; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G009660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G009660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF538
Genome locationchr11:15186963..15189377
RNA-Seq ExpressionLsi11G009660
SyntenyLsi11G009660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138912.1 uncharacterized protein LOC101222871 [Cucumis sativus]8.6e-8084.13Show/hide
Query:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS
        MTL L SPF +   ILFFFASP I A DPSTIYDHL L+GLPIGLLPKNIT+FSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGIS
Subjt:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS

Query:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQ--NLQLEDSELRATS
        SQELFLWFPVKGIRVDL TSG+IHFDVGVVDKQFSLSLFESP DCTAADPVD+S AF+ ASLD+D P STKE Q  N QLE SELRA+S
Subjt:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQ--NLQLEDSELRATS

XP_008441719.1 PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]1.1e-8789.84Show/hide
Query:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS
        MTL L SPF    F   FFASPLIAAPDPSTIYDHL LHGLPIGLLPKNIT+FSIDSSTGRF VFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGIS
Subjt:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS

Query:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS
        SQELFLWFPVKGIRVDL +SGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAF+ ASLD D PFSTKEAQNLQLEDSELRATS
Subjt:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS

XP_022946011.1 uncharacterized protein LOC111450229 [Cucurbita moschata]8.6e-8091.12Show/hide
Query:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS
        M LS+SSPFSLL FIL FFASPLIAAP+P+TIYDHL  HGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL YGQIAELAGIS
Subjt:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS

Query:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFS
        SQELFLWFPVKGIRVDL TSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQS A DG SL LDG FS
Subjt:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFS

XP_022949506.1 uncharacterized protein LOC111452833 [Cucurbita moschata]2.5e-7985.88Show/hide
Query:  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPV
        LL   L FFASPL+AA DPSTIYDHL LHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPV
Subjt:  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPV

Query:  KGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS
        KGI VDL +SG+IHFDVGVVDKQFSLSLFESPPDCTAADPVD SF  +GAS+DL+   S  EAQNLQLED ELRA S
Subjt:  KGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS

XP_038891231.1 uncharacterized protein LOC120080586 [Benincasa hispida]7.2e-9595.19Show/hide
Query:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS
        MTLSLSS FSLLPFILFFFASPLIAAPDPSTIYDHL LHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGIS
Subjt:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS

Query:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS
        SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSF F+GASLD  GPFS  EAQNLQLEDSELRATS
Subjt:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS

TrEMBL top hitse value%identityAlignment
A0A0A0LN19 Uncharacterized protein4.2e-8084.13Show/hide
Query:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS
        MTL L SPF +   ILFFFASP I A DPSTIYDHL L+GLPIGLLPKNIT+FSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGIS
Subjt:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS

Query:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQ--NLQLEDSELRATS
        SQELFLWFPVKGIRVDL TSG+IHFDVGVVDKQFSLSLFESP DCTAADPVD+S AF+ ASLD+D P STKE Q  N QLE SELRA+S
Subjt:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQ--NLQLEDSELRATS

A0A1S3B435 uncharacterized protein LOC1034857965.4e-8889.84Show/hide
Query:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS
        MTL L SPF    F   FFASPLIAAPDPSTIYDHL LHGLPIGLLPKNIT+FSIDSSTGRF VFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGIS
Subjt:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS

Query:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS
        SQELFLWFPVKGIRVDL +SGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAF+ ASLD D PFSTKEAQNLQLEDSELRATS
Subjt:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS

A0A6J1G2H3 uncharacterized protein LOC1114502294.2e-8091.12Show/hide
Query:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS
        M LS+SSPFSLL FIL FFASPLIAAP+P+TIYDHL  HGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL YGQIAELAGIS
Subjt:  MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS

Query:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFS
        SQELFLWFPVKGIRVDL TSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQS A DG SL LDG FS
Subjt:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFS

A0A6J1GC72 uncharacterized protein LOC1114528331.2e-7985.88Show/hide
Query:  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPV
        LL   L FFASPL+AA DPSTIYDHL LHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPV
Subjt:  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPV

Query:  KGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS
        KGI VDL +SG+IHFDVGVVDKQFSLSLFESPPDCTAADPVD SF  +GAS+DL+   S  EAQNLQLED ELRA S
Subjt:  KGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS

A0A6J1K9Y4 uncharacterized protein LOC1114929974.6e-7985.31Show/hide
Query:  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPV
        LL   L FFASPL+AA DPSTIYDHL LHGLPIGLLPK+ITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPV
Subjt:  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPV

Query:  KGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS
        KGI VDL +SG+IHFDVGVVDKQFSLSLFESPPDCTAADPVD SF  +GAS+DL+   S  EAQNLQLED ELRA S
Subjt:  KGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61667.1 Protein of unknown function, DUF5381.3e-3045.8Show/hide
Query:  ILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIR
        +L     P I     S+I + L+  GLP GL P N+  +S+D  TG  +V L  PC A+FEN V++D  +   L+YG +  L G++ +ELFLW PVKGI 
Subjt:  ILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIR

Query:  VDLPTSGVIHFDVGVVDKQFSLSLFESPPDC
        V+ P+SG++ FD+GV  KQ S SLFE PP C
Subjt:  VDLPTSGVIHFDVGVVDKQFSLSLFESPPDC

AT3G07460.1 Protein of unknown function, DUF5383.3e-3753.62Show/hide
Query:  SLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFP
        +LL F+L    S      +  +I + L  +GLP+GL PK +  F+++  TGRF V+L+Q C AK+E E+HYD  VSG + Y QI +L+GIS+QELFLW  
Subjt:  SLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFP

Query:  VKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTA
        VKGIRVD+P+SG+I FDVGV+ KQ+SLSLFE+P DC A
Subjt:  VKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTA

AT3G07460.2 Protein of unknown function, DUF5383.3e-3753.62Show/hide
Query:  SLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFP
        +LL F+L    S      +  +I + L  +GLP+GL PK +  F+++  TGRF V+L+Q C AK+E E+HYD  VSG + Y QI +L+GIS+QELFLW  
Subjt:  SLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFP

Query:  VKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTA
        VKGIRVD+P+SG+I FDVGV+ KQ+SLSLFE+P DC A
Subjt:  VKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTA

AT3G07470.1 Protein of unknown function, DUF5388.4e-4159.5Show/hide
Query:  AAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIH
        A  +  TIY+ L  +GLP G+ PK +  F+ D  TGRF V+L+Q C AK+E E+HYD N++G +   QI++L+GIS+QELFLWFPVKGIRVD+P+SG+I+
Subjt:  AAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIH

Query:  FDVGVVDKQFSLSLFESPPDC
        FDVGVV KQ+SLSLFE+P DC
Subjt:  FDVGVVDKQFSLSLFESPPDC

AT5G16380.1 Protein of unknown function, DUF5384.9e-4147.85Show/hide
Query:  LSSPFSLLPFILFFFAS----PLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS
        + S   L   I+  F+S     L + PDPS  YD+L+   LP G++PK +T FSID  TGRF V L  PC+AKFEN+ H+D+N+SG L+ G+I  L+G++
Subjt:  LSSPFSLLPFILFFFAS----PLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGIS

Query:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRAT
         +ELFLWF VKGI VD  +SG+IHFDVGV DKQ SLSLFESP DCTAA+   +       ++DL  P      ++L+ +  E+++T
Subjt:  SQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCTTTCTCTCTCTTCCCCTTTCTCTCTCCTCCCCTTCATCCTCTTCTTCTTCGCCTCCCCTCTCATCGCCGCTCCTGACCCATCCACCATTTACGACCATCTCCA
ACTTCACGGCCTCCCCATCGGCCTCCTCCCCAAGAACATCACCAGATTCTCAATCGATTCTTCCACCGGACGTTTCCAGGTCTTCCTCGACCAACCCTGCAATGCCAAGT
TTGAGAATGAGGTTCATTATGATTTCAACGTCTCCGGCAGGCTCACCTACGGCCAGATCGCTGAATTGGCCGGAATTTCCTCCCAGGAGCTCTTTCTTTGGTTTCCTGTT
AAGGGAATTCGTGTCGATTTGCCCACTTCTGGTGTAATTCATTTCGACGTCGGTGTTGTTGACAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCGCCTGATTGCACTGC
GGCTGATCCGGTTGATCAATCCTTCGCCTTCGATGGAGCCTCTCTCGATTTGGATGGGCCTTTTTCGACGAAGGAAGCACAGAATCTCCAGCTTGAAGACAGTGAACTAA
GGGCAACCTCATAG
mRNA sequenceShow/hide mRNA sequence
GTGATGAAGGAATGAATACGCGAAAAGAAGAGTGAAACGCAAACCTCAGAAATTCCCATTCCTTCTTCTTCTCTTCCTCTTGCAGCCTCCAGGCTTTGCCTCTGTTCTTG
CGCCGTTCTTCTCTGCCGCCTTCTTCAACCTCAAAATTCCCAATTCCTCTCTGTCTTCTTCTCCATTTTCCATTTCCGCCATGACCCTTTCTCTCTCTTCCCCTTTCTCT
CTCCTCCCCTTCATCCTCTTCTTCTTCGCCTCCCCTCTCATCGCCGCTCCTGACCCATCCACCATTTACGACCATCTCCAACTTCACGGCCTCCCCATCGGCCTCCTCCC
CAAGAACATCACCAGATTCTCAATCGATTCTTCCACCGGACGTTTCCAGGTCTTCCTCGACCAACCCTGCAATGCCAAGTTTGAGAATGAGGTTCATTATGATTTCAACG
TCTCCGGCAGGCTCACCTACGGCCAGATCGCTGAATTGGCCGGAATTTCCTCCCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCCCACTTCT
GGTGTAATTCATTTCGACGTCGGTGTTGTTGACAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCTTCGCCTT
CGATGGAGCCTCTCTCGATTTGGATGGGCCTTTTTCGACGAAGGAAGCACAGAATCTCCAGCTTGAAGACAGTGAACTAAGGGCAACCTCATAGATTAGCGACAAAGAAA
TGTTGTGGATTTTCCAAGGATGTCATTTCGAGAGAGTCTGGCTTTGCTGGTCTGGTAAATCGTAGATTTTCCTCTACTATTTGTGGATTGCTTTTGTTTTGTACAGTCTT
TGTTTCCTGATAGTTCTGTCTGATGGGGGAAAAGAGGCCTATTTGTCTTCATATAAAGAGCTTACAGAAATATATAGCCTCCAACCATCAAGTCTATACTACTAGCTGAA
TTTAAGGGAGGAGATCGTTGCTTGGGTCGGTTTATAAGAATCCTAGAAGTTTGGTATAATTTAGAAGTCATCTCGTCTATTGCAAGTGTTTTTTATATCTCTATTATGAA
GTATATTACTGCTTCTGTGTTTGGTTTTGGCTACTCACATAAA
Protein sequenceShow/hide protein sequence
MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPV
KGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS