; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G013740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionExopolygalacturonase-like
Genome locationchr11:22309399..22310921
RNA-Seq ExpressionLsi11G013740
SyntenyLsi11G013740
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059139.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.9e-7946.63Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD
        MGLRSNIMALLL +LL++ ST K QS+FD+TTYGAKPNTDITQ LANAWKDACAS +PS+LL+P GVYQLNQS L GPC S+IEV++EGTLQA  D  G 
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD

Query:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------
        GLVLF +IDQLT+                                                                                       
Subjt:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP
                                                                               IK WPD A A+ ASDLHFEDIEMVNVSNP
Subjt:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP

Query:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS
        IIIDQEYCPSNQCNK I SKIKI NVSFKNIRGTSATPVA+K +CSKD+PCE VEV DI+L+YTGT+G ITSQ   + P ITGKQNPRAC EVAPIN+PS
Subjt:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS

Query:  S
        +
Subjt:  S

XP_008455507.2 PREDICTED: exopolygalacturonase-like [Cucumis melo]3.7e-7846.38Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD
        MGLRSNIMALLL LLL++ ST K QS+FD+TTYGAKPNTDITQ LANAWKDACAS +PS+LL+P GVYQLNQS L GPC S+IEV++EGTLQA  D  G 
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD

Query:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------
        GLVLF +IDQLT+                                                                                       
Subjt:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP
                                                                               IK WPD A A+ ASDLHFEDIEMVNVSNP
Subjt:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP

Query:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS
        IIIDQEYCPSNQCNK I SKIKI NVSFKNIRGTSAT VA+K +CSKD+PC+ VEV DI+L+YTGT+G ITSQ   + P ITGKQNPRAC EVAPIN+PS
Subjt:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS

Query:  S
        +
Subjt:  S

XP_011658673.1 exopolygalacturonase [Cucumis sativus]9.9e-7644.89Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD
        MGL+SNIMALLL LLL++ ST KGQS+FD+TTYGAKPNTDITQALANAWKDACAS + S LL+P GVYQLNQS L+GPCKS+I+ ++EGTLQA  +  G+
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD

Query:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------
         +VLF +IDQLT+                                                                                       
Subjt:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP
                                                                               IK WPD ASA+ ASDLHFEDIEMVNVSNP
Subjt:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP

Query:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS
        ++I+QEYCP +QC+K I SKIKISNVSFKNIRGTSAT VA++L+CSKD+PCE VEV DIDLTYTGT+G ITSQ   + P ITGKQNPRAC E APINA S
Subjt:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS

Query:  S
        +
Subjt:  S

XP_031744868.1 exopolygalacturonase [Cucumis sativus]4.3e-7946.88Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD
        MGLRSNIM LLL LLL++ ST KGQS+FD+TTYGAKPNTDITQALANAWKDACAS   SKLL+P GVY LNQS L+GPCKS+IEV++EGTLQA  D  GD
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD

Query:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------
        GLVLF YIDQLTL                                                                                       
Subjt:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP
                                                                               IK WPD A A+ ASDLHFEDIEMVNVSNP
Subjt:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP

Query:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS
        +IIDQEYCPSNQCNK I SKIKI+NVSFKNIRGTSAT VAVK +CS    CEGVEVTDIDL Y GT+G ITSQ   + P ITGKQNPRAC E AP+N+PS
Subjt:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS

Query:  S
        +
Subjt:  S

XP_038895545.1 exopolygalacturonase-like [Benincasa hispida]7.6e-7643.92Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQS--VFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQ
        MGLRSN +A L+PLLLL+ S  K QS  +FDVTT+GAKPN DIT ALA AWK ACAS +PSK+L+P+  Y+L+QSNLNGPCKSSIE Q+EGTLQAP D +
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQS--VFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQ

Query:  GDGLVLFHYIDQLTL-------------------------------------------------------------------------------------
        GDGL++  Y+DQLT+                                                                                     
Subjt:  GDGLVLFHYIDQLTL-------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVS
                                                                                 IK WPD   AFPA D+HFEDIEMVNVS
Subjt:  -------------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVS

Query:  NPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINA
        NPIIIDQEYCP NQCN+ + SKIKIS VSFKNI+GTSATPVAVKLVCSK +PCEGVEV DIDL+Y+G++GPITSQ A +NP ++GKQNPR C E API+A
Subjt:  NPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINA

Query:  PSS
        PS+
Subjt:  PSS

TrEMBL top hitse value%identityAlignment
A0A1S3C129 exopolygalacturonase-like1.8e-7846.38Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD
        MGLRSNIMALLL LLL++ ST K QS+FD+TTYGAKPNTDITQ LANAWKDACAS +PS+LL+P GVYQLNQS L GPC S+IEV++EGTLQA  D  G 
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD

Query:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------
        GLVLF +IDQLT+                                                                                       
Subjt:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP
                                                                               IK WPD A A+ ASDLHFEDIEMVNVSNP
Subjt:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP

Query:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS
        IIIDQEYCPSNQCNK I SKIKI NVSFKNIRGTSAT VA+K +CSKD+PC+ VEV DI+L+YTGT+G ITSQ   + P ITGKQNPRAC EVAPIN+PS
Subjt:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS

Query:  S
        +
Subjt:  S

A0A1S4E3K9 exopolygalacturonase-like4.5e-7445.43Show/hide
Query:  LLPLLLL--VPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKS-SIEVQVEGTLQAPIDSQGDGLVLFHY
        LLP LLL  + ST +GQS+FDVTTYGAKPNTDITQALANAW +ACAS +PS LL+P+GVYQL+QSNL GPCKS  I+VQVEGTLQAPI ++GDGLVLF Y
Subjt:  LLPLLLL--VPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKS-SIEVQVEGTLQAPIDSQGDGLVLFHY

Query:  IDQLTL----------------------------------------------------------------------------------------------
        IDQL L                                                                                              
Subjt:  IDQLTL----------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEY
                                                                        IK WPD ASA+ ASDLHFEDIEMVNVSNPIII+QEY
Subjt:  ----------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEY

Query:  CPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPSS
        C SNQCN  I SKIKI NVSFKNIRGTSAT VAVK +CSKD+PCEGVEV DIDL Y G  GPI SQ A +  T+TGKQNP+ C +VAPI APS+
Subjt:  CPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPSS

A0A5A7TRZ0 Exopolygalacturonase-like8.5e-7342.82Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQS---VFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDS
        MGL SN +  LLP+LLL+ S +K QS   VFD+T YGAKPN D+T ALA+AWK+ACAS +PSK+L+P+G Y L+QSNL GPCKS+IE+Q+EGTLQAP D 
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQS---VFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDS

Query:  QGDGLVLFHYIDQLTL------------------------------------------------------------------------------------
        +GDGL+L  Y+DQLT+                                                                                    
Subjt:  QGDGLVLFHYIDQLTL------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNV
                                                                                  IK WPD A AFPASD+HFEDIEMVNV
Subjt:  --------------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNV

Query:  SNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPIN
        SNP+IIDQEYCP NQCN+ + SKIKISNVSFKNIRGTSATPVAVK+VCS+  PCEGVEV DIDLTY+G+ GPI SQ A + P I+GKQNP  C E AP  
Subjt:  SNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPIN

Query:  APSS
         PSS
Subjt:  APSS

A0A5D3DDK3 Exopolygalacturonase-like9.4e-8046.63Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD
        MGLRSNIMALLL +LL++ ST K QS+FD+TTYGAKPNTDITQ LANAWKDACAS +PS+LL+P GVYQLNQS L GPC S+IEV++EGTLQA  D  G 
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGD

Query:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------
        GLVLF +IDQLT+                                                                                       
Subjt:  GLVLFHYIDQLTL---------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP
                                                                               IK WPD A A+ ASDLHFEDIEMVNVSNP
Subjt:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP

Query:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS
        IIIDQEYCPSNQCNK I SKIKI NVSFKNIRGTSATPVA+K +CSKD+PCE VEV DI+L+YTGT+G ITSQ   + P ITGKQNPRAC EVAPIN+PS
Subjt:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS

Query:  S
        +
Subjt:  S

A0A6J1DJH0 polygalacturonase-like2.6e-7452.26Show/hide
Query:  VFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGDGLVLFHYIDQLTL-------------
        VFDVTTYGAKP+TDIT AL NAWK+ACAS +PSK+L+P+G YQ   + +NGPCKSSIE+QVEGTL+AP + +G+G +   Y+D LT+             
Subjt:  VFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGDGLVLFHYIDQLTL-------------

Query:  ----------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQC
                                                                  IK WPD A +FPA+D+HFEDIEM NVS PIIIDQEYCP NQC
Subjt:  ----------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQC

Query:  NKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS
        N+ + S IKIS VSFKNIRGTSATP+AVK+VCSK +PCEGVE+ DIDLTY G++GPI SQ A + P ITGKQNP  C EVAP +APS
Subjt:  NKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAPS

SwissProt top hitse value%identityAlignment
Q05967 Polygalacturonase3.5e-3930.39Show/hide
Query:  LPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPID---------------
        L LL L         VFD+T YGA  N DI++AL NA+K+AC S SPS +++P+G + +NQ  L GPCKS +E+Q++ TL+AP D               
Subjt:  LPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPID---------------

Query:  ----SQGDGLV------------------------------------------LFH--------------------------------------------
              G G++                                           FH                                            
Subjt:  ----SQGDGLV------------------------------------------LFH--------------------------------------------

Query:  ---------------YIDQLTL--------------------------------------IKIWPDFASAFP--ASDLHFEDIEMVNVSNPIIIDQEYCP
                       YI ++T                                       IK WP   ++ P   +D+HFEDI + NVSNP++IDQ YCP
Subjt:  ---------------YIDQLTL--------------------------------------IKIWPDFASAFP--ASDLHFEDIEMVNVSNPIIIDQEYCP

Query:  SNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVA
         N+CNK + S++KIS VSF+NI+GTS T  AV L+ SK +PCEG+EV DID+TY+G  GP  S    + P++ GKQNP  CT  A
Subjt:  SNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVA

Q39766 Polygalacturonase2.6e-3429.22Show/hide
Query:  NIMALLLPLLLLVPSTTKGQ-SVFDVTT-YGAKPN--TDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDS----
        NI+  +  LLLL  S +K Q   FDV   +GAK +  TD+++   +AWK+ACAS++PS +++P+G Y L++ NL GPCK+ IE+ V+GT+QAP D     
Subjt:  NIMALLLPLLLLVPSTTKGQ-SVFDVTT-YGAKPN--TDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDS----

Query:  ---------------------QGDGLV---------------------------------------LFH-------------------------------
                              G G +                                       LFH                               
Subjt:  ---------------------QGDGLV---------------------------------------LFH-------------------------------

Query:  ----------------------------YIDQLTL--------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVS
                                     I ++T                                       IK WP        S++HFEDI M NVS
Subjt:  ----------------------------YIDQLTL--------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVS

Query:  NPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAP
        +PI+IDQ+YCP N+C K+  SK+K+SN+SFKNIRGTSA P A+K +CS   PC+ VE+ DID+ + G   P TSQ   + P   GK NP  C+   P
Subjt:  NPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAP

Q39786 Polygalacturonase5.2e-3529.47Show/hide
Query:  NIMALLLPLLLLVPSTTKGQS-VFDVTT-YGAKPN--TDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDS----
        NI+  +  LLLL  S +K QS  FDV   +GAK +  TD+++   +AWK+ACAS++PS +++P+G Y L++ NL GPCK+ IE+ V+GT+QAP D     
Subjt:  NIMALLLPLLLLVPSTTKGQS-VFDVTT-YGAKPN--TDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDS----

Query:  ---------------------QGDGLV---------------------------------------LFH-------------------------------
                              G G +                                       LFH                               
Subjt:  ---------------------QGDGLV---------------------------------------LFH-------------------------------

Query:  ----------------------------YIDQLTL--------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVS
                                     I ++T                                       IK WP        S++HFEDI M NVS
Subjt:  ----------------------------YIDQLTL--------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVS

Query:  NPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAP
        +PI+IDQ+YCP N+C K+  SK+K+SN+SFKNIRGTSA P A+K +CS   PC+ VE+ DID+ + G   P TSQ   + P  +GK NP  C+   P
Subjt:  NPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAP

Q40312 Polygalacturonase1.8e-3527.42Show/hide
Query:  ALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQ----GDGLVL
        A+++  L +         V D++ +G KPN+DI QAL +AW +ACAS + +K+++P G YQLN   L GPCK+ IE+QV+GT+QAP D       +    
Subjt:  ALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQ----GDGLVL

Query:  FHYIDQLTL-------------------------------------------------------------------------------------------
        F Y+D LTL                                                                                           
Subjt:  FHYIDQLTL-------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP
                                                                               IK WPD       SD+HFEDI M NV NP
Subjt:  -----------------------------------------------------------------------IKIWPDFASAFPASDLHFEDIEMVNVSNP

Query:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITG
        +IIDQEY P NQC+K   SKIK+S +SFKN++GTS T   V L+CS  +PC+GVE+ ++DL + G   P T++   + P +TG
Subjt:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITG

W8P8Q3 Probable galacturan 1,4-alpha-galacturonidase SALK66.1e-3628.32Show/hide
Query:  MALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPID-----------
        + LL+ L  L  S  + Q   D+T +GAKPN D T AL  AWK+ACA+ +P+K++VP G + LN   L GPCK+ + +++ G  +AP D           
Subjt:  MALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPID-----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------SQGDGLVLFHY-------------------------------------IDQLTLIKIWPDFASAFPASDLHFEDIEMVNVSNP
                         S GDG V  H                                       D    IK W +   A  ASDLHFEDI + NV NP
Subjt:  -----------------SQGDGLVLFHY-------------------------------------IDQLTLIKIWPDFASAFPASDLHFEDIEMVNVSNP

Query:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAP
        +IIDQEYCP N C +   SK+K+S +SFKN+ G + +   VKL+CS  +PC+GVE+ DIDLT+ G  G   SQ   + P +TGKQNP AC   A   AP
Subjt:  IIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAVLNPTITGKQNPRACTEVAPINAP

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein4.1e-3556.91Show/hide
Query:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT
        IK WP  A +  ASD+HFEDI + +VSNPI+IDQEYCP NQCNK   S IK+ N+SFKNIRGTS    AVKL+CSK  PC+ VE+ DID+ Y G  GP T
Subjt:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT

Query:  SQYAVLNPTITGKQNPRACTEVA
           + ++P I G Q+P+AC+  A
Subjt:  SQYAVLNPTITGKQNPRACTEVA

AT3G07820.1 Pectin lyase-like superfamily protein6.3e-1246.15Show/hide
Query:  DVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQA
        +V T G+   +DITQAL  A+  AC S SPSK+++P+G ++L +  + GPCK+ IEV ++GT++A
Subjt:  DVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQA

AT3G07830.1 Pectin lyase-like superfamily protein6.5e-3352.34Show/hide
Query:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT
        IK WP  A +  AS++HFE+I + NVSNPI+IDQEYCP NQCNK   S IK++N+SF+ IRGTS    AVKL+CSK  PCE V+V DI++ YTG  GP T
Subjt:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT

Query:  SQYAVLNPTITGKQNPRACTEVAPINAP
           + + P + G Q P+AC     +  P
Subjt:  SQYAVLNPTITGKQNPRACTEVAPINAP

AT3G07830.1 Pectin lyase-like superfamily protein2.9e-0940Show/hide
Query:  DVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQA
        +V    + P +DITQAL  A+  AC S +P K+++P+G ++L +  ++GPCKS +E+ + GT+ A
Subjt:  DVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQA

AT3G07840.1 Pectin lyase-like superfamily protein5.5e-3255.83Show/hide
Query:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT
        IK WP  A A  AS +HFE+I + NVSNPI+IDQEYCP NQCNK   S IK+ ++SFKNIRGTS    AVKL+CSK  PC  VE+ +I+L Y G  GP T
Subjt:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT

Query:  SQYAVLNPTITGKQNPRACT
           + ++P + G QNP+AC+
Subjt:  SQYAVLNPTITGKQNPRACT

AT3G07840.1 Pectin lyase-like superfamily protein1.3e-0936.56Show/hide
Query:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQA
        MG    I A+L  + LL    +    VF+V   G  P +DITQAL  A+  AC + + SK+++ +G ++L +  + GPCK+ +E+ ++GTL+A
Subjt:  MGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQA

AT3G14040.1 Pectin lyase-like superfamily protein5.2e-3051.22Show/hide
Query:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT
        IK WP       AS++ FEDI M NVS P++IDQEYCP   C   + SK+K+S+V+ KNI+GTSAT VAVKL+CSK +PC  + ++DI+L + G  GP  
Subjt:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT

Query:  SQYAVLNPTITGKQNPRACTEVA
        S  + + P ++GK  P ACTEVA
Subjt:  SQYAVLNPTITGKQNPRACTEVA

AT5G48140.1 Pectin lyase-like superfamily protein2.0e-3454.69Show/hide
Query:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT
        IK WP  A    ASD+HFE+I + NVSNPI+IDQEYCP NQCNK   S IK++N+SFK IRGTS    AVKL+CSK  PC+ VEV D+++ YTG  GP T
Subjt:  IKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPIT

Query:  SQYAVLNPTITGKQNPRACTEVAPINAP
         Q + ++P + G Q P+AC+  +P+  P
Subjt:  SQYAVLNPTITGKQNPRACTEVAPINAP

AT5G48140.1 Pectin lyase-like superfamily protein2.8e-0736.51Show/hide
Query:  PNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQG
        P +DIT AL  A+ +AC   + S +++P+G Y+L +  + GPCK+ I + + GT++A  ++ G
Subjt:  PNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGGGATTGAGATCAAACATTATGGCATTACTATTACCTTTATTGTTATTGGTGCCATCAACTACTAAAGGTCAATCTGTATTTGACGTCACTACATACGGTGC
CAAACCTAATACTGATATTACTCAGGCCTTGGCAAATGCATGGAAGGACGCATGTGCGTCGATCAGTCCCAGTAAATTGTTGGTTCCAGAAGGAGTTTACCAATTAAACC
AATCCAATCTCAATGGTCCTTGCAAGAGTTCTATCGAGGTTCAGGTCGAAGGGACATTACAAGCTCCTATCGATTCACAAGGAGATGGATTGGTTCTTTTTCATTATATT
GATCAATTAACGTTGATCAAAATATGGCCAGATTTTGCAAGTGCATTCCCAGCCTCTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTCAGCAATCCTATCATTAT
AGACCAAGAATATTGTCCCTCGAATCAATGCAACAAAAGCATTCTATCAAAAATTAAGATAAGCAATGTTAGTTTCAAGAATATCAGAGGCACTTCTGCTACTCCCGTTG
CAGTTAAACTTGTTTGTAGCAAAGATATACCATGTGAAGGTGTGGAAGTTACTGATATTGACCTAACTTACACTGGAACTCGAGGACCGATTACGTCTCAGTATGCAGTA
CTAAATCCCACCATTACGGGAAAGCAAAACCCTCGTGCATGTACTGAAGTTGCTCCTATTAATGCTCCATCATCAATGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATGGGATTGAGATCAAACATTATGGCATTACTATTACCTTTATTGTTATTGGTGCCATCAACTACTAAAGGTCAATCTGTATTTGACGTCACTACATACGGTGC
CAAACCTAATACTGATATTACTCAGGCCTTGGCAAATGCATGGAAGGACGCATGTGCGTCGATCAGTCCCAGTAAATTGTTGGTTCCAGAAGGAGTTTACCAATTAAACC
AATCCAATCTCAATGGTCCTTGCAAGAGTTCTATCGAGGTTCAGGTCGAAGGGACATTACAAGCTCCTATCGATTCACAAGGAGATGGATTGGTTCTTTTTCATTATATT
GATCAATTAACGTTGATCAAAATATGGCCAGATTTTGCAAGTGCATTCCCAGCCTCTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTCAGCAATCCTATCATTAT
AGACCAAGAATATTGTCCCTCGAATCAATGCAACAAAAGCATTCTATCAAAAATTAAGATAAGCAATGTTAGTTTCAAGAATATCAGAGGCACTTCTGCTACTCCCGTTG
CAGTTAAACTTGTTTGTAGCAAAGATATACCATGTGAAGGTGTGGAAGTTACTGATATTGACCTAACTTACACTGGAACTCGAGGACCGATTACGTCTCAGTATGCAGTA
CTAAATCCCACCATTACGGGAAAGCAAAACCCTCGTGCATGTACTGAAGTTGCTCCTATTAATGCTCCATCATCAATGGACTAA
Protein sequenceShow/hide protein sequence
MSMGLRSNIMALLLPLLLLVPSTTKGQSVFDVTTYGAKPNTDITQALANAWKDACASISPSKLLVPEGVYQLNQSNLNGPCKSSIEVQVEGTLQAPIDSQGDGLVLFHYI
DQLTLIKIWPDFASAFPASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKSILSKIKISNVSFKNIRGTSATPVAVKLVCSKDIPCEGVEVTDIDLTYTGTRGPITSQYAV
LNPTITGKQNPRACTEVAPINAPSSMD