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Lsi11G011600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationchr11:20150496..20150992
RNA-Seq ExpressionLsi11G011600
SyntenyLsi11G011600
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AMQ09574.1 small auxin up regulated protein [Boehmeria nivea]1.1e-0675.68Show/hide
Query:  QKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        QKKRY VP+SY+NEP+FQ+LLS A+EEF YD+PMGGL
Subjt:  QKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

AMQ09576.1 small auxin up regulated protein [Boehmeria nivea]1.4e-0667.44Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V I   QKKRY VP+SY+NEP+FQ+LLS A+EEF Y++PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

KAF8069829.1 hypothetical protein N665_1131s0027 [Sinapis alba]1.1e-0675.68Show/hide
Query:  QKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        QKKRY VPISY+N+PSFQ LLS ++EEFE+D+PMGGL
Subjt:  QKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

XP_030509906.1 auxin-responsive protein SAUR21 [Cannabis sativa]8.3e-0765.12Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +  +QKKRY VP+SY+NEP+FQ+LL+ A+EEF YD+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

XP_038887252.1 indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]1.3e-0772.09Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +  +QKKRY VPISY+NEPSFQ+LLS A+EEF YD+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

TrEMBL top hitse value%identityAlignment
A0A067JXR9 Uncharacterized protein6.9e-0769.77Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V I  K+KKRY VPISY+NEPSFQ LLS A+EE+ +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

A0A172J232 Small auxin up regulated protein5.3e-0775.68Show/hide
Query:  QKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        QKKRY VP+SY+NEP+FQ+LLS A+EEF YD+PMGGL
Subjt:  QKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

A0A2N9IM99 Uncharacterized protein6.9e-0767.44Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +  +QKKR+ VPISY+NEPSFQ+LLS A+EEF +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

A0A7J6H171 Uncharacterized protein4.0e-0765.12Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +  +QKKRY VP+SY+NEP+FQ+LL+ A+EEF YD+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

W9RMX7 Uncharacterized protein6.9e-0775.68Show/hide
Query:  QKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        QKKRY VPISY+NEP+FQ+LLS A+EEF Y++PMGGL
Subjt:  QKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A53.5e-0868.57Show/hide
Query:  KRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        +R+ +P+SY+NEPSFQ+LLS A+EEF YD+PMGGL
Subjt:  KRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

Q41220 Auxin-responsive protein SAUR152.7e-0865.79Show/hide
Query:  KQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        ++KKRY VP+SY+N+P FQ+LLS ++EEF YD+PMGGL
Subjt:  KQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

Q9FJF6 Auxin-responsive protein SAUR231.6e-0862.79Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +   QKKRY VP+SY+N+PSFQ LLS ++EEF +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

Q9FJG0 Auxin-responsive protein SAUR209.2e-0965.12Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +   QKKRY VPISY+N+PSFQ LLS ++EEF +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

Q9FK62 Auxin-responsive protein SAUR241.2e-0862.79Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +   QKKRY VP+SY+N+PSFQ LLS ++EEF +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

Arabidopsis top hitse value%identityAlignment
AT2G21200.1 SAUR-like auxin-responsive protein family6.6e-1062.79Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +   QKKRY VP+S++N+PSFQ LLS A+EEF +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

AT4G38850.1 SAUR-like auxin-responsive protein family1.9e-0965.79Show/hide
Query:  KQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        ++KKRY VP+SY+N+P FQ+LLS ++EEF YD+PMGGL
Subjt:  KQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

AT5G18020.1 SAUR-like auxin-responsive protein family6.6e-1065.12Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +   QKKRY VPISY+N+PSFQ LLS ++EEF +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

AT5G18060.1 SAUR-like auxin-responsive protein family1.1e-0962.79Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +   QKKRY VP+SY+N+PSFQ LLS ++EEF +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL

AT5G18080.1 SAUR-like auxin-responsive protein family8.6e-1062.79Show/hide
Query:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL
        V +   QKKRY VP+SY+N+PSFQ LLS ++EEF +D+PMGGL
Subjt:  VMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATGTACAGTCGCAATCGCTACCAAGTCGCTGTTAATCAGTTTGAGAACACTCCCCATGTGATGATTCTAGCCAAGCAAAAGAAGAGATATGAAGTCCCAATATC
TTACATGAATGAGCCATCATTTCAAAAGTTGCTCAGCTGGGCCAAGGAAGAATTTGAATACGACAATCCCATGGGAGGCCTCGTAGAGAAAATGTATTTACCGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCATGTACAGTCGCAATCGCTACCAAGTCGCTGTTAATCAGTTTGAGAACACTCCCCATGTGATGATTCTAGCCAAGCAAAAGAAGAGATATGAAGTCCCAATATC
TTACATGAATGAGCCATCATTTCAAAAGTTGCTCAGCTGGGCCAAGGAAGAATTTGAATACGACAATCCCATGGGAGGCCTCGTAGAGAAAATGTATTTACCGAACTAG
Protein sequenceShow/hide protein sequence
MFMYSRNRYQVAVNQFENTPHVMILAKQKKRYEVPISYMNEPSFQKLLSWAKEEFEYDNPMGGLVEKMYLPN