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Lsi11G009520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G009520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein family protein, putative
Genome locationchr11:14316997..14318827
RNA-Seq ExpressionLsi11G009520
SyntenyLsi11G009520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598970.1 hypothetical protein SDJN03_08748, partial [Cucurbita argyrosperma subsp. sororia]6.2e-4169.28Show/hide
Query:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M S TLFKS      FGA AI RRS  SN +L+ ASNP+ IH +PPQDGSEAKDAINP ANEGM   E+MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAK+AM+AA    KD+  RAK+T+V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

XP_022933143.1 uncharacterized protein At4g13230 [Cucurbita moschata]1.5e-4270.59Show/hide
Query:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGA AI RRS  SN +L+ ASNP+FIH +PPQDGSEAKDAINP ANEGM   E+MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAK+AM+AA    KD+  RAK+T+V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

XP_022973925.1 uncharacterized protein At4g13230 [Cucurbita maxima]2.1e-4170.59Show/hide
Query:  MASSTLFKS------FGAA-ITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGAA I  RS  SN +L  ASNP+FIH +PPQDGSEAKDAINP ANEGM S E MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGAA-ITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAKQAM+AA    KD+  RAK+++V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

XP_023546410.1 uncharacterized protein At4g13230 [Cucurbita pepo subsp. pepo]3.1e-4068.63Show/hide
Query:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGA AI RRS  SN +L+ ASNP+ IH +PPQDG EAKDAI P ANEGM   E+MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAK+AM+AA    KD+  RAK+T+V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

XP_038889268.1 uncharacterized protein At4g13230-like [Benincasa hispida]4.9e-5482.12Show/hide
Query:  MASSTLFKS------FGAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVS
        MASSTLFK+      FGAAITRRS  SN TLILASNP+FIH +  QDGSEAKDAINPGANEGMM  ENMMKDKAYSTAEHVSEKT DMAGMVSA AH VS
Subjt:  MASSTLFKS------FGAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVS

Query:  AKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
        AKAKQAM+AAWD+ KDT QRAK+TLVDTANDSK+FVKAN KSVEKSMNTKN
Subjt:  AKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN

TrEMBL top hitse value%identityAlignment
A0A2N9J2L7 Uncharacterized protein1.3e-2351.43Show/hide
Query:  FKSFGAAITRRSAISNPTLILASNPQFIHISP-PQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAW
        F   GAAI RR+   NP L +ASNP+ I  S  P+  S A DA+  GAN+   + +  +K+KA+STAEHV++KT DMAGM+SA A +V+ KAKQ  + AW
Subjt:  FKSFGAAITRRSAISNPTLILASNPQFIHISP-PQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAW

Query:  DTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
         T KDT Q+AK+T++  A +SKE +K NA++V++SMNTKN
Subjt:  DTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN

A0A5C7GVU8 Uncharacterized protein1.3e-2051.11Show/hide
Query:  GAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAWDTTKD
        GAAI RRS + NP L LA+  ++I  +   DGS A +A+  GA+E M ++ + MK+KAYSTA+ VS KT D+AG VS  A EV+ KAKQ ++ AW + KD
Subjt:  GAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAWDTTKD

Query:  TVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
        T Q+AK+T++  A +SKE V+ NA+ ++KSMNTKN
Subjt:  TVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN

A0A6J1CSM2 uncharacterized protein At4g13230-like6.7e-3359.49Show/hide
Query:  MASSTLFKS------FGAAITRRSAISNPTLILASNPQFIHISPPQD-----GSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSAN
        MAS TL K+       GAAI RRS  SNP L+L SNP+F+H   PQD       EAKDAINPGANE MM  E+MM + AYSTA+HV EK  DM GMV + 
Subjt:  MASSTLFKS------FGAAITRRSAISNPTLILASNPQFIHISPPQD-----GSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSAN

Query:  AHEVSAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNRP
          E+S KAKQ M+AAW    D+ QRAK+T+V+   +SKEFVKANA+SV+KSMNTKNRP
Subjt:  AHEVSAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNRP

A0A6J1F3W7 uncharacterized protein At4g132307.1e-4370.59Show/hide
Query:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGA AI RRS  SN +L+ ASNP+FIH +PPQDGSEAKDAINP ANEGM   E+MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAK+AM+AA    KD+  RAK+T+V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

A0A6J1ICL4 uncharacterized protein At4g132301.0e-4170.59Show/hide
Query:  MASSTLFKS------FGAA-ITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGAA I  RS  SN +L  ASNP+FIH +PPQDGSEAKDAINP ANEGM S E MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGAA-ITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAKQAM+AA    KD+  RAK+++V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132302.1e-0741.25Show/hide
Query:  DKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
        DKA    + V++K  + A  +S  A  +  KAK   + AWD  KDT ++ K+T+     ++KE +KA AK+VE+SMNTKN
Subjt:  DKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN

Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein1.5e-0841.25Show/hide
Query:  DKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
        DKA    + V++K  + A  +S  A  +  KAK   + AWD  KDT ++ K+T+     ++KE +KA AK+VE+SMNTKN
Subjt:  DKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAWDTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCTCCACCCTCTTCAAAAGCTTTGGTGCTGCAATTACAAGAAGATCAGCAATCTCCAACCCTACTCTCATTTTGGCTTCTAATCCTCAATTTATTCAT
ATAAGTCCACCACAAGATGGGTCAGAAGCTAAAGATGCCATTAACCCAGGAGCAAATGAAGGAATGATGTCCAGTGAAAATATGATGAAAGATAAGGCTTACTCT
ACTGCAGAACATGTGAGTGAAAAGACAATGGATATGGCAGGAATGGTCAGTGCAAACGCACATGAGGTTTCAGCAAAGGCAAAGCAAGCAATGAAAGCAGCATGG
GACACAACAAAGGACACAGTCCAAAGGGCAAAAAACACATTGGTTGACACTGCCAATGACTCCAAGGAATTTGTCAAAGCAAATGCTAAATCTGTTGAGAAGAGC
ATGAACACCAAGAACCGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCTCCACCCTCTTCAAAAGCTTTGGTGCTGCAATTACAAGAAGATCAGCAATCTCCAACCCTACTCTCATTTTGGCTTCTAATCCTCAATTTATTCAT
ATAAGTCCACCACAAGATGGGTCAGAAGCTAAAGATGCCATTAACCCAGGAGCAAATGAAGGAATGATGTCCAGTGAAAATATGATGAAAGATAAGGCTTACTCT
ACTGCAGAACATGTGAGTGAAAAGACAATGGATATGGCAGGAATGGTCAGTGCAAACGCACATGAGGTTTCAGCAAAGGCAAAGCAAGCAATGAAAGCAGCATGG
GACACAACAAAGGACACAGTCCAAAGGGCAAAAAACACATTGGTTGACACTGCCAATGACTCCAAGGAATTTGTCAAAGCAAATGCTAAATCTGTTGAGAAGAGC
ATGAACACCAAGAACCGTCCTTAA
Protein sequenceShow/hide protein sequence
MASSTLFKSFGAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMSSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMKAAW
DTTKDTVQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNRP