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Lsi11G013650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:22249047..22250372
RNA-Seq ExpressionLsi11G013650
SyntenyLsi11G013650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG1859694.1 unnamed protein product, partial [Musa acuminata subsp. malaccensis]4.6e-0834.3Show/hide
Query:  AAVPEATSRVAI-EERSSESGVDLEGGAVVYGSHFSSVQGGGGR-----------------NWVKNVREYNNIAGVWVGEGDENTSSGHPRRRGVDSPAN
        AAVP      A+  E      +DL  GA  +G   ++  GGGG                    V++  E    A   VGEGDE   +GH    GV++P +
Subjt:  AAVPEATSRVAI-EERSSESGVDLEGGAVVYGSHFSSVQGGGGR-----------------NWVKNVREYNNIAGVWVGEGDENTSSGHPRRRGVDSPAN

Query:  PAGGRNEIAEEDKVQSGIVGVKSPSNGGLLGWEIHTFLEGFGGSDGGAMGGECDRDERREEEKEEMTTEHGG
        PAGG +E A E +V+ G+ GV  P  GG L  E    L G G    GA GG     + +EEE+EE    H G
Subjt:  PAGGRNEIAEEDKVQSGIVGVKSPSNGGLLGWEIHTFLEGFGGSDGGAMGGECDRDERREEEKEEMTTEHGG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAACCACGCCGGACCTAGGGCTTGCACGTGTCGGAGGTATCGGGCTGTGACGGCGCCGATTGGGAGTAGAAGTCCCCAGGATACGGCGTTGAGGATGCCGTGGAT
AATTTTAAGTGTCTCGATGTCGTCGCTCTGGCTTGCGGCGGTGCCGGAGGCGACGTCGAGAGTTGCAATTGAAGAGAGGTCGTCGGAGAGTGGCGTAGATTTGGAGGGCG
GCGCCGTTGTGTACGGTAGCCATTTTTCCTCCGTACAAGGCGGCGGAGGAAGAAATTGGGTCAAGAATGTAAGGGAGTACAACAATATTGCCGGAGTTTGGGTCGGAGAA
GGCGATGAGAACACGAGCTCCGGTCATCCCCGGCGACGAGGGGTTGATTCCCCAGCCAACCCAGCCGGAGGGAGAAATGAAATTGCCGAAGAAGACAAGGTCCAAAGTGG
CATTGTGGGGGTGAAAAGTCCAAGCAATGGAGGCTTGTTGGGTTGGGAGATTCATACATTTTTGGAAGGTTTTGGTGGCAGTGACGGTGGTGCAATGGGCGGAGAGTGCG
ACAGAGATGAAAGAAGAGAGGAGGAGAAGGAAGAGATGACGACGGAGCATGGTGGCCGGCGGTGGAGTAATGAGAGAACGGTGGGTGAATTGAAGGGGATAATGAAATAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAATCATAGCAAACGTGTCAAATAGTCTCTGTATCGTCTTCTTCATCTTCATTTAGTTATAGCTTCCACTTTCCTTCTCAGAAGCTCCAATCAATCCCT
CTCTTCTCATCTTCTCCTCCTGCGATTTTCTACAAAAAACAACCCATGAATTCACCTCCAATGCCACACAAATCCCTACCAGCGTCGAAAGCCCTAAGCAATAAGCTAAT
TTCGCGTACGATCCACTCGCCGCCATCGCCTCAAATCCTTGGAACACGTTCACCGTTCCCATCACCACACACGCATATCCGACGAAATGATGAACCACGCCGGACCTAGG
GCTTGCACGTGTCGGAGGTATCGGGCTGTGACGGCGCCGATTGGGAGTAGAAGTCCCCAGGATACGGCGTTGAGGATGCCGTGGATAATTTTAAGTGTCTCGATGTCGTC
GCTCTGGCTTGCGGCGGTGCCGGAGGCGACGTCGAGAGTTGCAATTGAAGAGAGGTCGTCGGAGAGTGGCGTAGATTTGGAGGGCGGCGCCGTTGTGTACGGTAGCCATT
TTTCCTCCGTACAAGGCGGCGGAGGAAGAAATTGGGTCAAGAATGTAAGGGAGTACAACAATATTGCCGGAGTTTGGGTCGGAGAAGGCGATGAGAACACGAGCTCCGGT
CATCCCCGGCGACGAGGGGTTGATTCCCCAGCCAACCCAGCCGGAGGGAGAAATGAAATTGCCGAAGAAGACAAGGTCCAAAGTGGCATTGTGGGGGTGAAAAGTCCAAG
CAATGGAGGCTTGTTGGGTTGGGAGATTCATACATTTTTGGAAGGTTTTGGTGGCAGTGACGGTGGTGCAATGGGCGGAGAGTGCGACAGAGATGAAAGAAGAGAGGAGG
AGAAGGAAGAGATGACGACGGAGCATGGTGGCCGGCGGTGGAGTAATGAGAGAACGGTGGGTGAATTGAAGGGGATAATGAAATAA
Protein sequenceShow/hide protein sequence
MMNHAGPRACTCRRYRAVTAPIGSRSPQDTALRMPWIILSVSMSSLWLAAVPEATSRVAIEERSSESGVDLEGGAVVYGSHFSSVQGGGGRNWVKNVREYNNIAGVWVGE
GDENTSSGHPRRRGVDSPANPAGGRNEIAEEDKVQSGIVGVKSPSNGGLLGWEIHTFLEGFGGSDGGAMGGECDRDERREEEKEEMTTEHGGRRWSNERTVGELKGIMK