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Lsi11G013060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTubulin-tyrosine ligase
Genome locationchr11:21668527..21681953
RNA-Seq ExpressionLsi11G013060
SyntenyLsi11G013060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144902.1 uncharacterized protein LOC101221709 [Cucumis sativus]9.0e-3280Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTL+LYNFHK N  NNKRYK+ DS T+DEE++DR +M ED T+EDS+CIVSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI

XP_008451192.1 PREDICTED: uncharacterized protein LOC103492564 [Cucumis melo]7.6e-3180.22Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEE-HDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYN HK N   NKRYK+ +S T DEE ++DRGKMI+D TDEDS+CIVSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEE-HDDRGKMIEDGTDEDSMCIVSLKDMI

XP_022952714.1 uncharacterized protein LOC111455327 [Cucurbita moschata]3.2e-2976.92Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRN--DSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK  PNNKRYK+N   S+TSDEE+DD  K I     ED +C+VSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRN--DSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI

XP_022969263.1 uncharacterized protein LOC111468318 [Cucurbita maxima]4.2e-2976.92Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRND--STTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK  PNNKRYK+N+  S+TSDEE+DD  K I     E+ +CIVSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRND--STTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI

XP_038887596.1 uncharacterized protein LOC120077705 [Benincasa hispida]1.6e-3685.39Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRR+DEEGGNFVYREGTLDQTTLNLYNFHKNC N KR+++NDST SDEE+DDRGK+IED TDEDS+CIVSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI

TrEMBL top hitse value%identityAlignment
A0A0A0K4Z6 Uncharacterized protein4.4e-3280Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTL+LYNFHK N  NNKRYK+ DS T+DEE++DR +M ED T+EDS+CIVSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI

A0A1S3BQB8 uncharacterized protein LOC1034925643.7e-3180.22Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEE-HDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYN HK N   NKRYK+ +S T DEE ++DRGKMI+D TDEDS+CIVSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEE-HDDRGKMIEDGTDEDSMCIVSLKDMI

A0A6J1C2J2 uncharacterized protein LOC1110076747.4e-2467.03Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKN--CPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRN DRNRKWRRMDEEGGNFVYREGTLDQTTLN YNFHKN    N+    +  S    E+ D    MIED T+ED +CIVSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKN--CPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI

A0A6J1GMI7 uncharacterized protein LOC1114553271.5e-2976.92Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRN--DSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK  PNNKRYK+N   S+TSDEE+DD  K I     ED +C+VSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRN--DSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI

A0A6J1I0G9 uncharacterized protein LOC1114683182.0e-2976.92Show/hide
Query:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRND--STTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI
        +GLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK  PNNKRYK+N+  S+TSDEE+DD  K I     E+ +CIVSLKD+I
Subjt:  KGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRND--STTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAGGATTGCCATTGTATCGAAACCATGATCGAAATAGGAAGTGGCGTCGAATGGACGAAGAAGGTGGTAATTTTGTTTACAGAGAAGGGACTCTAGATCAAAC
AACACTCAATTTATATAATTTTCACAAGAATTGCCCAAATAACAAGAGATACAAAAGGAATGATAGTACTACGAGTGACGAAGAACATGACGACCGTGGAAAAATGATTG
AAGACGGTACAGATGAAGACTCCATGTGCATTGTTAGTTTAAAAGATATGATACTCACACATTCATCTTGGACAACGGTGGTCGACGGTGAATTAAAACTTTTAGTTACT
TGCTTTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAAGGATTGCCATTGTATCGAAACCATGATCGAAATAGGAAGTGGCGTCGAATGGACGAAGAAGGTGGTAATTTTGTTTACAGAGAAGGGACTCTAGATCAAAC
AACACTCAATTTATATAATTTTCACAAGAATTGCCCAAATAACAAGAGATACAAAAGGAATGATAGTACTACGAGTGACGAAGAACATGACGACCGTGGAAAAATGATTG
AAGACGGTACAGATGAAGACTCCATGTGCATTGTTAGTTTAAAAGATATGATACTCACACATTCATCTTGGACAACGGTGGTCGACGGTGAATTAAAACTTTTAGTTACT
TGCTTTATATAA
Protein sequenceShow/hide protein sequence
MKKGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDMILTHSSWTTVVDGELKLLVT
CFI