; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G011540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive protein
Genome locationchr11:20083224..20083682
RNA-Seq ExpressionLsi11G011540
SyntenyLsi11G011540
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572078.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]5.4e-7292.76Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSSCRRFVVRATYLNHPIF+KLLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
        VFEEVLRTVSRS+SGRFLNL DF RRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC

XP_004144827.1 indole-3-acetic acid-induced protein ARG7 [Cucumis sativus]1.2e-7194.04Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR  AGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLL QAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSV
        VFEEVLRTVSRS+SGRFLNLQD RRRCHVDSPS LLRESRPLLFDFADKSV
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSV

XP_022952621.1 auxin-induced protein 6B-like [Cucurbita moschata]2.7e-7192.11Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSSCRRFVVRATYLNHPIF+KLLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
        VFEEVLR VSRS+SGRFLNL DF RRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC

XP_023554734.1 auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo]1.2e-7192.76Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSSCRRFVVRATYLNHPIF+KLLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
        VFEEVLRTVSRS+SGRFLNL DF RRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC

XP_038888410.1 indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]2.2e-7898.68Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSG GDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
        VFEEVLRTVSRSDSGRFLN QDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC

TrEMBL top hitse value%identityAlignment
A0A0A0K0H1 Uncharacterized protein5.8e-7294.04Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR  AGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLL QAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSV
        VFEEVLRTVSRS+SGRFLNLQD RRRCHVDSPS LLRESRPLLFDFADKSV
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSV

A0A1S3BJN8 auxin-responsive protein SAUR36-like6.4e-7192.05Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  A DAP+DVPAGHVAICVGSSCRRFVVRAT+LNHPIFQKLLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSV
        VFEEVLR+VSRS+SGRF+NLQD RRRCHVDSPS LLRESRPLLFDFADKSV
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSV

A0A5D3CM24 Auxin-responsive protein SAUR36-like2.2e-7192.72Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  A DAP+DVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSV
        VFEEVLR+VSRS+SGRF+NLQD RRRCHVDSPS LLRESRPLLFDFADKSV
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSV

A0A6J1GKR4 auxin-induced protein 6B-like1.3e-7192.11Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSSCRRFVVRATYLNHPIF+KLLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
        VFEEVLR VSRS+SGRFLNL DF RRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC

A0A6J1I2L6 auxin-induced protein 6B-like1.7e-7191.45Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR   AGD PSDVPAGHVA+CVGSSCRRFVVRATYLNHPIF+KLLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
        VFEEVLRTVSRS+SGRFLNL DF RRCHVDSP+SLLRESRPLLFDFADKSVC
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR403.8e-1250Show/hide
Query:  SDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV
        S VP+GHV + VG    RFVV A  LNHP+F  LL ++ +EYG+T +G L IPC+  VFE+V+ ++
Subjt:  SDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV

O65695 Auxin-responsive protein SAUR502.5e-1136.63Show/hide
Query:  KSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAG----DAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVF
        K++ + +   ++Q+L+      R ++  +++G G      P DVP GH  + VG +  R++V  ++L HP FQ LL +AEEE+GF +   L IPCDE VF
Subjt:  KSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAG----DAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVF

Query:  E
        +
Subjt:  E

P32295 Indole-3-acetic acid-induced protein ARG71.9e-1142.31Show/hide
Query:  SRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTN-QGPLAIPCDESVFEEVLRTVS
        S R+ A     D P G++A+ VG + +RFV+  ++LN P+FQ LL QAEEE+G+ +  G L IPC E +F+ +   +S
Subjt:  SRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTN-QGPLAIPCDESVFEEVLRTVS

Q9SA49 Auxin-responsive protein SAUR411.4e-1151.56Show/hide
Query:  VPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV
        VPAGHV + VG    RFVV A  +NHPIF  LL ++ +EYG+  +G L IPC   VFE V+ T+
Subjt:  VPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV

Q9SGU2 Auxin-responsive protein SAUR715.0e-1251.56Show/hide
Query:  VPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV
        VP GHV + VG    RFVV A  LNHP+F  LL Q+ +EYG+  QG L IPC   VFE +L ++
Subjt:  VPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family6.2e-4255.41Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        M+  + K + IR IV +RQML+RWR KAR+++ SR       PSDVP+GHVA+CVGS CRRFVVRA+YLNHPI   LL+QAEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRF--LNLQDFRRRCH----VDSPSSLLRESRPLLFDFADKSV
        VFEE +R +SRSDS R       D  ++C+    + S   L+ ESRPLL   A+K++
Subjt:  VFEEVLRTVSRSDSGRF--LNLQDFRRRCH----VDSPSSLLRESRPLLFDFADKSV

AT1G75590.1 SAUR-like auxin-responsive protein family5.6e-4357.96Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        M+ G+ K + IR IV +RQML+RWR +AR+++S  R      PSDVP+GHVA+ VGSSCRRFVVRATYLNHP+ + LL+QAEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSD---SGRFLNLQDFRRRCHV---DSPSSLLRESRPLLFDFADKSV
        VFEE +R +SRSD   S RF    DF++ CHV    S   L  ESRPLL    +K+V
Subjt:  VFEEVLRTVSRSD---SGRFLNLQDFRRRCHV---DSPSSLLRESRPLLFDFADKSV

AT4G34750.1 SAUR-like auxin-responsive protein family6.6e-3652.56Show/hide
Query:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEE
        + K+N I  +V IRQML++W+KKA + +S+      D  SDVP GHVA+ VG + RR+VVRA +LNHPIF++LL +AEEEYGF N GPLAIPCDES+FE+
Subjt:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEE

Query:  VLRTVSR----SDSGR----FLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
        ++  V+R    S SGR       L+D RR  HV    + + ESRPLL   A+KSVC
Subjt:  VLRTVSR----SDSGR----FLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC

AT4G34750.2 SAUR-like auxin-responsive protein family6.6e-3652.56Show/hide
Query:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEE
        + K+N I  +V IRQML++W+KKA + +S+      D  SDVP GHVA+ VG + RR+VVRA +LNHPIF++LL +AEEEYGF N GPLAIPCDES+FE+
Subjt:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEE

Query:  VLRTVSR----SDSGR----FLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC
        ++  V+R    S SGR       L+D RR  HV    + + ESRPLL   A+KSVC
Subjt:  VLRTVSR----SDSGR----FLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC

AT5G10990.1 SAUR-like auxin-responsive protein family2.2e-3956.21Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES
        M+ GI K + IR IV +RQML++WR KAR+ +S RRS     PSDVP+GHVA+ VG SCRRFVV ATYLNHPI   LL++AEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRSDSGRFLNLQDFRRRCH--VDSPSSLLRESRPLLFDFADKSV
        VFEE +R ++R  S RF    D ++  H  + S   LL ESRPLL   ++K++
Subjt:  VFEEVLRTVSRSDSGRFLNLQDFRRRCH--VDSPSSLLRESRPLLFDFADKSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATTGTTAGCATCCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGTGTCACCGCCTCTTCTCGCCGCTC
CGGCGCCGGTGATGCTCCGTCGGATGTTCCGGCCGGCCACGTGGCGATCTGTGTAGGAAGCAGTTGCAGAAGGTTCGTGGTTCGAGCTACTTACTTGAACCATCCGATCT
TCCAGAAGCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTTGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACTGTTTCC
CGGTCTGACTCCGGTCGGTTCTTGAATCTTCAGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGC
CGATAAATCGGTTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATTGTTAGCATCCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGTGTCACCGCCTCTTCTCGCCGCTC
CGGCGCCGGTGATGCTCCGTCGGATGTTCCGGCCGGCCACGTGGCGATCTGTGTAGGAAGCAGTTGCAGAAGGTTCGTGGTTCGAGCTACTTACTTGAACCATCCGATCT
TCCAGAAGCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTTGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACTGTTTCC
CGGTCTGACTCCGGTCGGTTCTTGAATCTTCAGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGC
CGATAAATCGGTTTGTTAG
Protein sequenceShow/hide protein sequence
MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVS
RSDSGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC