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Lsi11G011230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionOxidative stress 3
Genome locationchr11:19662754..19664742
RNA-Seq ExpressionLsi11G011230
SyntenyLsi11G011230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033797.1 hypothetical protein E6C27_scaffold142G00550 [Cucumis melo var. makuwa]1.8e-3592.86Show/hide
Query:  MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEI-HVPPFHSRRVSSHCSIPFFAT
        MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEI +VPPFH RR SSHCS+PF AT
Subjt:  MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEI-HVPPFHSRRVSSHCSIPFFAT

KAG6572054.1 hypothetical protein SDJN03_28782, partial [Cucurbita argyrosperma subsp. sororia]8.5e-2586.36Show/hide
Query:  KRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHSRRVSSHCSIPFF
        +RGLSRYYSGK+RSFACIADVR VEDLKKPKHP+AKKRKK SDCKEIHVPP+H RR+SS CSIPFF
Subjt:  KRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHSRRVSSHCSIPFF

KAG6588432.1 hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3382.42Show/hide
Query:  MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHSRRVSS-HCSIPFFAT
        M+D+GN MMAFDM SL  NLPQKRGLSRYYSGKARSFACIAD R VEDLKKP HPDAKKRKKHSDCK IHV P H RR SS HCSIPFFA+
Subjt:  MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHSRRVSS-HCSIPFFAT

KAG7022280.1 hypothetical protein SDJN02_16011, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-2381.94Show/hide
Query:  LPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHSRRVSS-HCSIPFFAT
        L  +RGLSRYYSGKARSFACIAD R VEDLKKP HPDAKKRKKHSDCK IHV P H RR SS HCSIPFFA+
Subjt:  LPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHSRRVSS-HCSIPFFAT

KGN43154.1 hypothetical protein Csa_020555 [Cucumis sativus]1.8e-3891.3Show/hide
Query:  MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKE--IHVPPFHSRRVSSHCSIPFFAT
        MEDKGN+MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSD KE  I+VPPFH RRVSSHCS+PF AT
Subjt:  MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKE--IHVPPFHSRRVSSHCSIPFFAT

TrEMBL top hitse value%identityAlignment
A0A061E0R1 Uncharacterized protein1.5e-2270.79Show/hide
Query:  MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHV-PPFHSRRVSS--HCSIP
        MED+     AFDMG+LR+NLPQKRGLSRYYSGKARSFACIADVR VEDLKK +HPDAKKRKK+S+ KE+ +  P+  RRVSS  HC+ P
Subjt:  MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHV-PPFHSRRVSS--HCSIP

A0A0A0K2B1 Uncharacterized protein8.5e-3991.3Show/hide
Query:  MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKE--IHVPPFHSRRVSSHCSIPFFAT
        MEDKGN+MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSD KE  I+VPPFH RRVSSHCS+PF AT
Subjt:  MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKE--IHVPPFHSRRVSSHCSIPFFAT

A0A540N5I5 Uncharacterized protein6.5e-2369.32Show/hide
Query:  KGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHV---PPFHSRRVSS--HCSIP
        +G  M AFDMG+LRT LPQKRGLSRYYSGK+RSF C+ADVRSVEDLKKP++PDAKKRKKHS+ K   V   PP+  RRVSS   C+ P
Subjt:  KGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHV---PPFHSRRVSS--HCSIP

A0A5A7SX13 Uncharacterized protein8.8e-3692.86Show/hide
Query:  MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEI-HVPPFHSRRVSSHCSIPFFAT
        MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEI +VPPFH RR SSHCS+PF AT
Subjt:  MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEI-HVPPFHSRRVSSHCSIPFFAT

M5VHW2 Uncharacterized protein1.9e-2269.66Show/hide
Query:  KGNTMMAFDMGSLRTNLPQKR-GLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHV---PPFHSRRVSS--HCSIP
        +G+ M AFDMG+LRTNLPQKR GLSRYYSGK+RSF C+ DVRSVEDLKKP+HPDAKKRKKHS+ K   V   PP+  RRVSS   C+ P
Subjt:  KGNTMMAFDMGSLRTNLPQKR-GLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHV---PPFHSRRVSS--HCSIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03170.1 unknown protein1.0e-0440Show/hide
Query:  KRGLSRYYSGKARSFACIADVRSVEDLKKPKHP---DAKKRKKHSDCKEI
        +RGLS++Y GK++SF  +A+  +VEDL KP++P     K+R++   C+ +
Subjt:  KRGLSRYYSGKARSFACIADVRSVEDLKKPKHP---DAKKRKKHSDCKEI

AT5G21940.1 unknown protein3.0e-0436.84Show/hide
Query:  MGSLRTNLPQKRGLSRYYSGKARSF--------ACIADVRSVEDLKKPKHPDAKKRK
        M SL   LP ++G+S+YYSGK++SF        + +    S++DL KP++P +++R+
Subjt:  MGSLRTNLPQKRGLSRYYSGKARSF--------ACIADVRSVEDLKKPKHPDAKKRK

AT5G24890.1 unknown protein7.2e-0637.5Show/hide
Query:  MGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHS
        M SL  +LP KRGLS +Y GK++SF  + ++ SV+++ K ++P   KR++   C ++    F+S
Subjt:  MGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHS

AT5G56550.1 oxidative stress 35.5e-0650Show/hide
Query:  DMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKK
        D+  L ++LP KRGLS++Y GK++SF  + +V+S+EDL K
Subjt:  DMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATAAAGGAAACACCATGATGGCTTTTGATATGGGTTCTCTTAGAACAAATCTTCCTCAAAAGAGGGGTTTGTCAAGGTATTATTCTGGAAAAGCAAGATCATT
TGCTTGCATAGCTGATGTTCGAAGTGTAGAAGATTTGAAGAAACCAAAACATCCTGATGCTAAGAAAAGGAAGAAACATTCTGATTGCAAAGAAATTCATGTCCCTCCTT
TTCATTCTCGACGAGTTTCTTCTCATTGTTCCATTCCCTTCTTTGCCACTTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTTTCTCTCTTTTAATTGCAAAAATGGAAGATAAAGGAAACACCATGATGGCTTTTGATATGGGTTCTCTTAGAACAAATCTTCCTCAAAAGAGGGGTTTGTC
AAGGTATTATTCTGGAAAAGCAAGATCATTTGCTTGCATAGCTGATGTTCGAAGTGTAGAAGATTTGAAGAAACCAAAACATCCTGATGCTAAGAAAAGGAAGAAACATT
CTGATTGCAAAGAAATTCATGTCCCTCCTTTTCATTCTCGACGAGTTTCTTCTCATTGTTCCATTCCCTTCTTTGCCACTTGAATATAAATAATTCTCCTCCAACAATAT
CATTTTGTAATTTTGTTTTTCGAGTCGTGATTCATATCTCTCTGACGTTTTAGTCGAACGGATGATACCGTAAACTCTAGTTGAGCTATGTTGATCGATGATGTTATATA
TAGCTCTCTGTTGATGATTTTCTTAATGTGTTAATTAACAGATCGTATGTTGAAATGTGTATGATTGACTTCGAGTTGTCTATATATTTAATTATAAATGCAACTCTTCT
CGATATTTTTAAGTTAAATTATATAAAATATTCCTGAGTTTTGAGATGTTTC
Protein sequenceShow/hide protein sequence
MEDKGNTMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEIHVPPFHSRRVSSHCSIPFFAT