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Lsi11G010000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G010000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit T, chloroplastic
Genome locationchr11:16913982..16915786
RNA-Seq ExpressionLsi11G010000
SyntenyLsi11G010000
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044618 - NAD(P)H-quinone oxidoreductase subunit T-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033427.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2969.52Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDS
        MASP IPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEGWIGG      +++  + +NNNNNN LGPSL DLLNNSSDS
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDS

Query:  HYQYV
        HYQ++
Subjt:  HYQYV

XP_004137622.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [Cucumis sativus]3.8e-3278.22Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY
        MASPP PNSLL H T FHS A TFRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEGWI G  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQ+
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY

Query:  V
        +
Subjt:  V

XP_008462782.1 PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucumis melo]1.0e-3278.22Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY
        MAS P PNSLL H T FHSPA  FRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEGWIGG  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQ+
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY

Query:  V
        +
Subjt:  V

XP_023521950.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo subsp. pepo]4.7e-3070.48Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDS
        MASP IPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEGWIGG      +++  + +NNNNNN LGPSLADLLNNSSDS
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDS

Query:  HYQYV
        HYQ++
Subjt:  HYQYV

XP_038893780.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Benincasa hispida]1.1e-3177.23Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY
        MASPPIPNSLL H T FHS A TFR+WRVYASQAP+ N+ ++RPPPGVDTRIHWQNQEEGWIGG HKKET  HDN      LGPSLADLLNNSSDSHYQ+
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY

Query:  V
        +
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A0A0LT25 J domain-containing protein1.8e-3278.22Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY
        MASPP PNSLL H T FHS A TFRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEGWI G  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQ+
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY

Query:  V
        +
Subjt:  V

A0A1S3CHS6 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic4.9e-3378.22Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY
        MAS P PNSLL H T FHSPA  FRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEGWIGG  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQ+
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY

Query:  V
        +
Subjt:  V

A0A5D3BJW7 NAD(P)H-quinone oxidoreductase subunit T4.9e-3378.22Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY
        MAS P PNSLL H T FHSPA  FRTWRVYA+QA  PNNDR+RPPPGVDTRIHWQN+EEGWIGG  KKE+ND  NN +NN+LGPSLADLLNNSSDSHYQ+
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY

Query:  V
        +
Subjt:  V

A0A6J1HJ56 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic6.6e-3069.52Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDS
        MASP IPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEGWIGG      +++  + +NNNNNN LGPSL DLLNNSSDS
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGG----HHKKETNDHDNNNNNNILGPSLADLLNNSSDS

Query:  HYQYV
        HYQ++
Subjt:  HYQYV

A0A6J1JM84 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic5.2e-2769.31Show/hide
Query:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY
        MAS PIPNSL  + T FHSPA TFRTW VYASQ P   N+RQRPPPGVDTRIHWQN EEGWIGG    ++       NNN LGPS ADLLNNSSDSHYQ+
Subjt:  MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQY

Query:  V
        +
Subjt:  V

SwissProt top hitse value%identityAlignment
Q9SMS0 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic4.7e-0942.86Show/hide
Query:  RTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQYV
        R  R+YASQ P+  +   +P PGVDTRIHW++ +EGWIGG         D +  N +     A+L+ +S DSHYQ++
Subjt:  RTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQYV

Arabidopsis top hitse value%identityAlignment
AT4G09350.1 Chaperone DnaJ-domain superfamily protein3.4e-1042.86Show/hide
Query:  RTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQYV
        R  R+YASQ P+  +   +P PGVDTRIHW++ +EGWIGG         D +  N +     A+L+ +S DSHYQ++
Subjt:  RTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCCCTCCAATTCCCAATTCTCTCCTCTCTCACACAACCTTCTTCCACTCGCCTGCTCACACGTTCCGTACATGGCGTGTCTATGCATCTCAAGCTCCCAGTCC
CAACAACGACCGCCAAAGACCTCCACCGGGTGTCGACACAAGAATTCATTGGCAAAACCAAGAAGAAGGTTGGATTGGAGGACACCACAAAAAGGAGACTAACGATCATG
ATAATAATAATAATAATAATATTTTGGGTCCAAGTTTGGCCGACTTGCTCAACAACTCATCCGATTCTCACTACCAGTACGTCACTCGTCATAATTCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCCCTCCAATTCCCAATTCTCTCCTCTCTCACACAACCTTCTTCCACTCGCCTGCTCACACGTTCCGTACATGGCGTGTCTATGCATCTCAAGCTCCCAGTCC
CAACAACGACCGCCAAAGACCTCCACCGGGTGTCGACACAAGAATTCATTGGCAAAACCAAGAAGAAGGTTGGATTGGAGGACACCACAAAAAGGAGACTAACGATCATG
ATAATAATAATAATAATAATATTTTGGGTCCAAGTTTGGCCGACTTGCTCAACAACTCATCCGATTCTCACTACCAGTACGTCACTCGTCATAATTCTTTCTAGATAAAA
AGTGCATATCGGAGATTATCAAAAGAATATCATCCCGACACAACGTCTCTCCCTCTAAAAGCTGCGTCGGAGAAATTCATGAAATTAAAACAAGTGTACGATGTCCTGAG
CAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAATTGAGGATTAAATTAGAAGATCCTTACGAGCAAGAGTTGC
AAAATTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGACTTGAGTGATCAGGCCACCACTGCTCTTACTGTGGATATCCTTATCATTCTCTTT
GCTATAGCCTGTATTGTTTATGTCTTGATTTTTAAAGAACCATATTATTGA
Protein sequenceShow/hide protein sequence
MASPPIPNSLLSHTTFFHSPAHTFRTWRVYASQAPSPNNDRQRPPPGVDTRIHWQNQEEGWIGGHHKKETNDHDNNNNNNILGPSLADLLNNSSDSHYQYVTRHNSF