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Lsi11G011650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationchr11:20167073..20167369
RNA-Seq ExpressionLsi11G011650
SyntenyLsi11G011650
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572084.1 hypothetical protein SDJN03_28812, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4388.78Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        MGFRLPRIV AKQS RRSSS G+G+STVDVPKGYFTVYVGEVQKKRFVIPLSYLNQP+FQDLLSQAE+EFGYDHPMGGITIPCSE+ F+D TRSLKDS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

KAG6572087.1 hypothetical protein SDJN03_28815, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4489.8Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        MGFRLPRIV AKQS RRSSS GNG+STVDVPKGYFT+YVGEVQKKRFVIPLSYLNQP+FQDLLSQAE+EFGYDHPMGGITIPCSE+ F+DLTRSLKDS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

XP_022952259.1 auxin-induced protein 15A-like [Cucurbita moschata]1.0e-4491.84Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        MGFRLPRIV AKQS RRSSS GNG+STVDVPKGYFTVYVGEVQKKRFVIPLSYLNQP+FQDLLSQAEEEFGYDHPMGGITIPCSE+ F+DLTRSLKDS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

XP_022969520.1 auxin-induced protein 15A-like isoform X2 [Cucurbita maxima]1.2e-4389.8Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        MG RLPRIV AKQS R+SSS GNG+STVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAE+EFGYDHPMGGITIPCSE+ F+DLTRSLKDS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

XP_023554217.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]6.8e-4488.78Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        MGFRLPRIV AKQS RRSSS GNG+STVD+PKGYFTVYVGEVQKKRFVIPLSYLNQP+FQDLLSQ+E+EFGYDHPMGGITIPCSE+ F+DLTRSLKDS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

TrEMBL top hitse value%identityAlignment
A0A6J1GK20 auxin-induced protein X15-like2.8e-4389.9Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSE-EFFIDLTRSLKDS
        MGFRLPRIV AKQS RRSSS GNG+STVD+PKGYFTVYVGEVQKKRFVIPLSYLNQP+FQDLLSQAEEEFGYDHPMGGITIPCSE EF +DLTRSL DS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSE-EFFIDLTRSLKDS

A0A6J1GL62 auxin-induced protein 15A-like5.1e-4591.84Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        MGFRLPRIV AKQS RRSSS GNG+STVDVPKGYFTVYVGEVQKKRFVIPLSYLNQP+FQDLLSQAEEEFGYDHPMGGITIPCSE+ F+DLTRSLKDS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

A0A6J1I054 auxin-induced protein 15A-like isoform X25.6e-4489.8Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        MG RLPRIV AKQS R+SSS GNG+STVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAE+EFGYDHPMGGITIPCSE+ F+DLTRSLKDS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

A0A6J1I180 auxin-induced protein X10A-like5.8e-4185Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGAST--VDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        MGFRLPRIV AK+SL+RSSS+GNGAS+  VDVPKGYFTVYVGE QKKRFVIPLSYLNQP+FQDLLSQAEEEFGY+HPMGGIT+PCSE+ F+DLTRSL DS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGAST--VDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

A0A6J1I2U7 auxin-induced protein 15A-like isoform X15.3e-4287.88Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEE-FFIDLTRSLKDS
        MG RLPRIV AKQS R+SSS GNG+STVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAE+EFGYDHPMGGITIPCSE+ F +DLTRSL DS
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEE-FFIDLTRSLKDS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.1e-2563.16Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSL
        MGFRLP I   +++L  S+ N   +  +D PKGY  VYVGE   KRFVIP+S+LNQP FQDLLSQAEEEFGYDHPMGG+TIPCSE+ F  +T  L
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSL

P33080 Auxin-induced protein X10A3.0e-2658.76Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKD
        MGFRLP I +   +  ++SS      +V+VPKGY  VYVG+ + +RF+IP+SYLNQP+FQDLL+QAEEEFGYDHPMGG+TIPC E+ F+ +T  L D
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKD

P33081 Auxin-induced protein 15A3.3e-2562.11Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSL
        MGFRLP I +A ++              D PKGY  VYVGE + KRFVIP+SYLNQP+FQDLLSQAEEEFGYDHPMGG+TIPCSE+ F  +T  L
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSL

P33082 Auxin-induced protein X151.9e-2565.22Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLT
        MGFRLP I        R +SN      VD PKGY  VYVGE + KRFVIP+SY+NQP+FQDLL+QAEEEFGYDHPMGG+TIPCSEE F  +T
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLT

P33083 Auxin-induced protein 6B7.3e-2562.11Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSL
        MGFRLP I +A  S  ++SS       VDV KGY  VYVGE + +RFVIP+SYLN+P+FQDLLSQAEEEFGY HP GG+TIPCSE+ F  +T  L
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.5e-2552.53Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGE-VQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS
        M  R+ R++Q+ + L +S S  + ++ V +PKG+  VYVGE +QK+RFV+P++YL+ P FQ LL +AEEEFG+DHPMGG+TIPC+E+ FIDL   L  S
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGE-VQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS

AT4G34770.1 SAUR-like auxin-responsive protein family2.2e-2454.81Show/hide
Query:  MGFRLPRIVQAKQSLRRSSSNGNG-----ASTVDVPKGYFTVYVGEV-QKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRS
        MG +L  + QAKQ L+RS S         + T +VPKG+  VYVGE   +KRFVIP+SYLN P FQ LL+ AEEEFG+DHPMGG+TIPC+E++F  L   
Subjt:  MGFRLPRIVQAKQSLRRSSSNGNG-----ASTVDVPKGYFTVYVGEV-QKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRS

Query:  LKDS
        L  S
Subjt:  LKDS

AT4G38840.1 SAUR-like auxin-responsive protein family2.7e-3063.83Show/hide
Query:  MGFRLPRIVQ-AKQSLRRSS--SNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDL
        M  R+PR++Q +KQ LR++   S+ + +S++DVPKGY  VYVGE   KRFV+P+SYL+QP+FQDLL +AEEEFG+DHPMGG+TIPCSEE FIDL
Subjt:  MGFRLPRIVQ-AKQSLRRSS--SNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDL

AT5G18050.1 SAUR-like auxin-responsive protein family2.9e-2456.18Show/hide
Query:  IVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLK
        ++ AK+ L RS+     A+    PKG+  VYVGE QKKR+++PLSYLNQP+FQ LLS++E+EFG+DHPMGG+TIPC E+ FI++T  L+
Subjt:  IVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLK

AT5G18080.1 SAUR-like auxin-responsive protein family4.4e-2557.3Show/hide
Query:  IVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLK
        ++ AK+ L RS+  G+ A     PKG+  VYVGE QKKR+++P+SYLNQP+FQ LLS++EEEFG+DHPMGG+TIPC E+ FI++T  L+
Subjt:  IVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTCGTTTGCCTAGAATTGTTCAAGCTAAGCAAAGTCTTCGCCGGTCCTCATCAAATGGAAATGGAGCATCAACAGTTGACGTTCCAAAGGGGTACTTCACAGT
TTATGTTGGTGAGGTACAAAAGAAGCGTTTCGTCATTCCACTATCTTACTTGAACCAACCTACTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATC
ATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAATTTTTCATCGATCTCACTCGAAGTTTGAAAGACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTCGTTTGCCTAGAATTGTTCAAGCTAAGCAAAGTCTTCGCCGGTCCTCATCAAATGGAAATGGAGCATCAACAGTTGACGTTCCAAAGGGGTACTTCACAGT
TTATGTTGGTGAGGTACAAAAGAAGCGTTTCGTCATTCCACTATCTTACTTGAACCAACCTACTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATC
ATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAATTTTTCATCGATCTCACTCGAAGTTTGAAAGACTCATGA
Protein sequenceShow/hide protein sequence
MGFRLPRIVQAKQSLRRSSSNGNGASTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEFFIDLTRSLKDS