; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G010210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G010210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMatrin-type domain-containing protein
Genome locationchr11:17357538..17362283
RNA-Seq ExpressionLsi11G010210
SyntenyLsi11G010210
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0071011 - precatalytic spliceosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000690 - Matrin/U1-C, C2H2-type zinc finger
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR013085 - U1-C, C2H2-type zinc finger
IPR036236 - Zinc finger C2H2 superfamily
IPR040023 - WW domain-binding protein 4
IPR041591 - OCRE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454929.1 PREDICTED: uncharacterized protein C18H10.07 [Cucumis melo]2.9e-12391.73Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNV K+LANMRKENAAKDKEQKEAVRA+EQIEAKAN SYQKD+AN REARDSHALPVDV E G
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        +EKWELDSTSGYYYNESNGFYYDS+SGFYYSDAIGKWVTQEEAHSSPQFFL+SKHKKP+L  PSSASAS AIK+KNVDK E GP PGLVVSASLNPKRSV
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSSIAVGKRKRPDEKQKA+SEEEKAALKAREAAKKRVEKREKPLLGLY+LP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

XP_022135853.1 zinc finger protein ZOP1 [Momordica charantia]1.6e-12189.76Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAK+KEQKEAVRA+EQIEAKA  SYQKD+AN R+ARDSHALPVDV ENG
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        EEKWE DSTSGYYYNESNGFYYDS+SGFYY DA+GKWVTQEEAH+SPQFF N KHKKP+LEKPSSASASAA+K+KNVDKGESGP PGLVVSASLNP RSV
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSS+AVGKRKRPD KQK +S+EEKAALKAREAAKKRVE+REKPLLGLYKLP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

XP_022953041.1 zinc finger protein ZOP1 [Cucurbita moschata]4.2e-12292.52Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELG+RHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKA  SYQKD+AN REARDSHALPVDV EN 
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        EEKWELDST+GYYYNESNGFYYDS+SGFYYSDAIGKWVTQEEAH+SPQFFLNSKHKKPVLE PSSASASAAIK+KNVDKGESGP PGLVVSAS  PKRSV
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSSIAVGKRKRP+EKQK +SEEEKAALKAREAAKKRVE+REKPLLGLYKLP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

XP_031744713.1 uncharacterized protein LOC101207712 isoform X3 [Cucumis sativus]4.1e-12592.52Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAK+LANMRKENAAKDKEQKEAVRA+EQIEAKAN SYQKD+AN REARDSHALPVDV E G
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        +EKWELDSTSGYYYNESNGFYYDS+SGFYYSDAIGKWVTQEEAHSSPQFFL+SKHKKP+L KPSSASAS AIK+KNVDKGE GP PGLVVSASLNPKRS+
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSSIAVGKRKRPDEKQKA+SEEEKAALKAREAAKKRVEKREKPLLGLY+LP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

XP_038888245.1 zinc finger protein ZOP1 [Benincasa hispida]9.7e-12794.09Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAK+LANMRKENAAKDKEQKEAVRA+EQIEAKAN SYQKD+ANLREA+DSHALPV+V ENG
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        EE+WELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQ+FLNSKHKKPVL KPSSASASAAIK+KNVDKGESGP PGLVVSASLNPKRSV
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSS+AVGKRKRPDEKQKA+SEEEKAALKAREAAKKRVE+REKPLLGLYKLP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

TrEMBL top hitse value%identityAlignment
A0A0A0K4T4 Matrin-type domain-containing protein2.0e-12592.52Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAK+LANMRKENAAKDKEQKEAVRA+EQIEAKAN SYQKD+AN REARDSHALPVDV E G
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        +EKWELDSTSGYYYNESNGFYYDS+SGFYYSDAIGKWVTQEEAHSSPQFFL+SKHKKP+L KPSSASAS AIK+KNVDKGE GP PGLVVSASLNPKRS+
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSSIAVGKRKRPDEKQKA+SEEEKAALKAREAAKKRVEKREKPLLGLY+LP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

A0A1S3BZS9 uncharacterized protein C18H10.071.4e-12391.73Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNV K+LANMRKENAAKDKEQKEAVRA+EQIEAKAN SYQKD+AN REARDSHALPVDV E G
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        +EKWELDSTSGYYYNESNGFYYDS+SGFYYSDAIGKWVTQEEAHSSPQFFL+SKHKKP+L  PSSASAS AIK+KNVDK E GP PGLVVSASLNPKRSV
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSSIAVGKRKRPDEKQKA+SEEEKAALKAREAAKKRVEKREKPLLGLY+LP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

A0A6J1C616 zinc finger protein ZOP17.8e-12289.76Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAK+KEQKEAVRA+EQIEAKA  SYQKD+AN R+ARDSHALPVDV ENG
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        EEKWE DSTSGYYYNESNGFYYDS+SGFYY DA+GKWVTQEEAH+SPQFF N KHKKP+LEKPSSASASAA+K+KNVDKGESGP PGLVVSASLNP RSV
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSS+AVGKRKRPD KQK +S+EEKAALKAREAAKKRVE+REKPLLGLYKLP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

A0A6J1GM42 zinc finger protein ZOP12.1e-12292.52Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELG+RHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKA  SYQKD+AN REARDSHALPVDV EN 
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        EEKWELDST+GYYYNESNGFYYDS+SGFYYSDAIGKWVTQEEAH+SPQFFLNSKHKKPVLE PSSASASAAIK+KNVDKGESGP PGLVVSAS  PKRSV
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSSIAVGKRKRP+EKQK +SEEEKAALKAREAAKKRVE+REKPLLGLYKLP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

A0A6J1I626 zinc finger protein ZOP17.8e-12292.13Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELG+RHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKA  SYQKD+AN REARDSHALPVDV EN 
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
        EEKWELDST+GYYYNESNGFYYDS+SGFYYSDAIGKWVTQEEAH+SPQFFLNSKHKKPVLE PSSASASAA K+KNVDKGESGP PGLVVSAS  PKRSV
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGAPSSIAVGKRKRP+EKQK +SEEEKAALKAREAAKKRVE+REKPLLGLYKLP
Subjt:  KGAPSSIAVGKRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

SwissProt top hitse value%identityAlignment
O75554 WW domain-binding protein 41.4e-1139.76Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANL
        M +YW SQ  K+CD+CK +I++N  ++  HE G+ HK+NVAKR++ +++++  K KE+++A +    +EA A  +YQ+D+  L
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANL

Q5F457 WW domain-binding protein 43.2e-1140.96Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANL
        M +YW SQ  K+CD+CK +I++N  +I  HE G+ HK+NVAKR++ +RK++  K KE++   +    +E  A  +YQ+D+  L
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANL

Q5HZF2 WW domain-binding protein 47.0e-1137.35Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANL
        M +YW SQ  K+CD+CK +I++N  ++  HE G+ HK+NVA++++ +++++  K KE+++A +    +EA A  +YQ+D+  L
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANL

Q61048 WW domain-binding protein 41.8e-1136.73Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHE
        M +YW SQ  K+CD+CK +I++N  ++  HE G+ HK+NVA+R++ +++++  K KE+++A +    +EA A  +YQ+D+  L        LP D+ E
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHE

Q7XA66 Zinc finger protein ZOP12.1e-6857.42Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWC+FCKI+I NNP++IRNH+LG+RH++ V K+L +MR+ +AAKDKE K+  + ++QIEAKA  SYQKD+A  ++   ++  P    E+G
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
           W LDS SGYYYN++NG +YDS SGFYYSD+IG WVTQ+EA+++ +   +S  K P+++KP S+S +             G  PG +V+ASLNPKR+V
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVG--KRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGA SS+ +G  KRKR DEK K VS EEKAALKAREAA+KRVE REKPLLGLY  P
Subjt:  KGAPSSIAVG--KRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

Arabidopsis top hitse value%identityAlignment
AT1G49590.1 C2H2 and C2HC zinc fingers superfamily protein1.5e-6957.42Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG
        MTEYWVSQGNKWC+FCKI+I NNP++IRNH+LG+RH++ V K+L +MR+ +AAKDKE K+  + ++QIEAKA  SYQKD+A  ++   ++  P    E+G
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENG

Query:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV
           W LDS SGYYYN++NG +YDS SGFYYSD+IG WVTQ+EA+++ +   +S  K P+++KP S+S +             G  PG +V+ASLNPKR+V
Subjt:  EEKWELDSTSGYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSV

Query:  KGAPSSIAVG--KRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP
        KGA SS+ +G  KRKR DEK K VS EEKAALKAREAA+KRVE REKPLLGLY  P
Subjt:  KGAPSSIAVG--KRKRPDEKQKAVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP

AT1G49590.2 C2H2 and C2HC zinc fingers superfamily protein2.5e-2755.77Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVD-VHEN
        MTEYWVSQGNKWC+FCKI+I NNP++IRNH+LG+RH++ V K+L +MR+ +AAKDKE K+  + ++QIEAKA  SYQKD+A  ++   ++  P D   EN
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVD-VHEN

Query:  GEEK
          E+
Subjt:  GEEK

AT1G49590.3 C2H2 and C2HC zinc fingers superfamily protein3.2e-2757.89Show/hide
Query:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVD
        MTEYWVSQGNKWC+FCKI+I NNP++IRNH+LG+RH++ V K+L +MR+ +AAKDKE K+  + ++QIEAKA  SYQKD+A  ++   ++  P D
Subjt:  MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAGTATTGGGTTAGCCAAGGTAACAAATGGTGCGACTTCTGCAAAATATTTATTTCAAATAATCCTTCCACAATCCGAAATCACGAGCTCGGTCAACGTCATAA
GGACAATGTTGCCAAAAGGCTTGCAAACATGAGAAAAGAGAATGCTGCCAAGGACAAAGAACAAAAGGAAGCAGTACGTGCCGTTGAGCAGATTGAGGCAAAAGCCAATC
ATAGTTATCAGAAGGACGTAGCAAATTTACGAGAAGCTAGAGATTCTCATGCACTTCCTGTTGATGTTCATGAAAATGGTGAAGAGAAATGGGAGCTTGACAGCACTTCG
GGCTATTATTATAATGAAAGCAATGGTTTTTACTATGATTCAAGTTCAGGCTTCTACTACTCTGATGCCATTGGCAAGTGGGTAACACAGGAAGAGGCACATTCTTCGCC
TCAGTTCTTTTTGAACTCCAAACATAAGAAACCAGTTTTAGAGAAGCCATCATCGGCCTCTGCAAGTGCAGCTATAAAAGAAAAAAATGTGGATAAAGGAGAAAGTGGGC
CTCTGCCTGGGTTGGTTGTTTCAGCTTCTTTAAACCCGAAGCGATCTGTTAAAGGTGCTCCTTCATCAATTGCTGTTGGTAAGAGGAAGAGGCCAGATGAAAAGCAAAAG
GCTGTATCTGAAGAAGAAAAAGCTGCACTCAAAGCAAGGGAGGCTGCGAAGAAGAGGGTTGAAAAAAGGGAGAAGCCACTTCTCGGCCTTTACAAATTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
TATTTTAGGAAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAATGCAAATTCCCATCTCTTCCACCCACCGCTCCGTTGATGCTTGAATTGAATTGATCTACAGCCCGCTT
CTTTCCGAACCCTAATGTCATTGATTCCCCAAAAATCAACGGATCTACTCTTCCACCGCCAGATTTAGGGTTTAAGATTTCTTCTCCTACAATCTTTCTGCTTCAATTTC
CCCCAATTTCTTCGATTTCCAAACATATTACCGCTACACGATTGATAATTACTCCAATATTTCCGTTCAATACAAGTTCCAGTGTGTATACCATTCTGCGAGACGCTTAA
ACATGACTGAGTATTGGGTTAGCCAAGGTAACAAATGGTGCGACTTCTGCAAAATATTTATTTCAAATAATCCTTCCACAATCCGAAATCACGAGCTCGGTCAACGTCAT
AAGGACAATGTTGCCAAAAGGCTTGCAAACATGAGAAAAGAGAATGCTGCCAAGGACAAAGAACAAAAGGAAGCAGTACGTGCCGTTGAGCAGATTGAGGCAAAAGCCAA
TCATAGTTATCAGAAGGACGTAGCAAATTTACGAGAAGCTAGAGATTCTCATGCACTTCCTGTTGATGTTCATGAAAATGGTGAAGAGAAATGGGAGCTTGACAGCACTT
CGGGCTATTATTATAATGAAAGCAATGGTTTTTACTATGATTCAAGTTCAGGCTTCTACTACTCTGATGCCATTGGCAAGTGGGTAACACAGGAAGAGGCACATTCTTCG
CCTCAGTTCTTTTTGAACTCCAAACATAAGAAACCAGTTTTAGAGAAGCCATCATCGGCCTCTGCAAGTGCAGCTATAAAAGAAAAAAATGTGGATAAAGGAGAAAGTGG
GCCTCTGCCTGGGTTGGTTGTTTCAGCTTCTTTAAACCCGAAGCGATCTGTTAAAGGTGCTCCTTCATCAATTGCTGTTGGTAAGAGGAAGAGGCCAGATGAAAAGCAAA
AGGCTGTATCTGAAGAAGAAAAAGCTGCACTCAAAGCAAGGGAGGCTGCGAAGAAGAGGGTTGAAAAAAGGGAGAAGCCACTTCTCGGCCTTTACAAATTGCCTTGAAAT
AGGCTGTTGCTTTCAATTGCGATTGAGCAGATTCGTGTACTGTCAAAGGCCATGTGAAGGGACCCACTCCCTCGTATCCATACAACATAATCTACCTGTTCAGAAACCAA
AGCTTAGACAAGGATAATTGAGAGCATGAATCCTAGATGAACTAATTGTTTGTCAGCTCATCCATCACAAAAGGACTTCAACTGGTTTGTGCTGACTTGTTGTATAGAGT
AATGTAGCAAAGTAAAGCACCATGATTGACCCAACTAGTTGAGGAGATCAAGTTCTGAATTCATATCTTTGTAGCTTCTCAGTTGATGTGAATGTCTAGAATTTTTAAGG
GTTAAATACTCCTTTGTTTTTGTTCTTGGTTTATTTTGTTTTAAAATGTTCATTTTGATTTTTGTATTATATACTTCAGTTTATTTTGGCCCCAATACTTTCTAAAATAA
GTGACTATTTTTTC
Protein sequenceShow/hide protein sequence
MTEYWVSQGNKWCDFCKIFISNNPSTIRNHELGQRHKDNVAKRLANMRKENAAKDKEQKEAVRAVEQIEAKANHSYQKDVANLREARDSHALPVDVHENGEEKWELDSTS
GYYYNESNGFYYDSSSGFYYSDAIGKWVTQEEAHSSPQFFLNSKHKKPVLEKPSSASASAAIKEKNVDKGESGPLPGLVVSASLNPKRSVKGAPSSIAVGKRKRPDEKQK
AVSEEEKAALKAREAAKKRVEKREKPLLGLYKLP