; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G010920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G010920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionATP synthase subunit alpha
Genome locationchr11:19042477..19043402
RNA-Seq ExpressionLsi11G010920
SyntenyLsi11G010920
Gene Ontology termsGO:0006754 - ATP biosynthetic process (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0031090 - organelle membrane (cellular component)
GO:0031967 - organelle envelope (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsIPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
IPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM12440.1 ATP synthase alpha subunit, partial [Fouquieria sp. Anderberg s.n.]5.5e-4766.07Show/hide
Query:  RKGGWLMMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHEL
        R   W M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE 
Subjt:  RKGGWLMMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHEL

Query:  MQTGLKVIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
        MQTGLK +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQ++SR T +SE LYCVYVAIG K ST
Subjt:  MQTGLKVIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

ADL63290.1 Atp1, partial [Reseda alba]5.5e-4769.14Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SEILYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

AEG80493.1 ATPase alpha subunit, partial [Galium aparine]5.5e-4769.14Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SEILYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

AUD38712.1 ATP synthase F1 subunit 1 [Plocama pendula]5.5e-4769.14Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SEILYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

KAF5789979.1 putative ATP synthase, alpha subunit, ATPase, type III secretion system, FliI/YscN [Helianthus annuus]2.5e-4777.7Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVD------VRARVEVKAPEIIERKSMHELMQTGLKVIDDLVPIGRGQRELIIGDQKT
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVD       R RVEVKAP IIERKS+HE MQTGLK +D LVPIGRGQRELIIGD++T
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVD------VRARVEVKAPEIIERKSMHELMQTGLKVIDDLVPIGRGQRELIIGDQKT

Query:  RKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCS
         KTAIAIDTILNQKQM+SR+T +SE LYCVYVAIG K S
Subjt:  RKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCS

TrEMBL top hitse value%identityAlignment
A0A072TFS9 ATP synthase subunit alpha, mitochondrial2.7e-4758.37Show/hide
Query:  SFLLDNIKRV-----GLPRGYQNLKLIKLEGAELTTSRIKARKGGWLMMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV-------
        +F +D I RV     G+PR Y    L +++  EL              +EFAS VK I LNLENENVGI VFGSDT+IKEG+LVKRTGSIVDV       
Subjt:  SFLLDNIKRV-----GLPRGYQNLKLIKLEGAELTTSRIKARKGGWLMMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV-------

Query:  ---------------------RARVEVKAPEIIERKSMHELMQTGLKVIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVY
                             R RVEVKAP IIERKS+HE MQTGLK +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SE LYCVY
Subjt:  ---------------------RARVEVKAPEIIERKSMHELMQTGLKVIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVY

Query:  VAIGHKCST
        VAIG K ST
Subjt:  VAIGHKCST

A0A6A5MZH1 ATP synthase subunit alpha2.7e-4769.14Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK ITLNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SE LYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

E5DK94 ATP synthase subunit alpha (Fragment)2.7e-4769.14Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SEILYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

F8S0A2 ATP synthase subunit alpha (Fragment)2.7e-4769.14Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SEILYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

Q8SIF0 ATP synthase subunit alpha (Fragment)2.7e-4766.07Show/hide
Query:  RKGGWLMMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHEL
        R   W M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE 
Subjt:  RKGGWLMMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHEL

Query:  MQTGLKVIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
        MQTGLK +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQ++SR T +SE LYCVYVAIG K ST
Subjt:  MQTGLKVIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

SwissProt top hitse value%identityAlignment
P05493 ATP synthase subunit alpha, mitochondrial2.7e-4967.9Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        ++EFAS VK I LNLENENVGI VFGSDT+IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SE LYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

P05495 ATP synthase subunit alpha, mitochondrial6.1e-4967.9Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQ++SRAT +SE LYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

P18260 ATP synthase subunit alpha, mitochondrial6.1e-4967.9Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SR+T +SE LYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

P24459 ATP synthase subunit alpha, mitochondrial2.7e-4968.52Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SE LYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

Q01915 ATP synthase subunit alpha, mitochondrial2.7e-4968.52Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK
        M+EFAS VK I LNLENENVGI VFGSDT IKEG+LVKRTGSIVDV                            R RVEVKAP IIERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDV----------------------------RARVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQRELIIGD++T KTAIAIDTILNQKQM+SRAT +SE LYCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein1.7e-4662.96Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDVRA----------------------------RVEVKAPEIIERKSMHELMQTGLK
        M+ FA+ VK + LNLENENVGI VFG DT IKEG+LVKRTGSIVDV A                            RVEVKAP I+ERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDVRA----------------------------RVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQREL+IGD++T KT IAIDTILNQKQ++SRAT +SE +YCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

ATCG00120.1 ATP synthase subunit alpha8.2e-2541.98Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSI--------------------VDVRAR--------VEVKAPEIIERKSMHELMQTGLK
        ++EF      I LNLE+ NVG+ + G    I+EG+ VK TG I                    +D R +        +E  AP II R+S++E +QTGL 
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSI--------------------VDVRAR--------VEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         ID ++PIGRGQRELIIGD++T KTA+A DTILNQ         + + + CVYVAIG K S+
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST

ATMG01190.1 ATP synthase subunit 11.1e-4562.35Show/hide
Query:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDVRA----------------------------RVEVKAPEIIERKSMHELMQTGLK
        M+ FA+ VK + LNLENENVGI VFG DT IKEG+LVKRTGSIVDV A                            RVEVKAP I+ERKS+HE MQTGLK
Subjt:  MMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDVRA----------------------------RVEVKAPEIIERKSMHELMQTGLK

Query:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST
         +D LVPIGRGQREL+IG ++T KT IAIDTILNQKQ++SRAT +SE +YCVYVAIG K ST
Subjt:  VIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTCACATCACATTAGTCATTCATTCCTTCTAGATAACATAAAACGTGTAGGCCTACCGAGAGGGTATCAAAATCTGAAATTAATCAAACTAGAGGGAGCAGAGCTTAC
TACTAGTAGAATAAAAGCCAGGAAAGGGGGTTGGCTGATGATGGAATTTGCCAGTAGTGTAAAAGAAATAACCTTAAATCTTGAGAATGAGAATGTAGGGATTGCTGTCT
TTGGTAGTGATACCAATATTAAAGAAGGAAATCTTGTCAAGCGCACTGGATCGATTGTGGATGTTCGGGCACGTGTCGAAGTGAAAGCCCCTGAGATTATTGAACGTAAA
TCAATGCACGAGCTTATGCAAACAGGGTTAAAAGTGATAGATGACCTGGTTCCTATAGGTCGTGGCCAACGGGAACTTATAATCGGGGACCAAAAAACTAGAAAAACAGC
TATAGCTATCGATACCATATTAAACCAAAAGCAAATGGATTCAAGGGCCACCTTTAAGAGTGAGATATTGTATTGTGTCTATGTAGCGATTGGACATAAATGCTCAACT
mRNA sequenceShow/hide mRNA sequence
GTTTCACATCACATTAGTCATTCATTCCTTCTAGATAACATAAAACGTGTAGGCCTACCGAGAGGGTATCAAAATCTGAAATTAATCAAACTAGAGGGAGCAGAGCTTAC
TACTAGTAGAATAAAAGCCAGGAAAGGGGGTTGGCTGATGATGGAATTTGCCAGTAGTGTAAAAGAAATAACCTTAAATCTTGAGAATGAGAATGTAGGGATTGCTGTCT
TTGGTAGTGATACCAATATTAAAGAAGGAAATCTTGTCAAGCGCACTGGATCGATTGTGGATGTTCGGGCACGTGTCGAAGTGAAAGCCCCTGAGATTATTGAACGTAAA
TCAATGCACGAGCTTATGCAAACAGGGTTAAAAGTGATAGATGACCTGGTTCCTATAGGTCGTGGCCAACGGGAACTTATAATCGGGGACCAAAAAACTAGAAAAACAGC
TATAGCTATCGATACCATATTAAACCAAAAGCAAATGGATTCAAGGGCCACCTTTAAGAGTGAGATATTGTATTGTGTCTATGTAGCGATTGGACATAAATGCTCAACT
Protein sequenceShow/hide protein sequence
VSHHISHSFLLDNIKRVGLPRGYQNLKLIKLEGAELTTSRIKARKGGWLMMEFASSVKEITLNLENENVGIAVFGSDTNIKEGNLVKRTGSIVDVRARVEVKAPEIIERK
SMHELMQTGLKVIDDLVPIGRGQRELIIGDQKTRKTAIAIDTILNQKQMDSRATFKSEILYCVYVAIGHKCST