CuGenDBv2

Gene ID	Lsi11G009170
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Ubiquitin hydrolase
Genome location	chr11:12697034..12698418
RNA-Seq Expression	Lsi11G009170
Synteny	Lsi11G009170
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0061418.1 uncharacterized protein E6C27_scaffold749G001170 [Cucumis melo var. makuwa]

5.9e-67

67.26

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Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+S+YSNRNSGQIHLQH QIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-
                                        GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKLKQND+ SIPRPPPRSN    
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-

Query:  PKPVDEDLYKIPPELLHSSKRDF
        PKPVDEDLYKIPPELLHSSKR F
Subjt:  PKPVDEDLYKIPPELLHSSKRDF

TYK28677.1 uncharacterized protein E5676_scaffold165G00480 [Cucumis melo var. makuwa]

6.9e-68

67.71

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Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-
                                        GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKLKQND+ SIPRPPPRSN    
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-

Query:  PKPVDEDLYKIPPELLHSSKRDF
        PKPVDEDLYKIPPELLHSSKR F
Subjt:  PKPVDEDLYKIPPELLHSSKRDF

XP_008441806.1 PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo]

1.2e-67

67.87

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Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-
                                        GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKLKQND+ SIPRPPPRSN    
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-

Query:  PKPVDEDLYKIPPELLHSSKR
        PKPVDEDLYKIPPELLHSSKR
Subjt:  PKPVDEDLYKIPPELLHSSKR

XP_011649025.1 uncharacterized protein LOC101218053 [Cucumis sativus]

1.7e-66

66.67

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Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC PPSDLYSADR KPPPL T  RK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-
                                        GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKLKQND+ SI RPPPRSN    
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-

Query:  PKPVDEDLYKIPPELLHSSKRD
        PKPVDEDLYKIPPELLHSSKR+
Subjt:  PKPVDEDLYKIPPELLHSSKRD

XP_038889486.1 uncharacterized protein LOC120079394 [Benincasa hispida]

4.1e-68

68.33

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Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+SVYSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFESARQAGLIRYSSSSGESGPC PPSDLYSADRKKPPPLATA RK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKE--NHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSN-ARPP
                                        GRVREKR PHVGLKE  N+QIP   K+QQMQ+GR VFDVTETGGARKLKQND+S+P PP RSN +RPP
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKE--NHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSN-ARPP

Query:  KPVDEDLYKIPPELLHSSKRD
        KPVDEDLYKIPPELLHSSKR+
Subjt:  KPVDEDLYKIPPELLHSSKRD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKP3 Uncharacterized protein

8.3e-67

66.67

Show/hide

Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPC PPSDLYSADR KPPPL T  RK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-
                                        GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKLKQND+ SI RPPPRSN    
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-

Query:  PKPVDEDLYKIPPELLHSSKRD
        PKPVDEDLYKIPPELLHSSKR+
Subjt:  PKPVDEDLYKIPPELLHSSKRD

A0A1S3B517 uncharacterized protein LOC103485859

5.7e-68

67.87

Show/hide

Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-
                                        GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKLKQND+ SIPRPPPRSN    
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-

Query:  PKPVDEDLYKIPPELLHSSKR
        PKPVDEDLYKIPPELLHSSKR
Subjt:  PKPVDEDLYKIPPELLHSSKR

A0A5A7V1J3 Uncharacterized protein

2.8e-67

67.26

Show/hide

Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+S+YSNRNSGQIHLQH QIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-
                                        GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKLKQND+ SIPRPPPRSN    
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-

Query:  PKPVDEDLYKIPPELLHSSKRDF
        PKPVDEDLYKIPPELLHSSKR F
Subjt:  PKPVDEDLYKIPPELLHSSKRDF

A0A5D3DXR6 Uncharacterized protein

3.4e-68

67.71

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Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN
        ME+S+YSNRNSGQIHLQHHQIPAFGDWDKA DLPITQYFE+ARQAGLIRYSSSSGESGPCLPPSDLYSADR KP PL T ARK                 
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNN

Query:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-
                                        GRVREKRYPHVGLKE+HQI PIKKQQ   MQ+G +VFDVTETGGARKLKQND+ SIPRPPPRSN    
Subjt:  LRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQ--QMQEGRKVFDVTETGGARKLKQNDM-SIPRPPPRSNARP-

Query:  PKPVDEDLYKIPPELLHSSKRDF
        PKPVDEDLYKIPPELLHSSKR F
Subjt:  PKPVDEDLYKIPPELLHSSKRDF

A0A6J1EYC5 uncharacterized protein LOC111440009

9.2e-58

61.82

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Query:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPL--ATAARKDDEFYLSVSFEVDRR
        ME+S +S RNSGQ+    HQIPAFGDWDKAND PITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSAD KKPPPL  ATAARK               
Subjt:  MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPL--ATAARKDDEFYLSVSFEVDRR

Query:  NNLRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPK
                                          GR+REKRYPHVGLK+ HQIP +K     Q+GR   +  E GGARKLKQND+ IPRPPPRSNARPPK
Subjt:  NNLRENEEFSGKMKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPK

Query:  PVDEDLYKIPPELLHSSKRD
        PVDEDLYKIPP LLHSSKR+
Subjt:  PVDEDLYKIPPELLHSSKRD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18310.1 unknown protein

3.5e-09

26.77

Show/hide

Query:  QIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQ
        QIP FG+W++AN++PITQYFE+ RQA  ++ +S          P  L+ A R+      TA  K            ++R   R   + S +  +Y++   
Subjt:  QIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLRNQ

Query:  TGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKR
                                                           +  G ++ K ND+++         +PPKPVDEDLYKIPPE +HSS R
Subjt:  TGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKR

AT5G18310.2 unknown protein

1.4e-13

30.5

Show/hide

Query:  QIPAFGDWDKANDLPITQYFESARQAGLIR--YSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLR
        QIP FG+W++AN++PITQYFE+ RQAGLIR  Y+++S  S      S   S+  +                L ++    R  +L    + +G        
Subjt:  QIPAFGDWDKANDLPITQYFESARQAGLIR--YSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGKMKRYFLR

Query:  NQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKR
                          +EKR P   +++             Q  +   DV    G ++ K ND+++         +PPKPVDEDLYKIPPE +HSS R
Subjt:  NQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAACTCTCTGTCTATTCAAACAGAAACAGTGGCCAAATCCACTTGCAGCACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCCAATGACTTGCCGATCACTCA
GTATTTCGAAAGCGCTCGTCAGGCCGGTTTGATCCGCTACAGTTCCTCCTCCGGTGAAAGCGGCCCCTGCCTTCCTCCTTCCGACTTGTACTCCGCCGATCGGAAGAAAC
CTCCGCCACTCGCCACCGCCGCGCGCAAGGACGACGAATTTTATCTCTCTGTTTCATTCGAAGTAGATCGGAGGAATAATTTGAGAGAGAATGAGGAATTTTCCGGGAAA
ATGAAGCGATATTTTCTAAGAAACCAAACAGGGGAATTAATTAGAACACGTGGCGAGATTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAGGA
AAATCATCAGATTCCACCAATAAAGAAACAGCAGCAGATGCAAGAAGGGAGGAAAGTGTTCGACGTGACGGAAACGGGAGGAGCGCGAAAATTGAAGCAAAACGACATGT
CGATTCCGCGTCCTCCGCCTAGATCTAATGCTAGACCGCCCAAACCTGTCGATGAAGATCTCTACAAAATCCCACCTGAGCTTCTCCATTCTTCTAAGCGGGATTTCACA
TTTTCCTCTAATTAA

mRNA sequence

Show/hide mRNA sequence

GTTGGGCAGTGTGTGAAAACTGAAACACCCAAAAAGCTTCTCTAAACTTTTTGCTTTTTTCTCTTCCCTCTGATTTGTTCATCCCTTTCTTTTTTTCTCTGCCCCCATTG
CCTTAATCAGAAGCTCCAAAATCCTAAACAAATTTCTTCAAAAAGTCAAAAATCCATTGCCTTTTTCTTTTTCTTCTTCCTCATTCTCATCCTCATCACTTTCGCCTTTT
TCCATTGCCTTCTTCTTCTCTCTCTCTTATGGAACTCTCTGTCTATTCAAACAGAAACAGTGGCCAAATCCACTTGCAGCACCACCAAATCCCGGCGTTTGGAGACTGGG
ATAAGGCCAATGACTTGCCGATCACTCAGTATTTCGAAAGCGCTCGTCAGGCCGGTTTGATCCGCTACAGTTCCTCCTCCGGTGAAAGCGGCCCCTGCCTTCCTCCTTCC
GACTTGTACTCCGCCGATCGGAAGAAACCTCCGCCACTCGCCACCGCCGCGCGCAAGGACGACGAATTTTATCTCTCTGTTTCATTCGAAGTAGATCGGAGGAATAATTT
GAGAGAGAATGAGGAATTTTCCGGGAAAATGAAGCGATATTTTCTAAGAAACCAAACAGGGGAATTAATTAGAACACGTGGCGAGATTTTGCAGGGACGGGTGAGGGAAA
AGCGTTACCCGCATGTGGGATTAAAGGAAAATCATCAGATTCCACCAATAAAGAAACAGCAGCAGATGCAAGAAGGGAGGAAAGTGTTCGACGTGACGGAAACGGGAGGA
GCGCGAAAATTGAAGCAAAACGACATGTCGATTCCGCGTCCTCCGCCTAGATCTAATGCTAGACCGCCCAAACCTGTCGATGAAGATCTCTACAAAATCCCACCTGAGCT
TCTCCATTCTTCTAAGCGGGATTTCACATTTTCCTCTAATTAA

Protein sequence

Show/hide protein sequence

MELSVYSNRNSGQIHLQHHQIPAFGDWDKANDLPITQYFESARQAGLIRYSSSSGESGPCLPPSDLYSADRKKPPPLATAARKDDEFYLSVSFEVDRRNNLRENEEFSGK
MKRYFLRNQTGELIRTRGEILQGRVREKRYPHVGLKENHQIPPIKKQQQMQEGRKVFDVTETGGARKLKQNDMSIPRPPPRSNARPPKPVDEDLYKIPPELLHSSKRDFT
FSSN

Lsi11G009170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome