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Lsi11G012140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G012140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein translocase complex, SecE/Sec61-gamma subunit
Genome locationchr11:20683808..20687598
RNA-Seq ExpressionLsi11G012140
SyntenyLsi11G012140
Gene Ontology termsGO:0006605 - protein targeting (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0090351 - seedling development (biological process)
GO:0009528 - plastid inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR038379 - SecE superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144859.1 uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus]2.7e-6685.44Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVI S LG  HIG ICLPQSK+P+HVL YNT R NKS++FQRLHTRISKRSGHHLYAGRMGFNHAAL ++ QQ SFNDELPPEPFFL LIKET WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRT
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALS VDSALSY+LTL+LRRT
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRT
XP_008447932.1 PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo]3.4e-6182.39Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVI S LG +HIG ICLPQ K  +HVL YN  R NKS++FQRLHTRISKRSG HLYAGRMGFNHAA G++ QQ SFNDE P EPFFL LIKET WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALS VDSALSY+LTLLLRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
XP_022928229.1 uncharacterized protein LOC111435124 [Cucurbita moschata]2.6e-6183.65Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVIASALGANHIG   LP S  PFHV  YNTAR NK+NIFQ L TRIS+R G HLYA RMGFNHAA GRDNQQL FNDELPPEPFFLG+IKET+WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
         IFLAEQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALS VDS LSYILT +LRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
XP_023529805.1 uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo]1.8e-6284.91Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVIASALGANHIG   LP S  PFHV  YNTARFNK+NIFQ L TRIS+RSG HLYA RMGFNHAA GRDNQQL FNDELPPEPFFLG+IKET+WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
         IFLAEQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALS VDS LSYILT +LRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
XP_038888680.1 uncharacterized protein LOC120078486 [Benincasa hispida]5.6e-7290.57Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVIASALGAN IGT+C+PQSK+PFHVLHYNTARFNKS I QRLHTRISKR+GHH+YAGRMGFNHAA G+DNQQLSFNDE PPEPFFL LIKET+WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
        LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALS VDSALSYILTL LRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
TrEMBL top hitse value%identityAlignment
A0A0A0K1C8 Uncharacterized protein1.3e-6685.44Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVI S LG  HIG ICLPQSK+P+HVL YNT R NKS++FQRLHTRISKRSGHHLYAGRMGFNHAAL ++ QQ SFNDELPPEPFFL LIKET WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRT
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALS VDSALSY+LTL+LRRT
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRT
A0A1S3BJG9 uncharacterized protein LOC1034902691.7e-6182.39Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVI S LG +HIG ICLPQ K  +HVL YN  R NKS++FQRLHTRISKRSG HLYAGRMGFNHAA G++ QQ SFNDE P EPFFL LIKET WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALS VDSALSY+LTLLLRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
A0A5A7SIK1 Protein translocase complex, SecE/Sec61-gamma subunit1.7e-6182.39Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVI S LG +HIG ICLPQ K  +HVL YN  R NKS++FQRLHTRISKRSG HLYAGRMGFNHAA G++ QQ SFNDE P EPFFL LIKET WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALS VDSALSY+LTLLLRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
A0A6J1EK97 uncharacterized protein LOC1114351241.3e-6183.65Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVIASALGANHIG   LP S  PFHV  YNTAR NK+NIFQ L TRIS+R G HLYA RMGFNHAA GRDNQQL FNDELPPEPFFLG+IKET+WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
         IFLAEQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALS VDS LSYILT +LRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
A0A6J1JF36 uncharacterized protein LOC1114863311.8e-6082.39Show/hide
Query:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL
        MVIASALGANHIG   LP S  PF V HYNTARFNK+N+FQ L TRIS R G HLYA RMGFNHAA GRDN QL FNDELPPEPFFLG+IKET+WGLRSL
Subjt:  MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
         IFLAEQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALS VDS LS+ILT +LRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38490.1 unknown protein1.3e-2152.14Show/hide
Query:  KRSGHHLYAGRMGFNH-------AALGRDNQQLSFNDELP-PEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVAL
        K SG     GR+   H        ++G   +  S + +LP  EP +L L+++ +W  RSLL F+AEQPSQLKYIEWP+F STLKTATL+L LVA+ IVAL
Subjt:  KRSGHHLYAGRMGFNH-------AALGRDNQQLSFNDELP-PEPFFLGLIKETIWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVAL

Query:  SLVDSALSYILTLLLRR
        S VD+AL YIL L+LR+
Subjt:  SLVDSALSYILTLLLRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTACGATTTGTCTTCCTCAGTCCAAGGATCCATTCCACGTTCTACATTACAACACAGCAAGATTCAACAAGTC
CAATATCTTTCAGAGACTGCACACCAGGATTTCCAAAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGGCTTTAACCACGCTGCATTGGGACGAGATAATCAGCAAC
TGAGCTTTAATGATGAATTGCCTCCAGAACCTTTCTTCTTGGGTCTAATTAAAGAAACCATTTGGGGATTGAGATCGTTGTTAATATTTCTAGCCGAGCAGCCCAGTCAA
CTGAAGTACATTGAATGGCCTAGCTTCCAGAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATCGTAGCACTCTCATTGGTGGACTCGGCACT
TAGCTACATTTTGACTTTACTTCTCAGAAGAACCTCGTAA
mRNA sequenceShow/hide mRNA sequence
TGGAAATTAGGGGGCGCCCTATTTATTTATGAGGTCATAAAAGAAAGAAAAAAAAAAGAGGGAAAAAAAAAGACTTAAGACTCCATCTTCTCCCTCTCCTCAGCAGCTGC
CCACCCCACCCCCCGTTGCAGACATCTTCGCCGGCAACACAGACCACGAACGACGGCCGGCGAGTCTCCTACGACAACGGCGCTTACTTCTTCTTGGTGCCGACAAACTC
AGACCCCGTGAGCCCTTGTGTTGCCGGCAGTACCCACGAAACCCAACCAAGGTGACTGCGTTAGCTTCGTCGGCGTACTCTTATTTCGACGGCTTATTGGATGTTGACGC
TTGTTCAAGGTTTTGGATTTCGGATTGAGAACGATAGGTTTTTGATCCTGCTTTGTTGGAAAATACGGACTGTTACACTATTCAAACACTATTGAAGCTCAAGTATCTTT
AGATCTCAAGGATACAATTGTACAACCTATAGAACAGATCTTGTTCAAGTAAGTGGTGTTATTAAACTATTGCTCTAAGATGGTGATCGCTTCTGCACTTGGGGCTAATC
ATATTGGTACGATTTGTCTTCCTCAGTCCAAGGATCCATTCCACGTTCTACATTACAACACAGCAAGATTCAACAAGTCCAATATCTTTCAGAGACTGCACACCAGGATT
TCCAAAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGGCTTTAACCACGCTGCATTGGGACGAGATAATCAGCAACTGAGCTTTAATGATGAATTGCCTCCAGAACC
TTTCTTCTTGGGTCTAATTAAAGAAACCATTTGGGGATTGAGATCGTTGTTAATATTTCTAGCCGAGCAGCCCAGTCAACTGAAGTACATTGAATGGCCTAGCTTCCAGA
GCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATCGTAGCACTCTCATTGGTGGACTCGGCACTTAGCTACATTTTGACTTTACTTCTCAGAAGA
ACCTCGTAATAAATGCTGCTTCTCTTCTCCTATTGGTACATCAGTTTCTCAGAAATTTAACTTCGCTTTGCCACATTTCTAAAATGATAACTGAGAGTGAGAGTTCTTCG
TATGTTAATATAGTTGGACATGTTTTGAAATAGGTAATGCATAAGCATCTCTTTGAAATCATGCAATAAAGAAAGTAGAGAATGTTGTCTTCTA
Protein sequenceShow/hide protein sequence
MVIASALGANHIGTICLPQSKDPFHVLHYNTARFNKSNIFQRLHTRISKRSGHHLYAGRMGFNHAALGRDNQQLSFNDELPPEPFFLGLIKETIWGLRSLLIFLAEQPSQ
LKYIEWPSFQSTLKTATLALVLVALLIVALSLVDSALSYILTLLLRRTS