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Lsi11G011400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description30S ribosomal protein S31, mitochondrial
Genome locationchr11:19919806..19920072
RNA-Seq ExpressionLsi11G011400
SyntenyLsi11G011400
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448047.1 PREDICTED: 30S ribosomal protein S31, mitochondrial [Cucumis melo]1.5e-3792.05Show/hide
Query:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MAMAQWCGAVA+GV+AAERRSPSLTSSMAVEGLVPILCGRGDKKTK+GK FKGSYGNARPKKEKKI+RIKDK+EVP STPWPLPFKLI
Subjt:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

XP_022933003.1 30S ribosomal protein S31, mitochondrial [Cucurbita moschata]1.6e-3996.59Show/hide
Query:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MAM QWCGAVA+GVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDK+EVPSSTPWPLPFKLI
Subjt:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

XP_022952601.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita moschata]2.9e-3896.51Show/hide
Query:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MAQWCGA+AK VMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDK+EVPSSTPWPLPFKLI
Subjt:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

XP_022969451.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita maxima]1.9e-3795.35Show/hide
Query:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MAQWCGA+AK VMAAERRSPS TSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDK+EVPSSTPWPLPFKLI
Subjt:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

XP_022971575.1 30S ribosomal protein S31, mitochondrial [Cucurbita maxima]1.5e-3795.35Show/hide
Query:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        M QWCGAVA+GVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDK EVPSSTPWPLPFKLI
Subjt:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

TrEMBL top hitse value%identityAlignment
A0A1S3BI88 30S ribosomal protein S31, mitochondrial7.0e-3892.05Show/hide
Query:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MAMAQWCGAVA+GV+AAERRSPSLTSSMAVEGLVPILCGRGDKKTK+GK FKGSYGNARPKKEKKI+RIKDK+EVP STPWPLPFKLI
Subjt:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

A0A5A7SX60 30S ribosomal protein S317.0e-3892.05Show/hide
Query:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MAMAQWCGAVA+GV+AAERRSPSLTSSMAVEGLVPILCGRGDKKTK+GK FKGSYGNARPKKEKKI+RIKDK+EVP STPWPLPFKLI
Subjt:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

A0A6J1F3E9 30S ribosomal protein S31, mitochondrial7.5e-4096.59Show/hide
Query:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MAM QWCGAVA+GVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDK+EVPSSTPWPLPFKLI
Subjt:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

A0A6J1GKP4 30S ribosomal protein S31, mitochondrial-like1.4e-3896.51Show/hide
Query:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MAQWCGA+AK VMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDK+EVPSSTPWPLPFKLI
Subjt:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

A0A6J1I644 30S ribosomal protein S31, mitochondrial7.0e-3895.35Show/hide
Query:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        M QWCGAVA+GVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDK EVPSSTPWPLPFKLI
Subjt:  MAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic3.8e-0451.11Show/hide
Query:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTP
        + CGRGD+KT KGK F  S+GNARP+ + K  R  ++V VP + P
Subjt:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTP

P47909 30S ribosomal protein S31, mitochondrial2.9e-2084.91Show/hide
Query:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        + CGRGDKKTK+GK FKGSYGNARPK+EKKI+RIKD+VEVP STPWPLPFKLI
Subjt:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

P47910 30S ribosomal protein S31, chloroplastic2.6e-0548.15Show/hide
Query:  GVMAAERRSPSLTSSMAVEGLVPIL-CGRGDKKTKKGKIFKGSYGNARPKKEKK
        GV  +   + SL+SS++    +P++ CGRGD+KT KGK F  S+GNARPK + K
Subjt:  GVMAAERRSPSLTSSMAVEGLVPIL-CGRGDKKTKKGKIFKGSYGNARPKKEKK

Q9SJU8 30S ribosomal protein S31, mitochondrial9.5e-2458.16Show/hide
Query:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MA  QWCGA+ + +M  +R S +L  S     L P           LCGRGDKKTKKGK FKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein6.8e-2558.16Show/hide
Query:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI
        MA  QWCGA+ + +M  +R S +L  S     L P           LCGRGDKKTKKGK FKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI

AT2G38140.1 plastid-specific ribosomal protein 42.7e-0551.11Show/hide
Query:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTP
        + CGRGD+KT KGK F  S+GNARP+ + K  R  ++V VP + P
Subjt:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGCGCAGTGGTGCGGCGCAGTAGCTAAGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCCATGGCGGTCGAAGGACTGGTGCCGATCCT
CTGTGGACGAGGTGACAAGAAGACGAAGAAAGGGAAAATATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAGTTG
AGGTTCCTAGTTCCACTCCTTGGCCTCTTCCTTTCAAGCTCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGGCGCAGTGGTGCGGCGCAGTAGCTAAGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCCATGGCGGTCGAAGGACTGGTGCCGATCCT
CTGTGGACGAGGTGACAAGAAGACGAAGAAAGGGAAAATATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAGTTG
AGGTTCCTAGTTCCACTCCTTGGCCTCTTCCTTTCAAGCTCATCTGA
Protein sequenceShow/hide protein sequence
MAMAQWCGAVAKGVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKVEVPSSTPWPLPFKLI