; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G011690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationchr11:20195046..20195291
RNA-Seq ExpressionLsi11G011690
SyntenyLsi11G011690
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]2.0e-3380.25Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        M +R LLKRN+GVS +PKGYCAVYVG+SQKKRF+IPI YLN+PCFQELLCQTEEEFGY+HPMGGLTIHCRDDIF + IS +
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.1e-3692.5Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISR
        MGIRQLLKRNQGVS IPKGYCAVYVGE+QKKRFVIPIT+LNQ CFQELL QTEE+FGYHHPMGGLTIHCRDDIFTDLISR
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISR

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]6.9e-3485.19Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        M +  LLKR+QGVS+IPKGYCAVYVGESQKKRF+IPI+YLNQPCFQELL QTEEEFGYHHPMGGLTIHC+D IFT+LISRL
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

XP_016900447.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]1.1e-2875.9Show/hide
Query:  MGIRQLLKR--NQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        M I QLL+R   +GV+ +PKGYCAVYVGE QKKRFVIP+TYLNQPCFQ LL Q EEEFGY+HPMGGLTI CR+DIFT+LIS+L
Subjt:  MGIRQLLKR--NQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]2.7e-3892.59Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        MG+RQLLKRNQGVS +PKGYCAVYVGESQKKRFVIPI+YLNQPCFQELLCQ EEEFGY+HPMGGLTIHCRDDIFTDLISRL
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein4.6e-3686.42Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        M ++ LLKRNQGVS +PKGYCAVYVGESQKKRFVIPITYLN+PCFQ+LLCQTEEEFGY+HPMGGLTIHCRDDIFTDLIS +
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

A0A0A0K5U4 Uncharacterized protein3.3e-3485.19Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        M +  LLKR+QGVS+IPKGYCAVYVGESQKKRF+IPI+YLNQPCFQELL QTEEEFGYHHPMGGLTIHC+D IFT+LISRL
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

A0A0A0K5V1 Uncharacterized protein5.0e-3075.58Show/hide
Query:  MGIRQLLKR-----NQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        MG+R+LL+R     NQ VS +PKGYCAVYVGE+QKKRFVIPITYLNQPCFQ+LL QT EEF Y+HPMGGLT HC DDIF DLIS L
Subjt:  MGIRQLLKR-----NQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

A0A5A7U363 Auxin-induced protein 15A-like9.7e-3480.25Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        M +R LLKRN+GVS +PKGYCAVYVG+SQKKRF+IPI YLN+PCFQELLCQTEEEFGY+HPMGGLTIHCRDDIF + IS +
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

A0A6J1C4W2 auxin-responsive protein SAUR24-like1.3e-3892.59Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        MG+RQLLKRNQGVS +PKGYCAVYVGESQKKRFVIPI+YLNQPCFQELLCQ EEEFGY+HPMGGLTIHCRDDIFTDLISRL
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR236.3e-2259.49Show/hide
Query:  RQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        +++L R+   VS  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  RQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

Q9FJF7 Auxin-responsive protein SAUR227.4e-2357.32Show/hide
Query:  MGIRQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+   VS  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGIRQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

Q9FJF9 Auxin-responsive protein SAUR216.3e-2256.79Show/hide
Query:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+   S  PKG+ AVYVGESQKKR+++P++YL+QP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

Q9FJG0 Auxin-responsive protein SAUR202.8e-2258.02Show/hide
Query:  MGIRQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISR
        +G +++L R+    S  PKG+ AVYVGESQKKR+++PI+YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SR
Subjt:  MGIRQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISR

Q9FK62 Auxin-responsive protein SAUR242.5e-2358.54Show/hide
Query:  MGIRQLLKRNQGV-SNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+ G  S  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGIRQLLKRNQGV-SNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.5e-2363.41Show/hide
Query:  RQLLKRNQGVSN---IPKGYCAVYVGE-SQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        +QLLK     SN   IPKG+ AVYVGE  QK+RFV+P+TYL+ PCFQ+LL + EEEFG+ HPMGGLTI C + IF DL SRL
Subjt:  RQLLKRNQGVSN---IPKGYCAVYVGE-SQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

AT5G18020.1 SAUR-like auxin-responsive protein family2.0e-2358.02Show/hide
Query:  MGIRQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISR
        +G +++L R+    S  PKG+ AVYVGESQKKR+++PI+YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SR
Subjt:  MGIRQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISR

AT5G18050.1 SAUR-like auxin-responsive protein family5.3e-2457.32Show/hide
Query:  MGIRQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+   VS  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGIRQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

AT5G18060.1 SAUR-like auxin-responsive protein family4.5e-2359.49Show/hide
Query:  RQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        +++L R+   VS  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  RQLLKRN-QGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL

AT5G18080.1 SAUR-like auxin-responsive protein family1.8e-2458.54Show/hide
Query:  MGIRQLLKRNQGV-SNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+ G  S  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGIRQLLKRNQGV-SNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGCCAACTTCTCAAAAGAAACCAAGGAGTTTCAAACATCCCCAAGGGCTATTGTGCAGTCTATGTTGGAGAGAGCCAAAAGAAACGGTTCGTGATCCCGAT
TACTTACTTGAATCAGCCATGCTTTCAAGAGTTGCTTTGTCAAACCGAAGAAGAATTCGGTTACCATCATCCTATGGGTGGTCTTACTATTCATTGCAGAGACGACATCT
TCACCGATCTCATCTCTCGTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGCCAACTTCTCAAAAGAAACCAAGGAGTTTCAAACATCCCCAAGGGCTATTGTGCAGTCTATGTTGGAGAGAGCCAAAAGAAACGGTTCGTGATCCCGAT
TACTTACTTGAATCAGCCATGCTTTCAAGAGTTGCTTTGTCAAACCGAAGAAGAATTCGGTTACCATCATCCTATGGGTGGTCTTACTATTCATTGCAGAGACGACATCT
TCACCGATCTCATCTCTCGTTTGTAG
Protein sequenceShow/hide protein sequence
MGIRQLLKRNQGVSNIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDLISRL