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Lsi11G011560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr11:20134322..20134576
RNA-Seq ExpressionLsi11G011560
SyntenyLsi11G011560
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448012.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.5e-3995.24Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
        MGFRLINSPRK+SSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVF +VTSRLANC
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC

XP_011658572.1 auxin-responsive protein SAUR21 [Cucumis sativus]1.0e-4097.62Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
        MGFRLINSPRK+SSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC

XP_022135747.1 auxin-responsive protein SAUR21-like [Momordica charantia]6.7e-4097.59Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN
        MGFRLINSPRK+SSTVPKGFFAVYVGETQKRRHVIPIS+LKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN

XP_022952260.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]5.1e-4097.65Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC
        MGFRLINSPRK+SSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL ANC
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC

XP_038706687.1 auxin-induced protein 15A-like [Tripterygium wilfordii]7.2e-2668.13Show/hide
Query:  MGFRLINSPRK--------TSSTVPKGFFAVYVG-ETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLA
        MGFRL     K        TS  VPKGF A+YVG ETQK+R V+P+SYLKHPSFQDLLSK+EEEFG+DHPMGGLTIPC ED+F +VTSRL+
Subjt:  MGFRLINSPRK--------TSSTVPKGFFAVYVG-ETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLA

TrEMBL top hitse value%identityAlignment
A0A0A0K4I7 Uncharacterized protein5.0e-4197.62Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
        MGFRLINSPRK+SSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC

A0A5D3CP52 Auxin-responsive protein SAUR21-like7.2e-4095.24Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
        MGFRLINSPRK+SSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVF +VTSRLANC
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC

A0A6J1C3M2 auxin-responsive protein SAUR21-like3.2e-4097.59Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN
        MGFRLINSPRK+SSTVPKGFFAVYVGETQKRRHVIPIS+LKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN

A0A6J1GL96 auxin-responsive protein SAUR21-like2.5e-4097.65Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC
        MGFRLINSPRK+SSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL ANC
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC

A0A6J1HY12 auxin-responsive protein SAUR21-like2.5e-4097.65Show/hide
Query:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC
        MGFRLINSPRK+SSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL ANC
Subjt:  MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.2e-2565.38Show/hide
Query:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++      S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJF7 Auxin-responsive protein SAUR221.3e-2564.1Show/hide
Query:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++      S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMGGLTIPC+ED F  VTSRL
Subjt:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJF9 Auxin-responsive protein SAUR211.1e-2673.61Show/hide
Query:  RKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        R T+S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJG0 Auxin-responsive protein SAUR209.7e-2666.23Show/hide
Query:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR
        ++++     +S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSR
Subjt:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR

Q9FK62 Auxin-responsive protein SAUR247.4e-2665.38Show/hide
Query:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++      S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Arabidopsis top hitse value%identityAlignment
AT5G18020.1 SAUR-like auxin-responsive protein family6.9e-2766.23Show/hide
Query:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR
        ++++     +S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSR
Subjt:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR

AT5G18030.1 SAUR-like auxin-responsive protein family8.1e-2873.61Show/hide
Query:  RKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        R T+S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18050.1 SAUR-like auxin-responsive protein family9.0e-2764.1Show/hide
Query:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++      S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMGGLTIPC+ED F  VTSRL
Subjt:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18060.1 SAUR-like auxin-responsive protein family1.5e-2665.38Show/hide
Query:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++      S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family5.3e-2765.38Show/hide
Query:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++      S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCCGTTTGATAAACAGCCCAAGGAAAACATCATCGACTGTTCCAAAGGGGTTTTTCGCTGTCTACGTTGGAGAAACCCAAAAGAGACGACATGTGATTCCGAT
TTCTTACTTGAAGCATCCATCGTTTCAAGATTTGTTGAGTAAAGCTGAAGAAGAGTTTGGATTCGATCATCCAATGGGGGGCTTGACGATCCCTTGCAATGAAGATGTGT
TCTTCGAAGTCACTTCTCGCTTGGCTAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCCGTTTGATAAACAGCCCAAGGAAAACATCATCGACTGTTCCAAAGGGGTTTTTCGCTGTCTACGTTGGAGAAACCCAAAAGAGACGACATGTGATTCCGAT
TTCTTACTTGAAGCATCCATCGTTTCAAGATTTGTTGAGTAAAGCTGAAGAAGAGTTTGGATTCGATCATCCAATGGGGGGCTTGACGATCCCTTGCAATGAAGATGTGT
TCTTCGAAGTCACTTCTCGCTTGGCTAATTGTTGA
Protein sequenceShow/hide protein sequence
MGFRLINSPRKTSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC