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Lsi11G011700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationchr11:20198224..20208560
RNA-Seq ExpressionLsi11G011700
SyntenyLsi11G011700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB61798.1 hypothetical protein L484_012229 [Morus notabilis]1.6e-0638.74Show/hide
Query:  SAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRD----HEPLFLAFSNIDCTIALGN----CRNSLVSFKKLAKPHIIQTRDEVSEDIIFAMNSKTSH
        + +PKGY AVYVGE QKKR        +++ +SY +     E L LA         +G     CR  +  F  L     IQ R+++ +DI  A NSK SH
Subjt:  SAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRD----HEPLFLAFSNIDCTIALGN----CRNSLVSFKKLAKPHIIQTRDEVSEDIIFAMNSKTSH

Query:  WMMVTEFFLSL
        WM+ +EFF SL
Subjt:  WMMVTEFFLSL
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]1.4e-0587.5Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR
        M LR LLKRN+GVSAVPKGYCAVYVG+SQKKR
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR
KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.3e-0687.5Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR
        MG+RQLLKRNQGVS +PKGYCAVYVGE+QKKR
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR
XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]1.2e-0457.41Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLF
        M L  LLKR+QGVS++PKGYCAVYVGESQKKR        ++I +SY  ++P F
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLF
XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]5.1e-0868.52Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLF
        MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR        ++I +SY  ++P F
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLF
TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein3.9e-0690.62Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR
        M L+ LLKRNQGVSAVPKGYCAVYVGESQKKR
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR
A0A0A0K5U4 Uncharacterized protein5.7e-0557.41Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLF
        M L  LLKR+QGVS++PKGYCAVYVGESQKKR        ++I +SY  ++P F
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLF
A0A5A7U363 Auxin-induced protein 15A-like6.7e-0687.5Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR
        M LR LLKRN+GVSAVPKGYCAVYVG+SQKKR
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR
A0A6J1C4W2 auxin-responsive protein SAUR24-like2.5e-0868.52Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLF
        MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKR        ++I +SY  ++P F
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLF
W9RMX7 Uncharacterized protein7.9e-0738.74Show/hide
Query:  SAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRD----HEPLFLAFSNIDCTIALGN----CRNSLVSFKKLAKPHIIQTRDEVSEDIIFAMNSKTSH
        + +PKGY AVYVGE QKKR        +++ +SY +     E L LA         +G     CR  +  F  L     IQ R+++ +DI  A NSK SH
Subjt:  SAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRD----HEPLFLAFSNIDCTIALGN----CRNSLVSFKKLAKPHIIQTRDEVSEDIIFAMNSKTSH

Query:  WMMVTEFFLSL
        WM+ +EFF SL
Subjt:  WMMVTEFFLSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18020.1 SAUR-like auxin-responsive protein family6.2e-0443.86Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLFLA
        +G +++L R+    SA PKG+ AVYVGESQKKR        +L+ +SY  ++P F A
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLFLA
AT5G18050.1 SAUR-like auxin-responsive protein family3.6e-0445.61Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLFLA
        +G +++L R+   VSA PKG+ AVYVGESQKKR        +L+ +SY  ++P F A
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLFLA
AT5G18080.1 SAUR-like auxin-responsive protein family9.6e-0547.37Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLFLA
        +G +++L R+ G  SA PKG+ AVYVGESQKKR        +L+ VSY  ++P F A
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLFLA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAATGCAAACCATATGAGGAAGATAGACATTGGCATTGATGGCCCAGATGATGAACACAAACAAGCAGAGGAGAGACGGAGACGTGGCTCGGTTAATCTTGACTC
AACAATGTCTGAAAAGAAGGATGACTCAAGTAAGAAACTGGTACAACAAAGCGCCTCCTCTGTGCTTCTCCAACATAAACAGCCAAGTGGCCTTTCGGAATCGCATCTGA
ACTGCGATGAATCCATTGGAGAATCTATTATATCGTACACTACAAACATGGGGCTTCGCCAGCTTCTTAAAAGAAACCAAGGAGTTTCTGCAGTTCCCAAGGGCTATTGT
GCAGTCTATGTTGGAGAAAGCCAAAAGAAACGTTTGGCAAAGCAACTCCTGAAAACATGGTTGATTCAAGTAAGTTATAGGGATCACGAACCGCTTTTTTTGGCTTTCTC
CAACATAGACTGCACAATAGCCCTTGGGAACTGCAGAAACTCCTTGGTTTCTTTTAAGAAGCTGGCGAAGCCCCATATCATTCAAACGAGAGATGAGGTCAGTGAAGATA
TCATCTTTGCAATGAATAGTAAGACCTCCCATTGGATGATGGTAACCGAATTCTTCCTCAGTTTGATTAAGCAACTCTTGAAAACATGGTTGATTCAAGTAAGTAATCGG
AATCACGAATCGCTTCTTTTGGCTCTCTCCGACATATACTGCACAATAGCCCTTGGGAATTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAATGCAAACCATATGAGGAAGATAGACATTGGCATTGATGGCCCAGATGATGAACACAAACAAGCAGAGGAGAGACGGAGACGTGGCTCGGTTAATCTTGACTC
AACAATGTCTGAAAAGAAGGATGACTCAAGTAAGAAACTGGTACAACAAAGCGCCTCCTCTGTGCTTCTCCAACATAAACAGCCAAGTGGCCTTTCGGAATCGCATCTGA
ACTGCGATGAATCCATTGGAGAATCTATTATATCGTACACTACAAACATGGGGCTTCGCCAGCTTCTTAAAAGAAACCAAGGAGTTTCTGCAGTTCCCAAGGGCTATTGT
GCAGTCTATGTTGGAGAAAGCCAAAAGAAACGTTTGGCAAAGCAACTCCTGAAAACATGGTTGATTCAAGTAAGTTATAGGGATCACGAACCGCTTTTTTTGGCTTTCTC
CAACATAGACTGCACAATAGCCCTTGGGAACTGCAGAAACTCCTTGGTTTCTTTTAAGAAGCTGGCGAAGCCCCATATCATTCAAACGAGAGATGAGGTCAGTGAAGATA
TCATCTTTGCAATGAATAGTAAGACCTCCCATTGGATGATGGTAACCGAATTCTTCCTCAGTTTGATTAAGCAACTCTTGAAAACATGGTTGATTCAAGTAAGTAATCGG
AATCACGAATCGCTTCTTTTGGCTCTCTCCGACATATACTGCACAATAGCCCTTGGGAATTGCTGA
Protein sequenceShow/hide protein sequence
MPNANHMRKIDIGIDGPDDEHKQAEERRRRGSVNLDSTMSEKKDDSSKKLVQQSASSVLLQHKQPSGLSESHLNCDESIGESIISYTTNMGLRQLLKRNQGVSAVPKGYC
AVYVGESQKKRLAKQLLKTWLIQVSYRDHEPLFLAFSNIDCTIALGNCRNSLVSFKKLAKPHIIQTRDEVSEDIIFAMNSKTSHWMMVTEFFLSLIKQLLKTWLIQVSNR
NHESLLLALSDIYCTIALGNC