; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G011250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionchromatin remodeling protein SHL-like
Genome locationchr11:19679215..19684307
RNA-Seq ExpressionLsi11G011250
SyntenyLsi11G011250
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0035067 - negative regulation of histone acetylation (biological process)
GO:2000028 - regulation of photoperiodism, flowering (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
GO:0035064 - methylated histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001025 - Bromo adjacent homology (BAH) domain
IPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR019786 - Zinc finger, PHD-type, conserved site
IPR019787 - Zinc finger, PHD-finger
IPR043151 - Bromo adjacent homology (BAH) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448075.2 PREDICTED: chromatin remodeling protein SHL-like [Cucumis melo]1.3e-11798.56Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRG NVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHF+CESCSSEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TSKVAETK
Subjt:  TSKVAETK

XP_011658548.1 chromatin remodeling protein SHL [Cucumis sativus]2.8e-11798.08Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLDHF+CESCSSEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TSKVAETK
Subjt:  TSKVAETK

XP_022135772.1 chromatin remodeling protein SHL-like [Momordica charantia]5.9e-11595.19Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTI+AGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKE+FLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFK+YTKLDAVGNDDYFCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMT EEAKKLDHFFCESCSSEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TS++AETK
Subjt:  TSKVAETK

XP_022924958.1 chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata]8.6e-11495.67Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFKNYTKLDAVGN+DYF RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+AE+AKKLDHFFCESCS EGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TSK+AETK
Subjt:  TSKVAETK

XP_038889039.1 chromatin remodeling protein SHL-like [Benincasa hispida]3.4e-11899.04Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAF+PDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TSKVAETK
Subjt:  TSKVAETK

TrEMBL top hitse value%identityAlignment
A0A0A0K4E7 Uncharacterized protein1.4e-11798.08Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCE+CSDWFHPACIEMT EEAKKLDHF+CESCSSEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TSKVAETK
Subjt:  TSKVAETK

A0A1S3BJS6 chromatin remodeling protein SHL-like6.2e-11898.56Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRG NVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHF+CESCSSEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TSKVAETK
Subjt:  TSKVAETK

A0A6J1C3P9 chromatin remodeling protein SHL-like2.9e-11595.19Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTI+AGDCVLMRPSEPSKPSYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKE+FLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFK+YTKLDAVGNDDYFCRF+YNS+TGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMT EEAKKLDHFFCESCSSEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TS++AETK
Subjt:  TSKVAETK

A0A6J1EAH8 chromatin remodeling protein SHL-like isoform X14.1e-11495.67Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVHTFKNYTKLDAVGN+DYF RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+AE+AKKLDHFFCESCS EGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TSK+AETK
Subjt:  TSKVAETK

A0A6J1IJS1 chromatin remodeling protein SHL-like isoform X12.1e-11394.31Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRP EPSKPSYVAKIEKIEADSRGANVKVH+RWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        CTVH+FK+YTKLDAVGN+DYFCRFDY+STTGAFNPDRVAVYCKCEMPYNPDDLMVQCESC+DWFHPACIEMTAEEAKKLDHFFCESCSSE Q KLQ+SQS
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETKAFL
        TSK AETK FL
Subjt:  TSKVAETKAFL

SwissProt top hitse value%identityAlignment
F4JGB7 Chromatin remodeling protein At4g042602.5e-6360.8Show/hide
Query:  GDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFD
        GDCVLMRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG +DY+C FD
Subjt:  GDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFD

Query:  YNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSQSTSKVAETKAFLPHLVGTVGGYK
        Y + TGAF PDRVAVY KCEMPYN D+LM +   C    H AC+ +T EEAKKL+HF C  CSS  +G K+ QN  ++S   + K     ++     Y+
Subjt:  YNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSQSTSKVAETKAFLPHLVGTVGGYK

F4JL28 Chromatin remodeling protein EBS3.5e-8670.14Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSQS
         VHTFKNYT+L+ VG +DY+CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDHF C  CSS+   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSQS

Query:  TSKVAETKAFL
        +S   + K  L
Subjt:  TSKVAETKAFL

Q3UHR0 BAH and coiled-coil domain-containing protein 15.4e-1033.58Show/hide
Query:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL--
        + R  +T++ GDC V +    P+ P Y+ +IE +  +S G+N+ V V+W+Y PEE+  G+RQ  G   L+ S H D     TI  KC V   + Y ++  
Subjt:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL--

Query:  ---DAVGNDDYFCRFDYNSTTGAF-NPDRVAVYC
                D Y+    Y+ TTG     D V V C
Subjt:  ---DAVGNDDYFCRFDYNSTTGAF-NPDRVAVYC

Q9FEN9 Chromatin remodeling protein SHL1.1e-8771.63Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        C VH+F +YTKLD+VGNDD+FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T EEAKK D+F+CE CS + Q+ L NS S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TS   + K
Subjt:  TSKVAETK

Q9P281 BAH and coiled-coil domain-containing protein 12.4e-1032.84Show/hide
Query:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDA
        + R  +T++ GDC V +    P+ P Y+ +IE +  +S G+N+ V V+W+Y PEE+  G+RQ  G   L+ S H D     TI  KC V   + Y ++  
Subjt:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDA

Query:  V-----GNDDYFCRFDYNSTTGAF-NPDRVAVYC
                D Y+    Y+ TTG     D V + C
Subjt:  V-----GNDDYFCRFDYNSTTGAF-NPDRVAVYC

Arabidopsis top hitse value%identityAlignment
AT4G04260.1 Bromo-adjacent homology (BAH) domain-containing protein5.3e-6159.79Show/hide
Query:  MRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTT
        MRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG +DY+C FDY + T
Subjt:  MRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSTT

Query:  GAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSQSTSKVAETKAFLPHLVGTVGGYK
        GAF PDRVAVY KCEMPYN D+LM +   C    H AC+ +T EEAKKL+HF C  CSS  +G K+ QN  ++S   + K     ++     Y+
Subjt:  GAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSS--EGQKKLQNSQSTSKVAETKAFLPHLVGTVGGYK

AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein2.5e-8770.14Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSQS
         VHTFKNYT+L+ VG +DY+CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDHF C  CSS+   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSQS

Query:  TSKVAETKAFL
        +S   + K  L
Subjt:  TSKVAETKAFL

AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein3.3e-8770.67Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSQS
         VHTFKNYT+L+ VG +DY+CRF+Y + TGAF PDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ MT EEAKKLDHF C  CSS+   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQ-KKLQNSQS

Query:  TSKVAETK
        +S   + K
Subjt:  TSKVAETK

AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein7.8e-8971.63Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS
        C VH+F +YTKLD+VGNDD+FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T EEAKK D+F+CE CS + Q+ L NS S
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQS

Query:  TSKVAETK
        TS   + K
Subjt:  TSKVAETK

AT4G39100.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein3.8e-7576.07Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDW
        C VH+F +YTKLD+VGNDD+FCRF+YNSTTGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+W
Subjt:  CTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAACCCAAGGCTCCGAGACAAACCCTAGATTCTTACACTGTCAAACGCATCAACAAAACCATTAAAGCCGGCGATTGCGTGCTTATGAGGCCCTCCGAACCCTC
GAAGCCGTCGTATGTTGCTAAGATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCAATTGGCGGTC
GTAGACAGTTTCATGGCTCGAAGGAGTTGTTTCTCTCCGACCATTATGACGTTCAAAGCGCCGACACCATCGAGGGCAAGTGTACGGTGCATACGTTTAAGAATTATACC
AAGCTTGATGCCGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTGTATTGCAAGTGTGAGATGCC
TTATAATCCCGACGACCTAATGGTTCAATGTGAGAGCTGCAGTGATTGGTTTCATCCTGCTTGTATTGAAATGACTGCAGAAGAAGCTAAAAAACTTGACCACTTCTTCT
GTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAGTTGCAGAGACAAAGGCATTTCTTCCTCATTTGGTTGGTACTGTAGGTGGA
TACAAAACGACGCCGGAGGTGACGATAGTGTAA
mRNA sequenceShow/hide mRNA sequence
AAGGTAGGTGTAGCCCAACTCTAATTAGTAAAAATAAAATTTTTACAAAATCAAAAAGAAAAAAAAAGTGGAAAAAAAAATCTTCACCAATGACTGTTACAAAAATCTGC
CCTCATTTGCTCCACCGTCGCTTAGTAATATTGGCTTTGGCATATGCCGCCACGTGACAACCAAATCCACTCCTCCGCCGGACATTTTCCCCTTTTCACTGCCACCGATC
ACCCTGCAGGGCTCCTTTTTCATGGCCAAACCCAAGGCTCCGAGACAAACCCTAGATTCTTACACTGTCAAACGCATCAACAAAACCATTAAAGCCGGCGATTGCGTGCT
TATGAGGCCCTCCGAACCCTCGAAGCCGTCGTATGTTGCTAAGATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGC
CGGAGGAATCAATTGGCGGTCGTAGACAGTTTCATGGCTCGAAGGAGTTGTTTCTCTCCGACCATTATGACGTTCAAAGCGCCGACACCATCGAGGGCAAGTGTACGGTG
CATACGTTTAAGAATTATACCAAGCTTGATGCCGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCACTACTGGAGCTTTCAATCCCGATCGAGTGGCTGT
GTATTGCAAGTGTGAGATGCCTTATAATCCCGACGACCTAATGGTTCAATGTGAGAGCTGCAGTGATTGGTTTCATCCTGCTTGTATTGAAATGACTGCAGAAGAAGCTA
AAAAACTTGACCACTTCTTCTGTGAAAGTTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAGTTGCAGAGACAAAGGCATTTCTTCCTCAT
TTGGTTGGTACTGTAGGTGGATACAAAACGACGCCGGAGGTGACGATAGTGTAAATAAACAAAATACGGTGACTTAGAGTTGTTAAGAACCAACCAGAGCTTCTAACTTT
CTAATGAGTTGGAACAAGTGCATAGATGTAGGATAATGTAAATACTAGCTCTAGTGTGTTCAACATTCATTGAAGCAAGTAGAGAGATTGGTTTGAAATGTATTGAAGTT
ATTTTATCTCAAATGGAGCAAACCAAACCAAAGCCCCCCTTTCTTCTGTGAAGGTTGCAAATTTGTTTCATTTCCTCAAAACTCCTAAATTTTTAACTGTTTTGGAATCC
ATTTTTCTAATTATTCTTAGCTGATGCTGATGTATAGGTGAAATATCTGTCAAGAACAGTAGGAAAGAGATTTTTATGTAATTATTTGGTTGCAAGTTAATTGGACTGGG
CTTCATTAGACTGGCTACTTATTGTGTCCCAACCTTTCCCTTGTAGAAGTTTTAGTTGGATTTTGATTGCTCCATGTTCCTTTTTATTTCTCATCAAATAAATGACATCT
TCTTCTCG
Protein sequenceShow/hide protein sequence
MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYT
KLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKKLQNSQSTSKVAETKAFLPHLVGTVGG
YKTTPEVTIV