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Lsi11G011720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G011720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationchr11:20209341..20212406
RNA-Seq ExpressionLsi11G011720
SyntenyLsi11G011720
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8546057.1 hypothetical protein F0562_020492 [Nyssa sinensis]9.7e-4448.47Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFF--------------
        MG   PRIV  K  ++++        VPKGH AVYVGETEKKR +VP+ YL+HPSF +L+ QAEEEF +DHPMGG T  C EE F               
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFF--------------

Query:  ---------------SHLARDRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNE
                       S +A       + V  GY  VYVGE++KKRFVIPV+YLNQP FQDLL++A EE+ + HPMGGLT  CR+DIF ++ S LN+
Subjt:  ---------------SHLARDRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNE

KAB5541521.1 hypothetical protein DKX38_014495 [Salix brachista]4.2e-4754.84Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR---------
        M I +P IV  K  LRRI     T+ V KGH AVYVGE +KKRF +PV YL HPS  +LLSQAEEEFG++HP GGL+  C+EE F   + R         
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR---------

Query:  ---------DRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ
                 + ++  S V KG  AVYVGE QKKRFV+P++YLNQP FQDLLSQA EEF Y+HPMGGLT  CR+DIF ++IS L++Q
Subjt:  ---------DRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ

TXG67343.1 hypothetical protein EZV62_008618 [Acer yangbiense]2.0e-4455.31Show/hide
Query:  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSA
        MG  LPRIV   K  L+         +VPKGH AVYVGETEKKR++VP+ YL HPSF +LLSQAEEEFG+DHP GGLT  C+EE F       +  R S+
Subjt:  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSA

Query:  ------------VIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN
                    V KG+ AVYVGE+Q+ RFVI V++LN   FQDLLSQA EEF + HPMGGLT  CR+DIF ++IS L+
Subjt:  ------------VIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN

TXG67345.1 hypothetical protein EZV62_008620 [Acer yangbiense]1.6e-4659.04Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSAV
        MG  LPRIV  K  L+R        IVPKGH AVYVGETEKKRF+VP+ YL HPSF +LL QAEEEFG+DHP GGLT  C+EE  F+  A   +   + V
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSAV

Query:  IKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN
          G+  VYVGE+Q+KRFVIPV++LN   FQDLL QA EEF + HPMGGLT  C++DIF ++IS L+
Subjt:  IKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN

XP_022135927.1 indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]9.1e-5063.79Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGET-EKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFF--SHLARDRNQRG
        MGI LPRIV  KHFLRRI Q SRTA VPKGHLAVYVGET +KKRFLVPV YLS+PSFHSLLSQ+EEEFGYDHPMGGLTFSCTEEIFF  S + R +    
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGET-EKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFF--SHLARDRNQRG

Query:  SAVIKGYCAVYVGENQKK--------RFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMIS
         + + G  A     +  K        R  IP++YLNQP FQDLLSQA EEF Y HPMGG+T  C +D F ++ S
Subjt:  SAVIKGYCAVYVGENQKK--------RFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMIS

TrEMBL top hitse value%identityAlignment
A0A5C7IDG9 Uncharacterized protein9.5e-4555.31Show/hide
Query:  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSA
        MG  LPRIV   K  L+         +VPKGH AVYVGETEKKR++VP+ YL HPSF +LLSQAEEEFG+DHP GGLT  C+EE F       +  R S+
Subjt:  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSA

Query:  ------------VIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN
                    V KG+ AVYVGE+Q+ RFVI V++LN   FQDLLSQA EEF + HPMGGLT  CR+DIF ++IS L+
Subjt:  ------------VIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN

A0A5C7IEC7 Uncharacterized protein7.8e-4759.04Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSAV
        MG  LPRIV  K  L+R        IVPKGH AVYVGETEKKRF+VP+ YL HPSF +LL QAEEEFG+DHP GGLT  C+EE  F+  A   +   + V
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDRNQRGSAV

Query:  IKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN
          G+  VYVGE+Q+KRFVIPV++LN   FQDLL QA EEF + HPMGGLT  C++DIF ++IS L+
Subjt:  IKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLN

A0A5N5LHL4 Uncharacterized protein2.0e-4754.84Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR---------
        M I +P IV  K  LRRI     T+ V KGH AVYVGE +KKRF +PV YL HPS  +LLSQAEEEFG++HP GGL+  C+EE F   + R         
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR---------

Query:  ---------DRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ
                 + ++  S V KG  AVYVGE QKKRFV+P++YLNQP FQDLLSQA EEF Y+HPMGGLT  CR+DIF ++IS L++Q
Subjt:  ---------DRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ

A0A6J1C452 indole-3-acetic acid-induced protein ARG7-like4.4e-5063.79Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGET-EKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFF--SHLARDRNQRG
        MGI LPRIV  KHFLRRI Q SRTA VPKGHLAVYVGET +KKRFLVPV YLS+PSFHSLLSQ+EEEFGYDHPMGGLTFSCTEEIFF  S + R +    
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGET-EKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFF--SHLARDRNQRG

Query:  SAVIKGYCAVYVGENQKK--------RFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMIS
         + + G  A     +  K        R  IP++YLNQP FQDLLSQA EEF Y HPMGG+T  C +D F ++ S
Subjt:  SAVIKGYCAVYVGENQKK--------RFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMIS

A0A6N2L447 Uncharacterized protein4.5e-4755.56Show/hide
Query:  FKMGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR-------
        F M I +P IVI K  LRRI     T+ V KGH AVYVGE +KKRF +P+ YL HPS  +LLSQA EEFG++HP GGL+  C+EE F   + R       
Subjt:  FKMGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR-------

Query:  ---DRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ
             ++  S V KG  AVYVGE  KKRFV+P++YLNQP FQDLLSQA EEF Y+HPMGGLT  CR+DIF ++IS  ++Q
Subjt:  ---DRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.3e-1963.29Show/hide
Query:  RNQRGSAVI---KGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ
        RN+  S V+   KGY AVYVGEN  KRFVIPV++LNQP FQDLLSQA EEF Y HPMGGLT  C +D+F ++ S L+ Q
Subjt:  RNQRGSAVI---KGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQ

P33081 Auxin-induced protein 15A3.5e-2067.65Show/hide
Query:  IRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIF
        IR+ S+ A  PKG+LAVYVGE + KRF++PV YL+ PSF  LLSQAEEEFGYDHPMGGLT  C+E++F
Subjt:  IRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIF

P33082 Auxin-induced protein X152.3e-1964.71Show/hide
Query:  IRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIF
        IR+ S     PKG+LAVYVGE + KRF++PV Y++ PSF  LL+QAEEEFGYDHPMGGLT  C+EE+F
Subjt:  IRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIF

Q9FJF9 Auxin-responsive protein SAUR217.8e-2057.89Show/hide
Query:  RRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR
        ++I   S  +  PKG LAVYVGE++KKR+LVP+ YLS PSF +LLS++EEEFG+DHPMGGLT  C E+ F +  +R
Subjt:  RRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR

Q9FJG0 Auxin-responsive protein SAUR201.7e-1957.53Show/hide
Query:  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR
        R  +  +  PKG LAVYVGE++KKR+LVP+ YL+ PSF +LLS++EEEFG+DHPMGGLT  C E+ F +  +R
Subjt:  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.3e-2254.84Show/hide
Query:  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGE-TEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR
        M I + R++   K  L+ +   S    +PKGHLAVYVGE  +K+RF+VPV YLSHP F  LL +AEEEFG+DHPMGGLT  CTE+IF    +R
Subjt:  MGIPLPRIV-IPKHFLRRIRQLSRTAIVPKGHLAVYVGE-TEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR

AT4G38840.1 SAUR-like auxin-responsive protein family3.8e-2254.64Show/hide
Query:  MGIPLPRIV-IPKHFLRRIRQLSRTAI-----VPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR
        M I +PR++   K  LR+ + LS ++      VPKG+LAVYVGE   KRF+VPV YL  PSF  LL +AEEEFG+DHPMGGLT  C+EEIF    +R
Subjt:  MGIPLPRIV-IPKHFLRRIRQLSRTAI-----VPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR

AT5G18020.1 SAUR-like auxin-responsive protein family1.2e-2057.53Show/hide
Query:  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR
        R  +  +  PKG LAVYVGE++KKR+LVP+ YL+ PSF +LLS++EEEFG+DHPMGGLT  C E+ F +  +R
Subjt:  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR

AT5G18030.1 SAUR-like auxin-responsive protein family5.5e-2157.89Show/hide
Query:  RRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR
        ++I   S  +  PKG LAVYVGE++KKR+LVP+ YLS PSF +LLS++EEEFG+DHPMGGLT  C E+ F +  +R
Subjt:  RRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR

AT5G18080.1 SAUR-like auxin-responsive protein family2.1e-2058.9Show/hide
Query:  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR
        R     +  PKG LAVYVGE++KKR+LVPV YL+ PSF +LLS++EEEFG+DHPMGGLT  C E+ F +  +R
Subjt:  RQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACACCAATTCCCATCACAGGAGCTACCATTTCCAATTCAAAATGGGCATCCCTTTGCCAAGAATTGTAATTCCAAAGCACTTTCTGAGGCGTATTCGTCAGTTG
TCACGAACTGCCATCGTGCCGAAAGGCCACTTGGCTGTGTATGTTGGAGAGACAGAAAAGAAGAGATTTTTGGTCCCTGTTGAATATTTGAGCCATCCTTCATTC
CATAGCTTGTTGAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCTATGGGTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGA
GACAGAAACCAGAGAGGTTCCGCTGTTATTAAGGGCTATTGTGCAGTCTATGTTGGAGAGAACCAAAAGAAGCGGTTCGTGATTCCAGTTACTTACTTGAATCAA
CCATGTTTTCAAGACTTGCTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTCACATTTCACTGCAGAGATGATATCTTTGCTAATATG
ATCTCTCACTTGAATGAACAACTATGA
mRNA sequenceShow/hide mRNA sequence
AACACCAATTCCCATCACAGGAGCTACCATTTCCAATTCAAAATGGGCATCCCTTTGCCAAGAATTGTAATTCCAAAGCACTTTCTGAGGCGTATTCGTCAGTTG
TCACGAACTGCCATCGTGCCGAAAGGCCACTTGGCTGTGTATGTTGGAGAGACAGAAAAGAAGAGATTTTTGGTCCCTGTTGAATATTTGAGCCATCCTTCATTC
CATAGCTTGTTGAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCTATGGGTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGA
GACAGAAACCAGAGAGGTTCCGCTGTTATTAAGGGCTATTGTGCAGTCTATGTTGGAGAGAACCAAAAGAAGCGGTTCGTGATTCCAGTTACTTACTTGAATCAA
CCATGTTTTCAAGACTTGCTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTCACATTTCACTGCAGAGATGATATCTTTGCTAATATG
ATCTCTCACTTGAATGAACAACTATGA
Protein sequenceShow/hide protein sequence
NTNSHHRSYHFQFKMGIPLPRIVIPKHFLRRIRQLSRTAIVPKGHLAVYVGETEKKRFLVPVEYLSHPSFHSLLSQAEEEFGYDHPMGGLTFSCTEEIFFSHLAR
DRNQRGSAVIKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLLSQATEEFEYYHPMGGLTFHCRDDIFANMISHLNEQL