; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G011340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCRM domain-containing protein
Genome locationchr11:19803691..19806585
RNA-Seq ExpressionLsi11G011340
SyntenyLsi11G011340
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148536.1 uncharacterized protein LOC101213060 [Cucumis sativus]7.1e-11587.27Show/hide
Query:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE
        MGASI SSHSHSLLLRS+PSS STFFSKPS AAAISTVCFHQFKP+SS  LTRESPHH R FT SA LSFSRSFSSTIS PSEVIFDE DDEI+ +DE +
Subjt:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE

Query:  IED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
         ED  E E+ VGDGTETGVASELSS + +RNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
Subjt:  IED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED

Query:  VVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSR
        VVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARK+Y+RKEPDRVKSILQ KI+TPQSSNRGRRG+SR
Subjt:  VVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSR

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]1.9e-11284.29Show/hide
Query:  MGASITS----SHSHSLLLRSVPSSLSTFFSKPSA-AAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYE
        M ASI S    SHSHSLLLRSVPSS STFFSKPSA AA STVCFHQFKP+SS FLTR+SPH+SR FT S SLSFSR FSST+SGPSEV FDE DDEI+ +
Subjt:  MGASITS----SHSHSLLLRSVPSSLSTFFSKPSA-AAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYE

Query:  DEVEIED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DE + ED  E E++VGDGTE GVASELSS + NRNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DEVEIED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY
        +LEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K++TP+SSNRGRRG+SRY
Subjt:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]3.1e-10278.6Show/hide
Query:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD
        MGASI SS S     HSLLLRSVPSSLSTF  +PS A IS  C HQFKPNSS FL R+SPH SRSFT SAS+SFSRSFSS ISG S V F+     ++DD
Subjt:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD

Query:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        E DYEDEVEIEDFE E+  V DG ET VAS+ SS++ +R+EVK+IPSLT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+L
Subjt:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY
        GNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARKIYVRKEPDRVK  LQNK+QTP+SSNRGRRGSSR+
Subjt:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY

XP_023529380.1 uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]4.4e-10176.29Show/hide
Query:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED------
        MGASI SS S     HSLLLRSVPSSLSTF S+PS AAIS  C HQFKPNSS FL R+SPH SRSF+ SAS+SFSRSFSSTIS  S V F+++D      
Subjt:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED------

Query:  -----DEIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
             DE++ EDEVEIEDFE E+  V DG ET VAS+ SS++ +R+EVKNIPSLT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL
Subjt:  -----DEIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANEL

Query:  LKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY
        LKIK+LGNCP ELEDVV++LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARK+YVRKEPDRVK  LQNK+QTP+SSNRGRRGSSR+
Subjt:  LKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY

XP_038888218.1 uncharacterized protein LOC120078082 [Benincasa hispida]3.9e-11386.33Show/hide
Query:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE
        MGASI S HSHSLLLRSVPSS STFFSKPS AAA + VCF+QFKP SSNF TRES HHSRSF  S SLSF RSF+STISGPSE  FDE+DDEI+ EDE +
Subjt:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE

Query:  IED---FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL
         ED    EREEAV DG ETGVASELSS M NRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL
Subjt:  IED---FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL

Query:  EDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY
        ED VRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE++KR+ARKIYVRKE DRVKSILQNKIQTP+SSNRGRRGSSRY
Subjt:  EDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein3.4e-11587.27Show/hide
Query:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE
        MGASI SSHSHSLLLRS+PSS STFFSKPS AAAISTVCFHQFKP+SS  LTRESPHH R FT SA LSFSRSFSSTIS PSEVIFDE DDEI+ +DE +
Subjt:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE

Query:  IED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
         ED  E E+ VGDGTETGVASELSS + +RNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
Subjt:  IED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED

Query:  VVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSR
        VVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARK+Y+RKEPDRVKSILQ KI+TPQSSNRGRRG+SR
Subjt:  VVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSR

A0A1S3BJF7 uncharacterized protein LOC1034903509.3e-11384.29Show/hide
Query:  MGASITS----SHSHSLLLRSVPSSLSTFFSKPSA-AAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYE
        M ASI S    SHSHSLLLRSVPSS STFFSKPSA AA STVCFHQFKP+SS FLTR+SPH+SR FT S SLSFSR FSST+SGPSEV FDE DDEI+ +
Subjt:  MGASITS----SHSHSLLLRSVPSSLSTFFSKPSA-AAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYE

Query:  DEVEIED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DE + ED  E E++VGDGTE GVASELSS + NRNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DEVEIED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY
        +LEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K++TP+SSNRGRRG+SRY
Subjt:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein7.2e-7393.17Show/hide
Query:  ETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVN
        ETGVASELSS + NRNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVN
Subjt:  ETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVN

Query:  QIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY
        QIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K++TP+SSNRGRRG+SRY
Subjt:  QIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY

A0A6J1C409 uncharacterized protein LOC1110077235.9e-6778.38Show/hide
Query:  DYEDEVEIEDFE-REEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGN
        DYE EV I DFE  EE++G  ++    S+LSSS+ N +EVKN+PSLT+KEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL N
Subjt:  DYEDEVEIEDFE-REEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGN

Query:  CPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTP--QSSNRGRRGSSRY
        CP EL+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR+ARKIYVRKEPDRVKSILQNK+QTP   +SNRGRRGSSR+
Subjt:  CPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTP--QSSNRGRRGSSRY

A0A6J1I2Z3 uncharacterized protein LOC1114700601.5e-10278.6Show/hide
Query:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD
        MGASI SS S     HSLLLRSVPSSLSTF  +PS A IS  C HQFKPNSS FL R+SPH SRSFT SAS+SFSRSFSS ISG S V F+     ++DD
Subjt:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD

Query:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        E DYEDEVEIEDFE E+  V DG ET VAS+ SS++ +R+EVK+IPSLT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+L
Subjt:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY
        GNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARKIYVRKEPDRVK  LQNK+QTP+SSNRGRRGSSR+
Subjt:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY7.3e-0633.33Show/hide
Query:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY7.3e-0633.33Show/hide
Query:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY7.3e-0633.33Show/hide
Query:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK7 RNA-binding protein YhbY7.3e-0633.33Show/hide
Query:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI1.2e-0839.33Show/hide
Query:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L NC E+  DV   L + + S +V  IG T+++Y+ S
Subjt:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.2e-3249.03Show/hide
Query:  STVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSR---SFSSTISGPSEVIFDEEDDEIDYEDEVEIEDFEREEAVGDGTETGVASELSSSMANRNEV
        S VC    +P S + L R+S HH+     S+SL   R   SFS  +   S    DE + +   ED V +      E   DG E G  SEL+      N  
Subjt:  STVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSR---SFSSTISGPSEVIFDEEDDEIDYEDEVEIEDFEREEAVGDGTETGVASELSSSMANRNEV

Query:  KNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKA
         +   L+ KEK++LASYAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+KI   CP ELED++ +LEE+TGSV V QI RTVI+YRPS TK+KA
Subjt:  KNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKA

Query:  EEEKRR
        +E+K+R
Subjt:  EEEKRR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein2.0e-3541.1Show/hide
Query:  ASITSSH-SHSLLLRSVPSSLSTFFSKPSAAAIS-TVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED-----DEIDYE
        AS +S+H  H+LL    P S    F +P   + S +   H+ KP   +F ++  P HS S          +SFSS      E   + ED     +E +YE
Subjt:  ASITSSH-SHSLLLRSVPSSLSTFFSKPSAAAIS-TVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED-----DEIDYE

Query:  DEVEIED-----------FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
        DE E ++            E  EA  + +E G   E + +   +    +   L+IKEKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETLE NELL
Subjt:  DEVEIED-----------FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQS---SNRGRRGSSR
        K+KI    P+ELED V+ LEE+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ + +      +      +   S     RGRRG SR
Subjt:  KIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQS---SNRGRRGSSR

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein4.5e-3542.91Show/hide
Query:  ASITSSH-SHSLLLRSVPSSLSTFFSKPSAAAIS-TVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED-----DEIDYE
        AS +S+H  H+LL    P S    F +P   + S +   H+ KP   +F ++  P HS S          +SFSS      E   + ED     +E +YE
Subjt:  ASITSSH-SHSLLLRSVPSSLSTFFSKPSAAAIS-TVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED-----DEIDYE

Query:  DEVEIED-----------FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
        DE E ++            E  EA  + +E G   E + +   +    +   L+IKEKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETLE NELL
Subjt:  DEVEIED-----------FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK
        K+KI    P+ELED V+ LEE+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ + +
Subjt:  KIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTTCGATAACGTCCTCTCACTCTCACTCTCTTCTTCTCCGGTCAGTTCCCTCTTCTTTATCCACCTTCTTCTCTAAACCCTCCGCCGCCGCCATCTCCACCGT
TTGCTTCCATCAATTTAAACCCAACAGTTCAAACTTCCTCACTCGCGAATCTCCTCACCATTCCCGGTCTTTCACTTCCTCCGCATCCCTTTCCTTCTCTCGCTCCTTTT
CCTCCACCATTTCCGGTCCCTCGGAGGTCATATTTGATGAAGAAGACGATGAAATTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACGGGAAGAGGCCGTTGGG
GATGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCTTCATCAATGGCGAATAGAAATGAAGTGAAGAATATTCCGAGCTTGACGATTAAGGAGAAGAAAGAGCTGGCATC
GTATGCTCATAGCTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTC
TCAAGATCAAAATTCTTGGAAACTGTCCAGAGGAACTGGAGGATGTGGTGAGGAAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGCAGAACTGTTATT
ATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAAAAAAGACGAGCCCGAAAAATTTATGTGAGAAAAGAGCCCGATCGAGTCAAATCCATTTTGCAGAATAA
AATACAAACACCCCAGAGCTCGAACCGTGGTCGTCGTGGAAGCAGTAGGTATTGA
mRNA sequenceShow/hide mRNA sequence
GTGAAGCCGAACCAAGAAGAAGGAAGCAAAAATGGGGGCTTCGATAACGTCCTCTCACTCTCACTCTCTTCTTCTCCGGTCAGTTCCCTCTTCTTTATCCACCTTCTTCT
CTAAACCCTCCGCCGCCGCCATCTCCACCGTTTGCTTCCATCAATTTAAACCCAACAGTTCAAACTTCCTCACTCGCGAATCTCCTCACCATTCCCGGTCTTTCACTTCC
TCCGCATCCCTTTCCTTCTCTCGCTCCTTTTCCTCCACCATTTCCGGTCCCTCGGAGGTCATATTTGATGAAGAAGACGATGAAATTGATTACGAAGATGAAGTTGAAAT
CGAAGATTTCGAACGGGAAGAGGCCGTTGGGGATGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCTTCATCAATGGCGAATAGAAATGAAGTGAAGAATATTCCGAGCT
TGACGATTAAGGAGAAGAAAGAGCTGGCATCGTATGCTCATAGCTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCT
TTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTTGGAAACTGTCCAGAGGAACTGGAGGATGTGGTGAGGAAATTGGAGGAATCAACTGGCTCTGT
GGTGGTGAATCAAATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAAAAAAGACGAGCCCGAAAAATTTATGTGAGAAAAGAGC
CCGATCGAGTCAAATCCATTTTGCAGAATAAAATACAAACACCCCAGAGCTCGAACCGTGGTCGTCGTGGAAGCAGTAGGTATTGATCTGAAGTAGGATTCACATCTAGC
AGGCTTGTTTTGGAGGAACAGATTTTGAATTTTCATCCCAATGTTTAGAGATTAAACAAGAGATTATAGGGTGTGTGAGAGAGTTAGTAGGAGGAGCTCAAACTAATTAA
CATGGAATATGAGAGCCTCAGAAGATGAAGACATTGGACTGTTATTATATCTCATAACTCCAAATGTGAGTTTAGTTCTATGAATTCATCTTTCATATGAAAAAATATTA
AATATTAAAACATTATATTTGGGGAAATTATAATAGATTCTTTTGGGATTGATCATTAGAGAGAGGGGGGAAAAATCAATTTTGACACTTGAACTTAGACTATAGTCCTA
AAGCTTCGATTAATAATCGTTTGGCTTTTGAAAATTATTAAGCTTTTAAACTCT
Protein sequenceShow/hide protein sequence
MGASITSSHSHSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVEIEDFEREEAVG
DGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVI
IYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQNKIQTPQSSNRGRRGSSRY