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Lsi11G011150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:19545778..19546319
RNA-Seq ExpressionLsi11G011150
SyntenyLsi11G011150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK04585.1 hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa]6.4e-1448.6Show/hide
Query:  NEDLDKQRTEPNKGKKSKRPRTTIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREVMEKSLFSDS
        + D DK+++    GKK KRPR+   T ERR+SDRTLVKTSWRFAKSFSMDLT   SD+EE+E +A   +                  ERE+ E S   D+
Subjt:  NEDLDKQRTEPNKGKKSKRPRTTIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREVMEKSLFSDS

Query:  LHHNNRD
        LHH+N D
Subjt:  LHHNNRD
TrEMBL top hitse value%identityAlignment
A0A5D3BZI8 Uncharacterized protein3.1e-1448.6Show/hide
Query:  NEDLDKQRTEPNKGKKSKRPRTTIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREVMEKSLFSDS
        + D DK+++    GKK KRPR+   T ERR+SDRTLVKTSWRFAKSFSMDLT   SD+EE+E +A   +                  ERE+ E S   D+
Subjt:  NEDLDKQRTEPNKGKKSKRPRTTIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREVMEKSLFSDS

Query:  LHHNNRD
        LHH+N D
Subjt:  LHHNNRD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCTATTTGTGGGTCTAAAAGCTTGCTACATTTTCCATAATGAAGATTTGGATAAGCAAAGAACTGAACCAAACAAGGGTAAGAAGTCAAAAAGACCTCGTACTACAAT
ACCGACATTTGAACGACGACAATCTGATCGCACCTTGGTGAAAACGTCTTGGAGATTTGCAAAGTCGTTTAGTATGGACTTAACCAATATGGCCAGTGACGAGGAGGAGG
ATGAGGACCAAGCTGCTTGTTCAAAAAATGTAAAAAGGAAGATAGCAAATGAACTAGATAATGTTGTGAAGGCTAGTGTAGAGAGAGAGGTTATGGAAAAATCTCTTTTT
TCTGACTCACTTCACCACAACAATAGGGATCCTTCACTGTTACTACTCCACTTCATTCACGTGTCAATGAAATTGTTTGTCCCGAGCCAAAAAGACCACAAATTAACCCA
TTAG
mRNA sequenceShow/hide mRNA sequence
GTTCTATTTGTGGGTCTAAAAGCTTGCTACATTTTCCATAATGAAGATTTGGATAAGCAAAGAACTGAACCAAACAAGGGTAAGAAGTCAAAAAGACCTCGTACTACAAT
ACCGACATTTGAACGACGACAATCTGATCGCACCTTGGTGAAAACGTCTTGGAGATTTGCAAAGTCGTTTAGTATGGACTTAACCAATATGGCCAGTGACGAGGAGGAGG
ATGAGGACCAAGCTGCTTGTTCAAAAAATGTAAAAAGGAAGATAGCAAATGAACTAGATAATGTTGTGAAGGCTAGTGTAGAGAGAGAGGTTATGGAAAAATCTCTTTTT
TCTGACTCACTTCACCACAACAATAGGGATCCTTCACTGTTACTACTCCACTTCATTCACGTGTCAATGAAATTGTTTGTCCCGAGCCAAAAAGACCACAAATTAACCCA
TTAG
Protein sequenceShow/hide protein sequence
VLFVGLKACYIFHNEDLDKQRTEPNKGKKSKRPRTTIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREVMEKSLF
SDSLHHNNRDPSLLLLHFIHVSMKLFVPSQKDHKLTH