CuGenDBv2

Gene ID	Lsi11G013590
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	FAS1 domain-containing protein
Genome location	chr11:22193876..22194469
RNA-Seq Expression	Lsi11G013590
Synteny	Lsi11G013590
Gene Ontology terms	NA
InterPro domains	IPR000782 - FAS1 domain IPR036378 - FAS1 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004149424.1 uncharacterized protein LOC101220860 [Cucumis sativus]

7.2e-85

86.73

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MAPWFFVLLFLVAKA AT  NQ DLQAAMDEMRLKSYHGF ILL ILNS+ KTLQNS+ITFFMPTDQELSQA ISPD LE+FVLSHSIPTALLLNNLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNG+LVP+SIPNRMI ITNCRKMGVCLNNARI+TPNVC TSSIRCHGIS+ I+YD TSFSDTLPAKQSSAE  VQRNE KGAKSLQS AMKKNR L
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

XP_022928395.1 uncharacterized protein LOC111435225 [Cucurbita moschata]

1.1e-80

82.14

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MA WFFVLLFLV  A+ATT NQTDL+AAMD+MR+KSYHGFVILL ILNSSHK L NSDITFFMP DQELS+AAISPD +E+FVLSHSIPT L+L+NLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNGSLVP+SIPNRMIS+TNCRKMGVC+NNA+IVTPNVC  S+IRCHGIS+TI YDNTSFSD    K SSAET VQRNEKKGAKSLQ AAMKKNRPL
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

XP_022989473.1 uncharacterized protein LOC111486521 [Cucurbita maxima]

8.2e-81

83.16

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MA WFFVLLFLV  A+ATT NQTDL+AAMD+MR+KSYHGFVILL ILNSSHK L NSDITFFMP DQELS+AAISPD +E+FVLSHSIPT L+LNNLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNGSLVP+SIPNRMISITNCRKMGVC+NNA+IVTPNVC  S+IRCHGIS+TI YDNTSFSD    KQSSAET VQRNEKKGAKSLQ AAMKKNR L
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

XP_023529797.1 uncharacterized protein LOC111792513 [Cucurbita pepo subsp. pepo]

1.1e-80

82.14

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MA WFFVLLFLV  A+ATT NQTDL+AAMD+MR+KSYHGFVILL ILNSSHK L NSDITFFMP DQELS+AAISPD +E+FVLSHSIPT L+L+NLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNGSLVP+SIPNRMIS+TNCRKMGVC+NNA+IVTPNVC  S+IRCHGIS+TI YDNTSFSD    K SSAET VQRNEKKGAKSLQ AAMKKNRPL
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

XP_038887869.1 uncharacterized protein LOC120077861 [Benincasa hispida]

1.7e-94

94.39

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MAPWFFVLLFLVAKAQATTINQTDLQ AMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMP DQELS AAISPDGLEDFVLSHS+PTALLLNNLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNGSLVP+SIPNRMISITNCRKMGVC+NNARIVTPNVC TSSIRCHGISSTITYD TS SDTLPAKQSSAET VQRNEKK AKSLQSAAMKKNRPL
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7Q8 FAS1 domain-containing protein

3.5e-85

86.73

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MAPWFFVLLFLVAKA AT  NQ DLQAAMDEMRLKSYHGF ILL ILNS+ KTLQNS+ITFFMPTDQELSQA ISPD LE+FVLSHSIPTALLLNNLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNG+LVP+SIPNRMI ITNCRKMGVCLNNARI+TPNVC TSSIRCHGIS+ I+YD TSFSDTLPAKQSSAE  VQRNE KGAKSLQS AMKKNR L
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

A0A1S3CGC4 uncharacterized protein LOC107990279

1.2e-80

82.74

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MAPWFFVLLFL+ KA AT  NQ DLQAAMD+MRLKSYHGF ILL ILNS+ KTLQNS+ITFFMPTDQELSQA ISP+ L+DFVLSHSIPTALLLNNLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTS-FSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNGSLVP+SIPNRMI ITNCRKMGVC+NNARI+TPNVC TSSIRCHGISS I+YD TS FSDTLPAKQSSA+  VQRNE  GAKS +S AMKKNR L
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTS-FSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

A0A5D3E7C1 Fasciclin-like arabinogalactan protein 19

1.2e-80

82.74

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MAPWFFVLLFL+ KA AT  NQ DLQAAMD+MRLKSYHGF ILL ILNS+ KTLQNS+ITFFMPTDQELSQA ISP+ L+DFVLSHSIPTALLLNNLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTS-FSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNGSLVP+SIPNRMI ITNCRKMGVC+NNARI+TPNVC TSSIRCHGISS I+YD TS FSDTLPAKQSSA+  VQRNE  GAKS +S AMKKNR L
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTS-FSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

A0A6J1ERK4 uncharacterized protein LOC111435225

5.2e-81

82.14

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MA WFFVLLFLV  A+ATT NQTDL+AAMD+MR+KSYHGFVILL ILNSSHK L NSDITFFMP DQELS+AAISPD +E+FVLSHSIPT L+L+NLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNGSLVP+SIPNRMIS+TNCRKMGVC+NNA+IVTPNVC  S+IRCHGIS+TI YDNTSFSD    K SSAET VQRNEKKGAKSLQ AAMKKNRPL
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

A0A6J1JQD1 uncharacterized protein LOC111486521

4.0e-81

83.16

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Query:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF
        MA WFFVLLFLV  A+ATT NQTDL+AAMD+MR+KSYHGFVILL ILNSSHK L NSDITFFMP DQELS+AAISPD +E+FVLSHSIPT L+LNNLLHF
Subjt:  MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHF

Query:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL
        PNGSLVP+SIPNRMISITNCRKMGVC+NNA+IVTPNVC  S+IRCHGIS+TI YDNTSFSD    KQSSAET VQRNEKKGAKSLQ AAMKKNR L
Subjt:  PNGSLVPTSIPNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16920.1 Fasciclin-like arabinogalactan family protein

4.1e-22

38.82

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Query:  NQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAI--SPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISIT
        N  +L  A++EM   +Y  FV+L+N+L S +     +++TF MP D+ LS + I    D + +F+L HSIP++LL  +L   PNGS+VP+S+P+  + I+
Subjt:  NQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAI--SPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISIT

Query:  NCRKMGVCLNNARIVTPNVCSTSSIRCHGIS------STITYDNTSFSDTLP
        N  +    LNN +I++ N+CS  SI+CHGI       ST+  D+   + TLP
Subjt:  NCRKMGVCLNNARIVTPNVCSTSSIRCHGIS------STITYDNTSFSDTLP

AT5G26730.1 Fasciclin-like arabinogalactan family protein

8.6e-36

52.86

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Query:  NQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC
        NQTDL +AM +MR +SY+GFVILL  LN ++   +N+DITF MP+D ++S A I+P+ LE F+L H+IP  L++N++LHFPN +LVP S  +RM +IT  
Subjt:  NQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC

Query:  RKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFS
           G+ +NNARIVTPNVC  S I CHGIS  I+++    S
Subjt:  RKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFS

Sequences

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CDS sequence

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ATGGCTCCCTGGTTTTTTGTTCTTCTCTTCTTAGTAGCAAAAGCTCAGGCTACAACGATCAACCAAACCGACCTGCAAGCGGCCATGGATGAGATGAGATTGAAATCTTA
CCATGGCTTTGTCATACTACTCAATATCTTAAACAGCTCCCATAAAACCTTGCAAAACTCAGATATAACCTTCTTCATGCCCACTGATCAGGAACTTTCTCAAGCTGCAA
TCTCCCCGGACGGACTAGAAGATTTTGTTCTAAGCCATTCTATCCCCACAGCATTACTGCTCAACAATCTTTTACACTTCCCAAATGGCAGCCTGGTTCCAACAAGCATC
CCAAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTGTGTTTGAACAATGCACGAATTGTCACCCCGAACGTGTGCTCAACCTCATCCATAAGATGTCATGG
TATAAGCTCAACTATCACATATGATAACACTTCCTTTTCAGATACTTTACCAGCCAAGCAGAGTTCAGCTGAAACTACAGTTCAGCGGAATGAAAAGAAAGGAGCAAAAT
CTTTACAGTCTGCAGCAATGAAGAAGAACCGTCCACTGCTTTGA

mRNA sequence

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Protein sequence

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MAPWFFVLLFLVAKAQATTINQTDLQAAMDEMRLKSYHGFVILLNILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSI
PNRMISITNCRKMGVCLNNARIVTPNVCSTSSIRCHGISSTITYDNTSFSDTLPAKQSSAETTVQRNEKKGAKSLQSAAMKKNRPLL

Lsi11G013590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome