; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G013480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionsodium/potassium/calcium exchanger 1-like
Genome locationchr11:22104197..22104679
RNA-Seq ExpressionLsi11G013480
SyntenyLsi11G013480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462077.2 PREDICTED: gem-associated protein 2-like [Cucumis melo]6.3e-4777.36Show/hide
Query:  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVA-AMADGSRKIESK--VEIGEERENGLIAKEEEIEELITK
        MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ +EQS  NEAL A  MADG+RKIESK  VE+ EER NGL+  EE+ E LIT 
Subjt:  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVA-AMADGSRKIESK--VEIGEERENGLIAKEEEIEELITK

Query:  DEDEEERFNFY--------EEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL
        +EDEEERF  Y        EEEEEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Subjt:  DEDEEERFNFY--------EEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

XP_011658666.2 glutamic acid-rich protein [Cucumis sativus]1.2e-5377.84Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAA-MADGSRKIESKVEIGEERENGLIAK
        MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ DE+S GNEAL AA MADG+RKIESKVEI EER NGL+  
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAA-MADGSRKIESKVEIGEERENGLIAK

Query:  EEEIEELITKDEDEEERFNFYEEE---------------EEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL
        E++IE LIT +E EEERF  YEEE               EEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Subjt:  EEEIEELITKDEDEEERFNFYEEE---------------EEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

XP_022928452.1 uncharacterized protein LOC111435260 [Cucurbita moschata]1.0e-4171.34Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGL
        MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI  SGD  SGG+    EAL A+MADGS KIESKVE  EER NGL
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGL

Query:  IAKEEEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL
        I K+EE E  I +D+D ++     +++EEE      EELNKKCEEFIRKMK GIK ESQQ+LVL
Subjt:  IAKEEEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

XP_023530308.1 uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]8.0e-4271.34Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGL
        MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI  SGD  SGG+    EAL AAMADGS KIESKVE  EER NGL
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGL

Query:  IAKEEEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL
        I K+EE E  I +D+D        ++++EE      EELNKKCEEFIRKMK GIK ESQQ+LVL
Subjt:  IAKEEEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

XP_038888415.1 histone H3.v1-like [Benincasa hispida]1.0e-6594.38Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMADGSRKIESKVEIGEERENGLIAKE
        MKLVISASLLSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLIGNS DEQSG NEAL AAMADG+RKIESKVEI EERENGLIAKE
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMADGSRKIESKVEIGEERENGLIAKE

Query:  EEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL
        EE EELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQ+ VL
Subjt:  EEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

TrEMBL top hitse value%identityAlignment
A0A0A0K349 Uncharacterized protein1.5e-5483.23Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAA-MADGSRKIESKVEIGEERENGLIAK
        MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ DE+S GNEAL AA MADG+RKIESKVEI EER NGL+  
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAA-MADGSRKIESKVEIGEERENGLIAK

Query:  EEEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL
        E++IE LIT +E EEERF  Y   EEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Subjt:  EEEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

A0A1S3CG16 gem-associated protein 2-like3.0e-4777.36Show/hide
Query:  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVA-AMADGSRKIESK--VEIGEERENGLIAKEEEIEELITK
        MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ +EQS  NEAL A  MADG+RKIESK  VE+ EER NGL+  EE+ E LIT 
Subjt:  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVA-AMADGSRKIESK--VEIGEERENGLIAKEEEIEELITK

Query:  DEDEEERFNFY--------EEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL
        +EDEEERF  Y        EEEEEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Subjt:  DEDEEERFNFY--------EEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

A0A6J1C4P4 ATP-dependent RNA helicase MAK59.5e-4170.44Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMADGSRKIESKVEIGEERENGLIAKE
        MK++ISASLLSAMV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG SG+EQ GG             K+ESKVE GEERENGL+A++
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMADGSRKIESKVEIGEERENGLIAKE

Query:  EEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLV
        EE E+LIT+DE+ EE     EEEEEE+    +EELN+KCEEFIRKMK  IKFE QQ+LV
Subjt:  EEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLV

A0A6J1EJY9 uncharacterized protein LOC1114352605.0e-4271.34Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGL
        MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI  SGD  SGG+    EAL A+MADGS KIESKVE  EER NGL
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGN----EALVAAMADGSRKIESKVEIGEERENGL

Query:  IAKEEEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL
        I K+EE E  I +D+D ++     +++EEE      EELNKKCEEFIRKMK GIK ESQQ+LVL
Subjt:  IAKEEEIEELITKDEDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL

A0A6J1I0H9 sodium/potassium/calcium exchanger 1-like5.6e-4167.46Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGN-----EALVAAMADGSRKIESKVEIGEERENG
        MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI +SG EQ GG+     EAL AAM D +  IE KVE GEERENG
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGN-----EALVAAMADGSRKIESKVEIGEERENG

Query:  LIAKEEEIEELITKDEDEEERFNFYEEEEEEEEEEI----DEELNKKCEEFIRKMKEGIKFESQQMLVL
         IA+EE+  E +  +E++++     +EEE+ E EE+    +EEL+KK EEFIRKMK GIK ESQQ+L+L
Subjt:  LIAKEEEIEELITKDEDEEERFNFYEEEEEEEEEEI----DEELNKKCEEFIRKMKEGIKFESQQMLVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04495.1 unknown protein4.1e-0433.33Show/hide
Query:  KLVISASLLSAMVFYSSLLPF----LHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMAD------GSRKIESKVEIGEE
        K++  AS+ S ++ YSSL+      LH L++Y S+ + K YMFLLCNG++ FI+      GNS     G    ++    +         K++  V + EE
Subjt:  KLVISASLLSAMVFYSSLLPF----LHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMAD------GSRKIESKVEIGEE

Query:  RENGLIAKEEEIEE-----LITKDEDEEERFNFYEEEEE--------------EEEEEID------EELNKKCEEFIRKMKEGIKF
        +    ++KEEE EE     ++ +  +EEE     E +EE               ++EEI+      E+LNKKCE+FIRKMK  I+F
Subjt:  RENGLIAKEEEIEE-----LITKDEDEEERFNFYEEEEE--------------EEEEEID------EELNKKCEEFIRKMKEGIKF

AT2G04515.1 unknown protein3.1e-0432.77Show/hide
Query:  KLVISASLLSAMVFYSSLLPF----LHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMADGSRK--IESKV-EIGEEREN
        K++  AS+ S ++ YSSL+      LH L +Y S+ + K YMFLLCNG++ FI+      GNS     G    +V    +   K   E+KV ++    E 
Subjt:  KLVISASLLSAMVFYSSLLPF----LHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMADGSRK--IESKV-EIGEEREN

Query:  GLIAKEEEIEELITKDEDEEERFNFYEEE-------------EEEEEEEID------EELNKKCEEFIRKMKEGIKF
          ++KEEE   +++++E+EE      E+E             + ++++ I+      E+LNKKCE+FIRKMK  I++
Subjt:  GLIAKEEEIEELITKDEDEEERFNFYEEE-------------EEEEEEEID------EELNKKCEEFIRKMKEGIKF

AT3G13130.1 unknown protein9.2e-0434.07Show/hide
Query:  SLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGD-EQSGGNEALVAAMADGSR-----KIESKVEIGEERENGL---IA
        SLL++  FY  L  F+  L   ++  + KNYMFLLCNGL+V + + SGL+ +S   E+   N        D        ++E K + G   E+ L   + 
Subjt:  SLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGD-EQSGGNEALVAAMADGSR-----KIESKVEIGEERENGL---IA

Query:  KEEEIEELITKDEDEEE------RFNFYEEE--------EEEEEEEI------DEELNKKCEEFIRKMKEGIKFESQQMLVL
         EE+ +   T+D +EE+        N  EEE         EEEE  +      +EE+NKK +EFIRKMKE ++ E+++ L+L
Subjt:  KEEEIEELITKDEDEEE------RFNFYEEE--------EEEEEEEI------DEELNKKCEEFIRKMKEGIKFESQQMLVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTAGTGATCTCAGCTTCTCTACTCTCTGCAATGGTATTTTACTCTTCTCTCCTCCCTTTTCTCCACTCTTTAAACCTTTATATCTCTTCAACAATCCACAAGAA
CTACATGTTCTTGCTCTGCAATGGCCTTCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACTCCGGCGATGAACAGAGCGGCGGAAATGAAGCTCTAGTGGCTG
CAATGGCAGATGGGAGCAGAAAAATTGAGAGCAAAGTTGAAATTGGAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAATTGAAGAATTGATTACAAAGGAT
GAAGATGAAGAAGAAAGATTCAATTTTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAA
GGAAGGAATTAAATTTGAATCACAGCAAATGCTTGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTAGTGATCTCAGCTTCTCTACTCTCTGCAATGGTATTTTACTCTTCTCTCCTCCCTTTTCTCCACTCTTTAAACCTTTATATCTCTTCAACAATCCACAAGAA
CTACATGTTCTTGCTCTGCAATGGCCTTCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACTCCGGCGATGAACAGAGCGGCGGAAATGAAGCTCTAGTGGCTG
CAATGGCAGATGGGAGCAGAAAAATTGAGAGCAAAGTTGAAATTGGAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAATTGAAGAATTGATTACAAAGGAT
GAAGATGAAGAAGAAAGATTCAATTTTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAA
GGAAGGAATTAAATTTGAATCACAGCAAATGCTTGTTTTGTAA
Protein sequenceShow/hide protein sequence
MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEQSGGNEALVAAMADGSRKIESKVEIGEERENGLIAKEEEIEELITKD
EDEEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQMLVL