; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G012530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G012530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L6
Genome locationchr11:21166696..21170006
RNA-Seq ExpressionLsi11G012530
SyntenyLsi11G012530
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR002358 - Ribosomal protein L6, conserved site
IPR019906 - Ribosomal protein L6, bacterial-type
IPR020040 - Ribosomal protein L6, alpha-beta domain
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572299.1 50S ribosomal protein L6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.1e-11188.79Show/hide
Query:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG
        SST CL  +  ++    +NFRSTF GEKNGF++STMPV H G+LRKTI+CKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSILYPREVKIE+EDSG
Subjt:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG

Query:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI
        IL+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRM IPEGLQVKVEENTRITVSGYDKCAIGQFAASI
Subjt:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI

Query:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        RQWRPPEPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_004144493.1 50S ribosomal protein L6, chloroplastic [Cucumis sativus]1.8e-11187.71Show/hide
Query:  MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEK
        MALSS  + LQP   +  P  +NFRSTF GEKNGF VS MP CHIGLLRKTI+CKESRIGKQPIQVPS+VTITLQGQDLKVKGPLGELSILYPREVKIE+
Subjt:  MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEK

Query:  EDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQF
        EDSGI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA++EGKDLVLNLGFSHPVRM IP+G+Q+KVEENTRITVSGYDKCAIGQF
Subjt:  EDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQF

Query:  AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_008455431.1 PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo]2.8e-11288.56Show/hide
Query:  MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEK
        MALSS  + LQP   +  P  +NFRSTF GEKNGF VS MPVCHIGLLRKTI+CKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIE+
Subjt:  MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEK

Query:  EDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQF
        EDSGI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA++EGKDLVLNLGFSHPVRM IP+G+Q+KVEENTRITVSGYDKCAIGQF
Subjt:  EDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQF

Query:  AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_022952947.1 50S ribosomal protein L6, chloroplastic-like [Cucurbita moschata]3.1e-11189.22Show/hide
Query:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG
        SST CL  +  ++    +NFRSTF GEKNGF++STMPV H G+LRKTI+CKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSILYPREVKIE+EDSG
Subjt:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG

Query:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI
        IL+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRM IPEGLQVKVEENTRITVSGYDKCAIGQFAASI
Subjt:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI

Query:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_023554603.1 50S ribosomal protein L6, chloroplastic-like [Cucurbita pepo subsp. pepo]4.1e-11189.22Show/hide
Query:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG
        SST CL+ +  ++    +NFRSTF GEKNGF++STMPV H G LRKTI+CKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSILYPREVKIE+EDSG
Subjt:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG

Query:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI
        IL+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRM IPEGLQVKVEENTRITVSGYDKCAIGQFAASI
Subjt:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI

Query:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0K3K9 Uncharacterized protein8.9e-11287.71Show/hide
Query:  MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEK
        MALSS  + LQP   +  P  +NFRSTF GEKNGF VS MP CHIGLLRKTI+CKESRIGKQPIQVPS+VTITLQGQDLKVKGPLGELSILYPREVKIE+
Subjt:  MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEK

Query:  EDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQF
        EDSGI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA++EGKDLVLNLGFSHPVRM IP+G+Q+KVEENTRITVSGYDKCAIGQF
Subjt:  EDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQF

Query:  AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A1S3C0W5 50S ribosomal protein L6, chloroplastic1.4e-11288.56Show/hide
Query:  MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEK
        MALSS  + LQP   +  P  +NFRSTF GEKNGF VS MPVCHIGLLRKTI+CKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIE+
Subjt:  MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEK

Query:  EDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQF
        EDSGI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA++EGKDLVLNLGFSHPVRM IP+G+Q+KVEENTRITVSGYDKCAIGQF
Subjt:  EDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQF

Query:  AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  AASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1C3Z5 50S ribosomal protein L6, chloroplastic4.4e-11193.95Show/hide
Query:  SNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMH
        SNFRSTF GEKNGFSVSTMPVCHIGLLRKTI+CKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELSILYPREVKIE+EDSGIL+VKKA+ETRRA QMH
Subjt:  SNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMH

Query:  GLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRM IP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEIVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEIVRRKEGKAGKKK

A0A6J1GLT4 50S ribosomal protein L6, chloroplastic-like1.5e-11189.22Show/hide
Query:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG
        SST CL  +  ++    +NFRSTF GEKNGF++STMPV H G+LRKTI+CKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSILYPREVKIE+EDSG
Subjt:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG

Query:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI
        IL+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRM IPEGLQVKVEENTRITVSGYDKCAIGQFAASI
Subjt:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI

Query:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1HVU0 50S ribosomal protein L6, chloroplastic-like2.2e-11088.36Show/hide
Query:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG
        SST CL  +  ++    +NFRSTF GEKNGF++STMPV H G+LRKTI+CKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSI+YPREVKIE+EDSG
Subjt:  SSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSG

Query:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI
        IL+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPV M IPEGLQVKVEENTRITVSGYDKCAIGQFAASI
Subjt:  ILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASI

Query:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  RQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

SwissProt top hitse value%identityAlignment
B0C1E7 50S ribosomal protein L62.9e-5159.22Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEG
        SRIGK PI +P  V +T++GQ + VKGP GELS     EV IE+ D+ ++ V +  E+R A Q HGL RTL  NMV GVSKGFEKKLQ+ GVGYRA ++G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
        ++L+LN+G+S+PV +  PEG+QV VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B1WQS5 50S ribosomal protein L61.1e-5055.31Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEG
        SRIGK+PI +P+ VTI ++GQ + VKGP G L +  P EV + +E   + +V++  ++R A + HGLFRTL  NM+ GVS+GFEK+L + GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV MT+P+G+ V VE NT++ VSG DK  +G  AA IR  RPPEPYKGKG++Y DE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B7KI01 50S ribosomal protein L62.4e-5055.31Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEG
        SRIGK+PI +P+ VT+ + G  + VKGP GEL    P  V +E +D G+L+V +  ++R A Q HGL RTL  NMV GVSKGFEK+L++ GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV M +P G+ V VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  E+VRRK GK GKK
Subjt:  KDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

O23049 50S ribosomal protein L6, chloroplastic1.8e-9378.3Show/hide
Query:  RSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLF
        RS F G++N F VS+ P   +G   KTI+CKESRIGKQPI VPSNVTI L+GQDLKVKGPLGEL++ YPREV++ KE+SG L+VKK +ETRRANQMHGLF
Subjt:  RSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLF

Query:  RTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEI
        RTLTDNMVVGVSKGFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IP+ L+VKVEENTRITVSGYDK  IGQFAA++R+WRPPEPYKGKGVKY+DEI
Subjt:  RTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEI

Query:  VRRKEGKAGKKK
        VRRKEGKAGKKK
Subjt:  VRRKEGKAGKKK

P82193 50S ribosomal protein L6, chloroplastic7.5e-9275.11Show/hide
Query:  LSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETR
        +S P  S+ +S F G K   S S +PV  IG  RK++DCKESRIGKQPI VP+NV I ++GQDLKVKGPLGELSI YPREV +EK++SG L+V+KA+ETR
Subjt:  LSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETR

Query:  RANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKG
        RANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRA +EGKDL+L+LGFSHPVRM IP+ LQVKVEENT++TVSG DK  +GQFAA+IR WRPPEPYKG
Subjt:  RANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKG

Query:  KGVKYADEIVRRKEGKAGKKK
        KGV+Y DE+VRRKEGKAGKKK
Subjt:  KGVKYADEIVRRKEGKAGKKK

Arabidopsis top hitse value%identityAlignment
AT1G05190.1 Ribosomal protein L6 family1.3e-9478.3Show/hide
Query:  RSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLF
        RS F G++N F VS+ P   +G   KTI+CKESRIGKQPI VPSNVTI L+GQDLKVKGPLGEL++ YPREV++ KE+SG L+VKK +ETRRANQMHGLF
Subjt:  RSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKKALETRRANQMHGLF

Query:  RTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEI
        RTLTDNMVVGVSKGFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IP+ L+VKVEENTRITVSGYDK  IGQFAA++R+WRPPEPYKGKGVKY+DEI
Subjt:  RTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEI

Query:  VRRKEGKAGKKK
        VRRKEGKAGKKK
Subjt:  VRRKEGKAGKKK

AT2G18400.1 ribosomal protein L6 family protein1.0e-1945.92Show/hide
Query:  FEKKLQLVGVGYRAILE--GKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK
        F + L++VGVGY+A  E  G+ L L LG+SH V + +P  ++V   +N  +  +G DK  + QFAA++R  +PPEPYKGKG+ Y DE+V++K+GK  K
Subjt:  FEKKLQLVGVGYRAILE--GKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTTTCTTCTTCTACTACCTGTCTTCAACCTCAATTTCAACTTTCTCAGCCTCCTCTCAGCAATTTTCGGTCTACATTTTTTGGGGAGAAAAATGGCTTCTCTGT
TTCTACAATGCCTGTATGTCATATTGGTCTCTTGAGGAAGACTATAGATTGCAAGGAATCACGAATAGGAAAGCAACCAATTCAAGTGCCATCCAATGTAACCATCACAT
TGCAGGGTCAGGATTTGAAAGTTAAGGGTCCTTTGGGAGAACTTTCAATTCTTTATCCACGAGAAGTGAAGATTGAGAAGGAAGATTCTGGGATCTTAAAGGTCAAGAAG
GCACTGGAGACGCGAAGAGCCAATCAAATGCATGGGCTTTTCAGGACCCTTACGGACAATATGGTGGTAGGAGTATCGAAGGGGTTTGAAAAGAAACTTCAATTGGTTGG
TGTCGGTTATCGAGCAATTTTAGAAGGAAAAGACTTGGTATTGAATCTTGGGTTCTCTCATCCAGTTAGAATGACCATTCCTGAAGGTCTTCAAGTTAAGGTGGAAGAAA
ACACCAGAATTACAGTGAGTGGATATGACAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAATGGAGGCCCCCAGAACCTTACAAGGGTAAAGGAGTGAAATAT
GCTGATGAAATTGTCAGAAGAAAGGAGGGGAAAGCAGGGAAGAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATAAACTTATCCATTGAATTCCCACCTTATCCTTCTCGGCACCCATTGCCTGCAAGGCGCTGGCCGCTGTGTCATCTTCTTCGGAACCTGACCCGAAAGGGCTTTCTCGC
TCTTCCGTATTGGGTGTTCTCTTATCCACTGATAATGGCGCTTTCTTCTTCTACTACCTGTCTTCAACCTCAATTTCAACTTTCTCAGCCTCCTCTCAGCAATTTTCGGT
CTACATTTTTTGGGGAGAAAAATGGCTTCTCTGTTTCTACAATGCCTGTATGTCATATTGGTCTCTTGAGGAAGACTATAGATTGCAAGGAATCACGAATAGGAAAGCAA
CCAATTCAAGTGCCATCCAATGTAACCATCACATTGCAGGGTCAGGATTTGAAAGTTAAGGGTCCTTTGGGAGAACTTTCAATTCTTTATCCACGAGAAGTGAAGATTGA
GAAGGAAGATTCTGGGATCTTAAAGGTCAAGAAGGCACTGGAGACGCGAAGAGCCAATCAAATGCATGGGCTTTTCAGGACCCTTACGGACAATATGGTGGTAGGAGTAT
CGAAGGGGTTTGAAAAGAAACTTCAATTGGTTGGTGTCGGTTATCGAGCAATTTTAGAAGGAAAAGACTTGGTATTGAATCTTGGGTTCTCTCATCCAGTTAGAATGACC
ATTCCTGAAGGTCTTCAAGTTAAGGTGGAAGAAAACACCAGAATTACAGTGAGTGGATATGACAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAATGGAGGCC
CCCAGAACCTTACAAGGGTAAAGGAGTGAAATATGCTGATGAAATTGTCAGAAGAAAGGAGGGGAAAGCAGGGAAGAAGAAGTAGTGATGGTTTTAATTCCTAATTCATT
GTTGGTTTTTCTCTCTTTTTGAAATATTTGCATGTCTTGCTAGTATCAGAAAGGATTATTTGCATCATAATTTATGAGAGTTCATTTTTTTTTCCTCCCTTTTCTTAGTA
AATTTTCAGTTTAATACCATCAGTTGGGAAAATGGCACCGACGCCTCCAAAAGATCATCATCTAGTTTATACCTATGTATCTTGGACAATTCGACTTTCTTCCTGTGCTT
TGTGCAAGTGATGAGAATTGAACTCTGATATAATTTCTTTTTGCAACTTTTAAA
Protein sequenceShow/hide protein sequence
MALSSSTTCLQPQFQLSQPPLSNFRSTFFGEKNGFSVSTMPVCHIGLLRKTIDCKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEKEDSGILKVKK
ALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMTIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKY
ADEIVRRKEGKAGKKK