; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G011640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-induced protein 15A-like
Genome locationchr11:20164832..20165134
RNA-Seq ExpressionLsi11G011640
SyntenyLsi11G011640
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645658.1 hypothetical protein Csa_020170 [Cucumis sativus]5.7e-4693Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIVTAK SLQRSSSTGNGASPK VDVPKGYFTVYVGEE KKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC E+EFLDLT+SLN+S
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

XP_011658575.1 auxin-induced protein 15A [Cucumis sativus]4.3e-4694Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIVTAK SLQRSSSTGNGASPKAVDVPKGYF VY+GEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC E  FLDLTRSLNDS
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

XP_022952255.1 auxin-induced protein X10A-like [Cucurbita moschata]7.4e-4693Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIV+ K SLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC E++FLDLTRSLNDS
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

XP_038887254.1 auxin-induced protein 15A-like [Benincasa hispida]3.3e-4695Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIVTAK SLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC EE FL+LT+SLNDS
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

XP_038887900.1 auxin-induced protein X10A-like [Benincasa hispida]1.6e-4898Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIVTAK SLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCRE+EFLDLTRSLNDS
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

TrEMBL top hitse value%identityAlignment
A0A0A0K4J0 Uncharacterized protein2.1e-4694Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIVTAK SLQRSSSTGNGASPKAVDVPKGYF VY+GEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC E  FLDLTRSLNDS
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

A0A0A0K5T8 Uncharacterized protein2.7e-4693Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIVTAK SLQRSSSTGNGASPK VDVPKGYFTVYVGEE KKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC E+EFLDLT+SLN+S
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

A0A6J1GJW5 auxin-induced protein 15A-like6.1e-4693Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIV+ K SLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC E+ FLDLTRSLNDS
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

A0A6J1GL91 auxin-induced protein X10A-like3.6e-4693Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIV+ K SLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC E++FLDLTRSLNDS
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

A0A6J1HWI6 auxin-induced protein X10A-like2.3e-4592Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS
        MGFRLPRIV+ K SLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC E +FLDLTR+LNDS
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG78.8e-2660.2Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLN
        MGFRL       P ++++ S  N AS K +D PKGY  VYVGE   KRFVIP+S+LNQP FQDLLSQAEEEFGY+HPMGG+TIPC E+ F  +T  L+
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLN

P33079 Auxin-induced protein 10A51.2e-2761.62Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLND
        MGFR+  IV      +R+S     A+ K VDVPKGY  VYVG++  +RF IP+SYLN+PSFQ+LLSQAEEEFGY+HPMGG+TIPC+EEEFL++T  LN+
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLND

P33080 Auxin-induced protein X10A1.3e-2962.63Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLND
        MGFRL       P ++++S   N AS K+V+VPKGY  VYVG++  +RF+IP+SYLNQPSFQDLL+QAEEEFGY+HPMGG+TIPC+E+EFL +T  LND
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLND

P33081 Auxin-induced protein 15A2.6e-2562.24Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLN
        MGFRLP I  A                KA D PKGY  VYVG E+ KRFVIP+SYLNQPSFQDLLSQAEEEFGY+HPMGG+TIPC E+ F  +T  LN
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLN

P33083 Auxin-induced protein 6B8.0e-2762.24Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLN
        MGFRL       P ++++S + N AS KAVDV KGY  VYVGE+  +RFVIP+SYLN+PSFQDLLSQAEEEFGY+HP GG+TIPC E+ F  +T  LN
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLN

Arabidopsis top hitse value%identityAlignment
AT4G34800.1 SAUR-like auxin-responsive protein family7.7e-2556.12Show/hide
Query:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGE--EQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRS
        M  RL R++ +K S ++ S            VPKG+  VYVGE  E KKRFV+P+SYLN PSFQ LLS+AEEEFG+NHP+GG+TIPCREE F+ L  S
Subjt:  MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGE--EQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRS

AT4G38840.1 SAUR-like auxin-responsive protein family1.1e-2855.56Show/hide
Query:  MGFRLPRIV-TAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLN
        M  R+PR++ ++K  L+++    + +S  ++DVPKGY  VYVGE+  KRFV+P+SYL+QPSFQDLL +AEEEFG++HPMGG+TIPC EE F+DL    N
Subjt:  MGFRLPRIV-TAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLN

AT5G18010.1 SAUR-like auxin-responsive protein family6.5e-2455.56Show/hide
Query:  IVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSL
        ++ AK  L RS++ G+ A       PKG+  VYVGE QKKR+++PLSYL+QPSFQ LLS++EEEFG+ HPMGG+TIPC E+ F+++T  L
Subjt:  IVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSL

AT5G18020.1 SAUR-like auxin-responsive protein family1.1e-2355.17Show/hide
Query:  IVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLT
        ++ AK  L RS++  + A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG++HPMGG+TIPC E+ F+++T
Subjt:  IVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLT

AT5G18080.1 SAUR-like auxin-responsive protein family2.2e-2455.56Show/hide
Query:  IVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSL
        ++ AK  L RS+  G+ A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG++HPMGG+TIPC E+ F+++T  L
Subjt:  IVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCGTTTGCCTAGAATTGTTACTGCTAAGCCAAGCCTTCAACGATCTTCATCAACAGGGAACGGAGCATCTCCAAAGGCTGTTGATGTTCCAAAGGGATACTT
TACAGTTTATGTTGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCATTATCTTACTTGAACCAACCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGAT
ATAATCATCCAATGGGTGGCATCACAATTCCTTGCCGTGAAGAAGAGTTCCTCGATCTCACTCGAAGTTTGAACGACTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCCGTTTGCCTAGAATTGTTACTGCTAAGCCAAGCCTTCAACGATCTTCATCAACAGGGAACGGAGCATCTCCAAAGGCTGTTGATGTTCCAAAGGGATACTT
TACAGTTTATGTTGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCATTATCTTACTTGAACCAACCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGAT
ATAATCATCCAATGGGTGGCATCACAATTCCTTGCCGTGAAGAAGAGTTCCTCGATCTCACTCGAAGTTTGAACGACTCGTGA
Protein sequenceShow/hide protein sequence
MGFRLPRIVTAKPSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCREEEFLDLTRSLNDS