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Lsi11G011550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationchr11:20101088..20101372
RNA-Seq ExpressionLsi11G011550
SyntenyLsi11G011550
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572079.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4289.9Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKPAALK IVKRCSSLGRKQDA      YD VPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

KAG7011743.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-4289.9Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKPAALK IVKRCSSLGRKQDA      YD VPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_022952665.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.6e-4289.9Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKPAALK IVKRCSSLGRKQDA      YD VPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_022969389.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]7.2e-4390.91Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKPAALK IVKRCSSLGRKQDA      YD VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_038887253.1 auxin-responsive protein SAUR50-like [Benincasa hispida]1.2e-4289Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQDA------PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKPA LKQIVKRCSSLGRKQDA       YD VPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQDA------PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

TrEMBL top hitse value%identityAlignment
A0A0A0K5S8 Uncharacterized protein6.6e-4288.89Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQD-----APYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKP ALKQIVKRCSSLGRKQD       YD VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQD-----APYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A1S3BJD0 auxin-induced protein 15A1.5e-4187.88Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQD-----APYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKP +LKQIVKRCSSLGRKQD       YD VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQD-----APYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A6J1EKI0 auxin-responsive protein SAUR50-like2.1e-4086.14Show/hide
Query:  MTIPKP----AALKQIVKRCSSLGRKQDAP---YDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
        M I KP    AALKQIVKRCSSLGRKQ+A    +DDVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
Subjt:  MTIPKP----AALKQIVKRCSSLGRKQDAP---YDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL

Query:  K
        +
Subjt:  K

A0A6J1GME7 auxin-responsive protein SAUR50-like7.8e-4389.9Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKPAALK IVKRCSSLGRKQDA      YD VPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A6J1I2G2 auxin-responsive protein SAUR50-like3.5e-4390.91Show/hide
Query:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKPAALK IVKRCSSLGRKQDA      YD VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MTIPKPAALKQIVKRCSSLGRKQDA-----PYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR502.3e-3164.29Show/hide
Query:  IPKPAALKQIVKRCSSLGRKQDAPYD------DVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A LKQI+KRCSSLG+K    YD      DVPKGHF VYVG+NRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Subjt:  IPKPAALKQIVKRCSSLGRKQDAPYD------DVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

P0DKL1 Auxin-responsive protein SAUR501.3e-2360.24Show/hide
Query:  ALKQIVKRCSSLGRKQD--APYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
        A+K+I+K+CSS G+  D     +DVPKGHF VYVG+ R+RY+VPIS L HP FQ LL+ +EEEFGF+H MG+ IPC+EV F S
Subjt:  ALKQIVKRCSSLGRKQD--APYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS

P33081 Auxin-induced protein 15A3.0e-1557.58Show/hide
Query:  DVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL
        D PKG+ AVYVG+   R+V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T+ L
Subjt:  DVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL

P33083 Auxin-induced protein 6B3.0e-1547.56Show/hide
Query:  VKRCSSLGRKQDAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHH-HMGLTIPCEEVVFRSLTAAL
        +++ S    +  +   DV KG+ AVYVG+   R+V+P+S L  P FQ LL  AEEEFG+HH + GLTIPC E VF+ +T+ L
Subjt:  VKRCSSLGRKQDAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHH-HMGLTIPCEEVVFRSLTAAL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 102.6e-2760.19Show/hide
Query:  TIPKPAALKQIVKRCSSLGR----------KQDAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA
        T  + A++KQIVKRCSSL +          ++D    DVPKGHF VYVG NRSRY+VPIS L H +FQ LLRLAEEEFGF H MGLTIPC+EV FRSL +
Subjt:  TIPKPAALKQIVKRCSSLGR----------KQDAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA

Query:  ALK
          +
Subjt:  ALK

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family1.4e-3165Show/hide
Query:  IPKPAALKQIVKRCSSLGRKQDAPYDD--------VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A +KQI+KRCSSLG+KQ   Y +        VPKGHF VYVG+NR RYVVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEEVVFRSLT+ L+
Subjt:  IPKPAALKQIVKRCSSLGRKQDAPYDD--------VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

AT2G16580.1 SAUR-like auxin-responsive protein family7.5e-3062Show/hide
Query:  IPKPAALKQIVKRCSSLGRKQ--------DAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A L+QI+KRCSSLG+K         D P  DVPKGHF VYVG NRSRY+VPIS LT+ DFQCLLR AEEEFGF H MGLTIPC+E+ F+ LT+ ++
Subjt:  IPKPAALKQIVKRCSSLGRKQ--------DAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

AT2G21220.1 SAUR-like auxin-responsive protein family1.5e-3066.32Show/hide
Query:  IPKPAALKQIVKRCSSLGRKQDAPYD----DVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
        + + A LKQI+KRCSSL + Q    D    DVPKGHF VYVG+ RSRY+VPIS LTHP F+ LL+ AEEEFGF+H MGLTIPCEEVVFRSLT+ +
Subjt:  IPKPAALKQIVKRCSSLGRKQDAPYD----DVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL

AT4G34760.1 SAUR-like auxin-responsive protein family1.6e-3264.29Show/hide
Query:  IPKPAALKQIVKRCSSLGRKQDAPYD------DVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A LKQI+KRCSSLG+K    YD      DVPKGHF VYVG+NRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Subjt:  IPKPAALKQIVKRCSSLGRKQDAPYD------DVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

AT4G36110.1 SAUR-like auxin-responsive protein family2.3e-3167.02Show/hide
Query:  IPKPAALKQIVKRCSSLGRKQ--DAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A+LKQI+KRCSSLG+K   +  ++DVPKGHF VYVGQ+RSRYVVPIS L H +FQ LL+LAEEEFGF H MGLTIPC+EVVFRSL +  +
Subjt:  IPKPAALKQIVKRCSSLGRKQ--DAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATTCCCAAACCCGCCGCTCTCAAGCAAATTGTCAAGCGCTGCTCAAGCCTAGGCCGGAAGCAAGACGCCCCCTACGATGACGTTCCCAAGGGACATTTCGCCGT
CTATGTCGGCCAAAATCGGAGCCGATATGTCGTCCCGATCTCCCTCTTGACTCACCCCGATTTTCAGTGCCTCCTCCGCCTCGCCGAGGAGGAATTTGGCTTCCACCACC
ATATGGGCCTTACTATTCCTTGTGAAGAGGTGGTTTTCCGGTCACTCACCGCCGCCCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGATTCCCAAACCCGCCGCTCTCAAGCAAATTGTCAAGCGCTGCTCAAGCCTAGGCCGGAAGCAAGACGCCCCCTACGATGACGTTCCCAAGGGACATTTCGCCGT
CTATGTCGGCCAAAATCGGAGCCGATATGTCGTCCCGATCTCCCTCTTGACTCACCCCGATTTTCAGTGCCTCCTCCGCCTCGCCGAGGAGGAATTTGGCTTCCACCACC
ATATGGGCCTTACTATTCCTTGTGAAGAGGTGGTTTTCCGGTCACTCACCGCCGCCCTCAAATGA
Protein sequenceShow/hide protein sequence
MTIPKPAALKQIVKRCSSLGRKQDAPYDDVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK