNSSIEGTIHVLEPTKSTLTPHHLLPLMILKWCLDNKFELPKLSYEEKIDNVTEFHLDECFNKLMSPSLIDKKRSCKGVERRLRD