; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G012100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G012100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:20625697..20635483
RNA-Seq ExpressionLsi11G012100
SyntenyLsi11G012100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011771.1 hypothetical protein SDJN02_26677, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-3356.58Show/hide
Query:  KQQGSLIEDPAQSSGGTLRLHHLRHQSDHCNQRLNQTFHFHDLLEQHSGLLQMALIGFHLFVLLFSLQMLLTSSAVESVPLEKSSHLGSFDSNLSKKFTR
        +QQGSLIEDPAQSSGGTLRLHHLRH+SDHCN+RLNQTF FH L                    +  +Q   T    E    +   H       LSKK TR
Subjt:  KQQGSLIEDPAQSSGGTLRLHHLRHQSDHCNQRLNQTFHFHDLLEQHSGLLQMALIGFHLFVLLFSLQMLLTSSAVESVPLEKSSHLGSFDSNLSKKFTR

Query:  TSSWVWTYGVPTWNDLRNRKHKFFSTILIILSPSTAAIHPFNTSEIEKRALD
        T SWVW   VPTWNDLRNRK KFFSTIL ILSPST A+HPFNTSE +++A +
Subjt:  TSSWVWTYGVPTWNDLRNRKHKFFSTILIILSPSTAAIHPFNTSEIEKRALD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGTATGCCAATCGAGTTGTTGGTTGCCTGGTTTGTCACTCAAATAGCTGAACTGAAGCCAAAGGACTTGACAATGGTGCTCACACTTTCTGCAAAAGTTTTGGA
AAAATCAAAGGTTGTGCATATTTCGAGCAAAAGAAGATCATTTGAGATACCAACAGATGCCAATTCTGGTTTCCGCTGGCCATCAATGAAGTTGACTACAACAGCAAGCG
AGATTCCTAGATCTGATCCGCGAAATATCAAATTACAAGCAAGAAAACAGAAAGGTCAGCAAGATAAACATACCTCGCTCATCGACGACATCCAGCGAACAGTGTACAAT
GTGGTGGAGCTTGAGAGCATCATCGGCCTCCGTGAAGCTTTGAATCTCGGCCCGAATCGGAAAAGGGATCACAAATCTTTTCTTATAAACATATATGAAATTATTTTCGG
TTCCATAAAATATGGTATTCATGGGGGTCGCACCTGGTGGCCGACGACGGCGACGCAGACGATCATCTTCGACGGTGGCCGGCCGGAATTCTTTTGCAGGATTGTGAAAA
AACTCGAATTTGTCGGTTGCGATACCACGAAGAAGCAACAAGGTTCTTTGATTGAGGACCCTGCCCAGTCCTCCGGCGGTACTTTGCGATTGCATCATCTTCGTCATCAA
TCCGATCACTGCAATCAGAGATTGAATCAGACCTTCCATTTTCATGATCTCTTAGAACAGCATTCTGGTCTTCTACAAATGGCTTTGATTGGATTCCATTTGTTTGTGTT
ACTGTTTTCCCTGCAAATGCTACTCACATCCAGTGCAGTTGAATCCGTGCCATTGGAGAAGAGTAGCCACTTGGGTTCATTTGATAGCAATCTGAGCAAGAAGTTCACAA
GAACTAGCTCTTGGGTGTGGACATATGGTGTCCCTACATGGAATGACTTGAGAAACAGGAAGCACAAGTTCTTCTCCACCATTTTGATTATTCTCAGTCCCAGCACAGCA
GCAATCCATCCATTCAATACATCTGAAATAGAAAAGAGAGCTTTAGACATCCAAATTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAGTATGCCAATCGAGTTGTTGGTTGCCTGGTTTGTCACTCAAATAGCTGAACTGAAGCCAAAGGACTTGACAATGGTGCTCACACTTTCTGCAAAAGTTTTGGA
AAAATCAAAGGTTGTGCATATTTCGAGCAAAAGAAGATCATTTGAGATACCAACAGATGCCAATTCTGGTTTCCGCTGGCCATCAATGAAGTTGACTACAACAGCAAGCG
AGATTCCTAGATCTGATCCGCGAAATATCAAATTACAAGCAAGAAAACAGAAAGGTCAGCAAGATAAACATACCTCGCTCATCGACGACATCCAGCGAACAGTGTACAAT
GTGGTGGAGCTTGAGAGCATCATCGGCCTCCGTGAAGCTTTGAATCTCGGCCCGAATCGGAAAAGGGATCACAAATCTTTTCTTATAAACATATATGAAATTATTTTCGG
TTCCATAAAATATGGTATTCATGGGGGTCGCACCTGGTGGCCGACGACGGCGACGCAGACGATCATCTTCGACGGTGGCCGGCCGGAATTCTTTTGCAGGATTGTGAAAA
AACTCGAATTTGTCGGTTGCGATACCACGAAGAAGCAACAAGGTTCTTTGATTGAGGACCCTGCCCAGTCCTCCGGCGGTACTTTGCGATTGCATCATCTTCGTCATCAA
TCCGATCACTGCAATCAGAGATTGAATCAGACCTTCCATTTTCATGATCTCTTAGAACAGCATTCTGGTCTTCTACAAATGGCTTTGATTGGATTCCATTTGTTTGTGTT
ACTGTTTTCCCTGCAAATGCTACTCACATCCAGTGCAGTTGAATCCGTGCCATTGGAGAAGAGTAGCCACTTGGGTTCATTTGATAGCAATCTGAGCAAGAAGTTCACAA
GAACTAGCTCTTGGGTGTGGACATATGGTGTCCCTACATGGAATGACTTGAGAAACAGGAAGCACAAGTTCTTCTCCACCATTTTGATTATTCTCAGTCCCAGCACAGCA
GCAATCCATCCATTCAATACATCTGAAATAGAAAAGAGAGCTTTAGACATCCAAATTAAGTAG
Protein sequenceShow/hide protein sequence
MTSMPIELLVAWFVTQIAELKPKDLTMVLTLSAKVLEKSKVVHISSKRRSFEIPTDANSGFRWPSMKLTTTASEIPRSDPRNIKLQARKQKGQQDKHTSLIDDIQRTVYN
VVELESIIGLREALNLGPNRKRDHKSFLINIYEIIFGSIKYGIHGGRTWWPTTATQTIIFDGGRPEFFCRIVKKLEFVGCDTTKKQQGSLIEDPAQSSGGTLRLHHLRHQ
SDHCNQRLNQTFHFHDLLEQHSGLLQMALIGFHLFVLLFSLQMLLTSSAVESVPLEKSSHLGSFDSNLSKKFTRTSSWVWTYGVPTWNDLRNRKHKFFSTILIILSPSTA
AIHPFNTSEIEKRALDIQIK