; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G010060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G010060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDEAD-box ATP-dependent RNA helicase FANCM isoform X1
Genome locationchr11:16981817..16997296
RNA-Seq ExpressionLsi11G010060
SyntenyLsi11G010060
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsIPR006935 - Helicase/UvrB, N-terminal
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR039686 - FANCM/Mph1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037083.1 Fanconi anemia group M protein isoform X6 [Cucumis melo var. makuwa]5.4e-11580.58Show/hide
Query:  MAFDMCPMASTSNREFIV----DDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPI
        MAF MCPMA+ SNREF V    DDDVNA                         DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+
Subjt:  MAFDMCPMASTSNREFIV----DDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPI

Query:  SKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAV
        S+ENEKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAV
Subjt:  SKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAV

Query:  VMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        VMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  VMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

XP_008441145.1 PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis melo]3.5e-11480.29Show/hide
Query:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN
        MAF MCPMA+ SNREF VDD+ +                          DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+S+EN
Subjt:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN

Query:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
        EKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
Subjt:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN

Query:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

XP_008441146.1 PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis melo]3.5e-11480.29Show/hide
Query:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN
        MAF MCPMA+ SNREF VDD+ +                          DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+S+EN
Subjt:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN

Query:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
        EKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
Subjt:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN

Query:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

XP_016899456.1 PREDICTED: Fanconi anemia group M protein isoform X5 [Cucumis melo]3.5e-11480.29Show/hide
Query:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN
        MAF MCPMA+ SNREF VDD+ +                          DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+S+EN
Subjt:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN

Query:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
        EKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
Subjt:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN

Query:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

XP_038884538.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Benincasa hispida]8.9e-11883.33Show/hide
Query:  MCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKENEKRG
        MC MASTSNREFIVDDD +                          DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDASAETP+SFP SK+NEKRG
Subjt:  MCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKENEKRG

Query:  TSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRW
        TSRQSTLHRFIVNP  KSRKKTLDVE+PVQDPGLVED+VGLV IDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRW
Subjt:  TSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRW

Query:  FPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        FPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINP KRA FW+SKRVFFVTPQVLEKDIQSG
Subjt:  FPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

TrEMBL top hitse value%identityAlignment
A0A1S3B2A7 Fanconi anemia group M protein isoform X41.7e-11480.29Show/hide
Query:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN
        MAF MCPMA+ SNREF VDD+ +                          DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+S+EN
Subjt:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN

Query:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
        EKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
Subjt:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN

Query:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

A0A1S3B3H7 Fanconi anemia group M protein isoform X21.7e-11480.29Show/hide
Query:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN
        MAF MCPMA+ SNREF VDD+ +                          DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+S+EN
Subjt:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN

Query:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
        EKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
Subjt:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN

Query:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

A0A1S4DTZ2 Fanconi anemia group M protein isoform X51.7e-11480.29Show/hide
Query:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN
        MAF MCPMA+ SNREF VDD+ +                          DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+S+EN
Subjt:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN

Query:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
        EKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
Subjt:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN

Query:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

A0A1S4DUR1 Fanconi anemia group M protein isoform X31.7e-11480.29Show/hide
Query:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN
        MAF MCPMA+ SNREF VDD+ +                          DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+S+EN
Subjt:  MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPISKEN

Query:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
        EKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN
Subjt:  EKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYN

Query:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  YFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

A0A5A7T298 Fanconi anemia group M protein isoform X62.6e-11580.58Show/hide
Query:  MAFDMCPMASTSNREFIV----DDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPI
        MAF MCPMA+ SNREF V    DDDVNA                         DFDWEAAVKEIDVACLSGIHSASSHSLHP     SDA+AETP+SFP+
Subjt:  MAFDMCPMASTSNREFIV----DDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHP-----SDASAETPSSFPI

Query:  SKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAV
        S+ENEKRGTSRQSTLHRFI+  N K +KKT+DVE+PVQDPGLVED+VGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAV
Subjt:  SKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAV

Query:  VMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        VMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTG+INP KRA FWRSKRVFFVTPQVLEKDIQSG
Subjt:  VMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

SwissProt top hitse value%identityAlignment
A4RN08 ATP-dependent DNA helicase MPH12.0e-3543.98Show/hide
Query:  DASAETPSSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNV-PLRDYQLAITKTALFSNTLVA
        D S E   + PI     +  T +Q+TL   I +  P+    T      V    L  +      +D EA KTW+YP N+ P+RDYQ +I K  LF+NTLVA
Subjt:  DASAETPSSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNV-PLRDYQLAITKTALFSNTLVA

Query:  LPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG
        LPTGLGKT IAA V+ N+FRW    ++VF AP++PL  QQ+EAC NI GIP+  +  +TG   P  R   W  KR+FF+TPQ L  D+  G
Subjt:  LPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSG

I3XHK1 DEAD-box ATP-dependent RNA helicase FANCM7.0e-7367.71Show/hide
Query:  DFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETP-SSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAA
        +FDWEAAVKEID+ACL   +++SS S H       TP ++ PI+    K    RQSTL +FI     K     +  E  V D     D   LV ID EAA
Subjt:  DFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETP-SSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAA

Query:  KTWIYPVN--VPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRA
        KTWIYPVN  VPLRDYQ AITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVF APSRPLV+QQIEACHNIVGIPQEWTID+TG   P+KRA
Subjt:  KTWIYPVN--VPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRA

Query:  CFWRSKRVFFVTPQVLEKDIQSG
          W+SKRVFFVTPQVLEKDIQSG
Subjt:  CFWRSKRVFFVTPQVLEKDIQSG

Q8BGE5 Fanconi anemia group M protein homolog1.3e-3959.35Show/hide
Query:  AAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRA
        A   WIYP N P+RDYQL I+++ALF NTLV LPTGLGKT IAAVVMYN++RWFP GK+VF AP++PLV QQ+EAC +++GIPQ    +MTG      R 
Subjt:  AAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRA

Query:  CFWRSKRVFFVTPQVLEKDIQSG
          W S+RV F+TPQV+  D+  G
Subjt:  CFWRSKRVFFVTPQVLEKDIQSG

Q8IYD8 Fanconi anemia group M protein2.7e-4060.98Show/hide
Query:  AAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRA
        A   WIYP N P+RDYQL I++ ALF NTLV LPTGLGKT IAAVVMYN++RWFP GK+VF AP++PLV QQIEAC+ ++GIPQ    +MTG    + R 
Subjt:  AAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRA

Query:  CFWRSKRVFFVTPQVLEKDIQSG
          W SKRV F+TPQV+  D+  G
Subjt:  CFWRSKRVFFVTPQVLEKDIQSG

Q9UT23 ATP-dependent DNA helicase fml11.1e-3857.03Show/hide
Query:  DIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLIN
        ++DE AA+ W+YP+NV  RDYQ  I + ALF N LVALPTGLGKT IAAVVM NY RWFP+  IVF AP++PLV QQ+EAC+ I GIP+  T +++G + 
Subjt:  DIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLIN

Query:  PTKRACFWRSKRVFFVTPQVLEKDIQSG
         T R  +++S+ VFFVTPQ +  DI+ G
Subjt:  PTKRACFWRSKRVFFVTPQVLEKDIQSG

Arabidopsis top hitse value%identityAlignment
AT1G35530.1 DEAD/DEAH box RNA helicase family protein1.1e-7367.42Show/hide
Query:  DFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETP-SSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAA
        +FDWEAAVKEID+ACL   +++SS S H       TP ++ PI+    K    RQSTL +FI     K     +  E  V D     D   LV ID EAA
Subjt:  DFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETP-SSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAA

Query:  KTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACF
        KTWIYP  VPLRDYQ AITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVF APSRPLV+QQIEACHNIVGIPQEWTID+TG   P+KRA  
Subjt:  KTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACF

Query:  WRSKRVFFVTPQVLEKDIQSG
        W+SKRVFFVTPQVLEKDIQSG
Subjt:  WRSKRVFFVTPQVLEKDIQSG

AT1G35530.2 DEAD/DEAH box RNA helicase family protein1.1e-7367.42Show/hide
Query:  DFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETP-SSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAA
        +FDWEAAVKEID+ACL   +++SS S H       TP ++ PI+    K    RQSTL +FI     K     +  E  V D     D   LV ID EAA
Subjt:  DFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETP-SSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAA

Query:  KTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACF
        KTWIYP  VPLRDYQ AITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVF APSRPLV+QQIEACHNIVGIPQEWTID+TG   P+KRA  
Subjt:  KTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGLINPTKRACF

Query:  WRSKRVFFVTPQVLEKDIQSG
        W+SKRVFFVTPQVLEKDIQSG
Subjt:  WRSKRVFFVTPQVLEKDIQSG

AT1G36020.1 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT1G35530.1)4.3e-0941.35Show/hide
Query:  DFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETPSSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAK
        +FDWEAAVKEID+ACL       + + HP           PI++   K    RQSTL +FI    PK     +  E    D     D   LV+ID EAAK
Subjt:  DFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETPSSFPISKENEKRGTSRQSTLHRFIVNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAK

Query:  TWIY
        TWIY
Subjt:  TWIY

AT3G03300.1 dicer-like 23.2e-0441.54Show/hide
Query:  RDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGK---IVFTAPSRPLVLQQIEA
        R YQ+   + A+  NT+V L TG GKTLIA +++ +Y   F +      VF  P   LV QQ EA
Subjt:  RDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGK---IVFTAPSRPLVLQQIEA

AT3G03300.3 dicer-like 23.2e-0441.54Show/hide
Query:  RDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGK---IVFTAPSRPLVLQQIEA
        R YQ+   + A+  NT+V L TG GKTLIA +++ +Y   F +      VF  P   LV QQ EA
Subjt:  RDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGK---IVFTAPSRPLVLQQIEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTGATATGTGTCCGATGGCTTCAACAAGTAATCGAGAATTCATTGTCGACGACGACGTAAATGCCGTCCTTCCTCTTTCTTGTTCTATGGCGTTTTATATATC
TGAGTCCTTTGATCCTTCTCTCCCATTCCCTTTTCAGGATTTCGACTGGGAAGCAGCCGTCAAGGAAATTGATGTGGCCTGCCTATCAGGAATTCACTCTGCTTCATCAC
ATTCACTTCATCCTTCCGACGCCTCTGCAGAAACCCCATCTTCATTTCCAATTTCCAAGGAGAATGAAAAACGCGGGACTTCTCGCCAGTCTACACTTCACAGATTTATC
GTAAATCCAAATCCCAAGTCTCGAAAGAAAACACTGGACGTCGAACAACCGGTTCAAGATCCCGGCCTTGTTGAAGACACGGTTGGTCTTGTTGACATCGATGAGGAGGC
AGCTAAGACTTGGATATATCCAGTTAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACCAAGACAGCACTATTTTCAAATACGTTGGTGGCTTTGCCTACAGGACTTG
GAAAGACTCTCATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCCGAGGGCAAAATAGTATTTACTGCTCCTTCTCGACCACTGGTCTTGCAACAGATAGAA
GCATGCCATAATATTGTCGGAATACCACAAGAATGGACCATTGACATGACAGGGCTGATAAATCCGACAAAAAGAGCATGTTTTTGGAGAAGTAAAAGAGTTTTCTTTGT
TACTCCACAAGTGCTAGAGAAGGATATTCAATCAGGTGGTTCTTTTGATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTTGATATGTGTCCGATGGCTTCAACAAGTAATCGAGAATTCATTGTCGACGACGACGTAAATGCCGTCCTTCCTCTTTCTTGTTCTATGGCGTTTTATATATC
TGAGTCCTTTGATCCTTCTCTCCCATTCCCTTTTCAGGATTTCGACTGGGAAGCAGCCGTCAAGGAAATTGATGTGGCCTGCCTATCAGGAATTCACTCTGCTTCATCAC
ATTCACTTCATCCTTCCGACGCCTCTGCAGAAACCCCATCTTCATTTCCAATTTCCAAGGAGAATGAAAAACGCGGGACTTCTCGCCAGTCTACACTTCACAGATTTATC
GTAAATCCAAATCCCAAGTCTCGAAAGAAAACACTGGACGTCGAACAACCGGTTCAAGATCCCGGCCTTGTTGAAGACACGGTTGGTCTTGTTGACATCGATGAGGAGGC
AGCTAAGACTTGGATATATCCAGTTAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACCAAGACAGCACTATTTTCAAATACGTTGGTGGCTTTGCCTACAGGACTTG
GAAAGACTCTCATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCCGAGGGCAAAATAGTATTTACTGCTCCTTCTCGACCACTGGTCTTGCAACAGATAGAA
GCATGCCATAATATTGTCGGAATACCACAAGAATGGACCATTGACATGACAGGGCTGATAAATCCGACAAAAAGAGCATGTTTTTGGAGAAGTAAAAGAGTTTTCTTTGT
TACTCCACAAGTGCTAGAGAAGGATATTCAATCAGGTGGTTCTTTTGATCCTTAG
Protein sequenceShow/hide protein sequence
MAFDMCPMASTSNREFIVDDDVNAVLPLSCSMAFYISESFDPSLPFPFQDFDWEAAVKEIDVACLSGIHSASSHSLHPSDASAETPSSFPISKENEKRGTSRQSTLHRFI
VNPNPKSRKKTLDVEQPVQDPGLVEDTVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFTAPSRPLVLQQIE
ACHNIVGIPQEWTIDMTGLINPTKRACFWRSKRVFFVTPQVLEKDIQSGGSFDP