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Lsi11G009440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G009440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionALBINO3-like protein 2, chloroplastic
Genome locationchr11:14079566..14094308
RNA-Seq ExpressionLsi11G009440
SyntenyLsi11G009440
Gene Ontology termsGO:0090150 - establishment of protein localization to membrane (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032977 - membrane insertase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029926.1 ALBINO3-like protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-6264.81Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        +A RL EAHTLPSSHHHSF+ PTHRFD HI+SI ALTAFSSRSLWTRSDDD EF+RI  F   +S LS+DDTGIQSGIQDLELGGVVEEVI ATAVEESI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYTVCSFRGEERLWTVVGGYCFINFSSQIYAAALTHCATQQVEKDWRI--VSEVATSTATTSIGTELHRPNFSFPKGKKGNWMPLL
        LP QQLTSILDGFHQYT   +      W V+        S+      L      Q+ K  RI  +   ATSTATTS GT+LH+P FSFPKGKKGNWMP++
Subjt:  LPIQQLTSILDGFHQYTVCSFRGEERLWTVVGGYCFINFSSQIYAAALTHCATQQVEKDWRI--VSEVATSTATTSIGTELHRPNFSFPKGKKGNWMPLL

Query:  SVVRCILFHSGPMLSI
        SVV CILFHS  ++ +
Subjt:  SVVRCILFHSGPMLSI

XP_004138896.1 ALBINO3-like protein 2, chloroplastic [Cucumis sativus]5.3e-4481.2Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        + FRL EAHTL SSHH  F++P+HRFDPHISS++A TAFSSRS WTRS+DDSEF+RI H+GVESSHLSNDDT    GIQDLELGGVVEEVIGATAVE SI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LPIQQLTSILDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

XP_022933144.1 ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata]2.0e-4383.76Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        +A RL EAHTLPSSHHHSF+ PTHRFD HI+SI ALTAFSSRSLWTRSDDDSEF+RI  F   +S LS+DDTGIQSGIQDLELGGVVEEVI ATAVEESI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LP QQLTSILDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

XP_022933145.1 ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita moschata]2.0e-4383.76Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        +A RL EAHTLPSSHHHSF+ PTHRFD HI+SI ALTAFSSRSLWTRSDDDSEF+RI  F   +S LS+DDTGIQSGIQDLELGGVVEEVI ATAVEESI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LP QQLTSILDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

XP_038890165.1 ALBINO3-like protein 2, chloroplastic [Benincasa hispida]1.2e-4888.03Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        MAFRL EAHTLPS HH SFS PT RFDPH+ S AALTAFSSRSLWTRSDD+SEFE+IGHFGVESS LSNDDTGI SGIQDLELGGVVEEVIGA  VEESI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LPIQQLTSILDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

TrEMBL top hitse value%identityAlignment
A0A0A0LJT6 Uncharacterized protein2.6e-4481.2Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        + FRL EAHTL SSHH  F++P+HRFDPHISS++A TAFSSRS WTRS+DDSEF+RI H+GVESSHLSNDDT    GIQDLELGGVVEEVIGATAVE SI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LPIQQLTSILDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

A0A6J1EYX9 ALBINO3-like protein 2, chloroplastic isoform X19.8e-4483.76Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        +A RL EAHTLPSSHHHSF+ PTHRFD HI+SI ALTAFSSRSLWTRSDDDSEF+RI  F   +S LS+DDTGIQSGIQDLELGGVVEEVI ATAVEESI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LP QQLTSILDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

A0A6J1F440 ALBINO3-like protein 2, chloroplastic isoform X29.8e-4483.76Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        +A RL EAHTLPSSHHHSF+ PTHRFD HI+SI ALTAFSSRSLWTRSDDDSEF+RI  F   +S LS+DDTGIQSGIQDLELGGVVEEVI ATAVEESI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LP QQLTSILDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

A0A6J1I9X8 ALBINO3-like protein 2, chloroplastic isoform X23.2e-4281.2Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        +A RL EAHTLP+SHHHSF  PTHRFD HISSI ALTAFSSRSLWTRSDDDSEF+R   F   +S LS+DDTGIQSGIQDLELGGVVEEVI ATAVE+SI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LP QQLTS+LDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

A0A6J1ICK0 ALBINO3-like protein 2, chloroplastic isoform X13.2e-4281.2Show/hide
Query:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI
        +A RL EAHTLP+SHHHSF  PTHRFD HISSI ALTAFSSRSLWTRSDDDSEF+R   F   +S LS+DDTGIQSGIQDLELGGVVEEVI ATAVE+SI
Subjt:  MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESI

Query:  LPIQQLTSILDGFHQYT
        LP QQLTS+LDGFHQYT
Subjt:  LPIQQLTSILDGFHQYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTTCGACTTCAAGAAGCTCACACTCTCCCAAGCTCTCATCATCATTCATTCAGCAGCCCAACCCATCGCTTTGATCCTCATATAAGCTCCATTGCTGCTCTCAC
CGCATTCTCCTCTCGGTCCTTGTGGACTCGTTCTGACGATGATTCAGAGTTCGAACGGATTGGCCATTTCGGTGTTGAATCAAGCCACCTCTCGAACGACGATACGGGAA
TCCAGTCAGGGATTCAAGACTTGGAACTTGGAGGAGTTGTTGAAGAAGTCATTGGTGCGACTGCGGTGGAGGAGTCGATTTTACCAATTCAGCAACTGACTTCGATTCTG
GATGGGTTCCATCAGTATACCGTTTGCTCTTTTAGGGGTGAGGAAAGATTGTGGACTGTGGTGGGCGGTTATTGCTTCATCAACTTTAGCTCTCAGATTTACGCTGCTGC
CCTTACTCATTGTGCAACTCAACAAGTTGAAAAGGATTGGAGAATTGTTTCCGAAGTTGCCACCTCCACTGCCACCACCTCTATCGGGACGGAGTTACATCGACCAAATT
TCTCTTTTCCGAAAGGAAAGAAAGGCAATTGGATGCCCCTCCTTTCTGTGGTTCGTTGCATACTTTTCCATTCAGGTCCCATGCTTTCTATTGTGGATGGTTACTATCCG
CAAAATGTCACTTGA
mRNA sequenceShow/hide mRNA sequence
CGCTTCCCTTTCTTATCCCATGGCCTTTCGACTTCAAGAAGCTCACACTCTCCCAAGCTCTCATCATCATTCATTCAGCAGCCCAACCCATCGCTTTGATCCTCATATAA
GCTCCATTGCTGCTCTCACCGCATTCTCCTCTCGGTCCTTGTGGACTCGTTCTGACGATGATTCAGAGTTCGAACGGATTGGCCATTTCGGTGTTGAATCAAGCCACCTC
TCGAACGACGATACGGGAATCCAGTCAGGGATTCAAGACTTGGAACTTGGAGGAGTTGTTGAAGAAGTCATTGGTGCGACTGCGGTGGAGGAGTCGATTTTACCAATTCA
GCAACTGACTTCGATTCTGGATGGGTTCCATCAGTATACCGTTTGCTCTTTTAGGGGTGAGGAAAGATTGTGGACTGTGGTGGGCGGTTATTGCTTCATCAACTTTAGCT
CTCAGATTTACGCTGCTGCCCTTACTCATTGTGCAACTCAACAAGTTGAAAAGGATTGGAGAATTGTTTCCGAAGTTGCCACCTCCACTGCCACCACCTCTATCGGGACG
GAGTTACATCGACCAAATTTCTCTTTTCCGAAAGGAAAGAAAGGCAATTGGATGCCCCTCCTTTCTGTGGTTCGTTGCATACTTTTCCATTCAGGTCCCATGCTTTCTAT
TGTGGATGGTTACTATCCGCAAAATGTCACTTGA
Protein sequenceShow/hide protein sequence
MAFRLQEAHTLPSSHHHSFSSPTHRFDPHISSIAALTAFSSRSLWTRSDDDSEFERIGHFGVESSHLSNDDTGIQSGIQDLELGGVVEEVIGATAVEESILPIQQLTSIL
DGFHQYTVCSFRGEERLWTVVGGYCFINFSSQIYAAALTHCATQQVEKDWRIVSEVATSTATTSIGTELHRPNFSFPKGKKGNWMPLLSVVRCILFHSGPMLSIVDGYYP
QNVT