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Lsi11G013780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglutamic acid-rich protein-like
Genome locationchr11:22339537..22340814
RNA-Seq ExpressionLsi11G013780
SyntenyLsi11G013780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059152.1 glutamic acid-rich protein-like [Cucumis melo var. makuwa]3.8e-1662.91Show/hide
Query:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEE-EESDKVEVV-EKSSD--SETAASNEKNEPAA---EEEEEDEEEVVILTDDDEEA
        MATVETVSPNA L+EDTT++KET  KEEVEE S P +T +EKVEE EES KVEVV E+SSD  SE   SNEK E  A   EEEEE+E+EVVILTDDDE  
Subjt:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEE-EESDKVEVV-EKSSD--SETAASNEKNEPAA---EEEEEDEEEVVILTDDDEEA

Query:  EE-ESNAVEEAVKEENNNPDETS-APEAEA----PAKEEDEKKEAPAEKTE
        E  ES    E  KEEN+ PDE S   EA+A     A+E+DEKKEA  EK E
Subjt:  EE-ESNAVEEAVKEENNNPDETS-APEAEA----PAKEEDEKKEAPAEKTE

KAG6572249.1 hypothetical protein SDJN03_28977, partial [Cucurbita argyrosperma subsp. sororia]9.0e-2668.79Show/hide
Query:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESN
        MATVET+SPNAAL+E+T VLKETA KE VEEP+PPAVTPEEK E+EES +VE V +   SE    NEK E   EEE  EE+EEEVVILT D+ +AEEE  
Subjt:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESN

Query:  AVEEAVKEENNNPDETSAPEAEAPA-KEEDEKKEAPAEKTE
        AV E  KEE+++PDE+SAPEA+APA +EEDEKKEAPAEKTE
Subjt:  AVEEAVKEENNNPDETSAPEAEAPA-KEEDEKKEAPAEKTE

KAG7011879.1 hypothetical protein SDJN02_26786, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2163.19Show/hide
Query:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESN
        M    T+SPNAAL+E+T VLKETA +E VEEP+PPAVTPE K E+EES +VE V +   SE    NEK E   EEE  EE+EEEVVILT D+ +AEEE  
Subjt:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESN

Query:  AVEEAVKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKTE
        AV E  KEE+++PDE+ APEA+AP    AKEEDEKKEAPAEKTE
Subjt:  AVEEAVKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKTE

XP_022968885.1 glutamic acid-rich protein-like [Cucurbita maxima]2.1e-2265Show/hide
Query:  ETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESNAVEE
        +T+SPNAAL+E+T VLKETA KEEVEEP+ PAVTPEEK E+EES +VE V +   S+    NEK E   EEE  EE+EEEVVILT D+ EAEEE  AV E
Subjt:  ETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESNAVEE

Query:  AVKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKTE
          KEE+++P+E+SAPEA+ P    AKEEDEKKEAPAEKTE
Subjt:  AVKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKTE

XP_023511645.1 glutamic acid-rich protein-like [Cucurbita pepo subsp. pepo]3.1e-2669.57Show/hide
Query:  TVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESNAVEEA
        T+SPNAAL+E+T VLKETA KEEVEEP+PPAVTPEEK E+EES +VE V +   SE A SNEK EP  EEE  EE+EEEV+ILT D+ EAEEE  AV E 
Subjt:  TVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESNAVEEA

Query:  VKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKT
         KEE+++PDE+SAPEA+AP    AKEEDEKKEAPAEKT
Subjt:  VKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKT

TrEMBL top hitse value%identityAlignment
A0A0A0K197 Uncharacterized protein7.7e-1562.33Show/hide
Query:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEE-EESDKVEVV--EKSS-DSETAASNEKNEPAAEEEEEDEEEVVILTDDDEEAEEE
        MATVE VSPNA L+EDTT +KET TKEEVEE S P  T +E VEE EES KV+ V  EKSS DSE    NEK E  AEEEEE E+EVVILTDDDE  E E
Subjt:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEE-EESDKVEVV--EKSS-DSETAASNEKNEPAAEEEEEDEEEVVILTDDDEEAEEE

Query:  SN-AVEEAVKEENNNPDETS-APEAEA----PAKEEDEKKEAPAEK
         N    E  KEEN+ PDE+S  PEA+A     A+EEDEKK+  AE+
Subjt:  SN-AVEEAVKEENNNPDETS-APEAEA----PAKEEDEKKEAPAEK

A0A1S3C185 glutamic acid-rich protein-like1.2e-1562.25Show/hide
Query:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEE-EESDKVEVV-EKSSD--SETAASNEKNEPAA---EEEEEDEEEVVILTDDDEEA
        MATVETVSPNA L+EDTT++KET  KEEVEE S P +T +EKVEE EES KVEVV E+SSD  SE   SNEK E  A   EEEEE+E+EVVILTDDDE  
Subjt:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEE-EESDKVEVV-EKSSD--SETAASNEKNEPAA---EEEEEDEEEVVILTDDDEEA

Query:  EE-ESNAVEEAVKEENNNPDETS-APEAEA----PAKEEDEKKEAPAEKTE
        E  ES       KEEN+ PDE S   EA+A     A+E+DEKKEA  EK E
Subjt:  EE-ESNAVEEAVKEENNNPDETS-APEAEA----PAKEEDEKKEAPAEKTE

A0A5A7UTC3 Glutamic acid-rich protein-like1.8e-1662.91Show/hide
Query:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEE-EESDKVEVV-EKSSD--SETAASNEKNEPAA---EEEEEDEEEVVILTDDDEEA
        MATVETVSPNA L+EDTT++KET  KEEVEE S P +T +EKVEE EES KVEVV E+SSD  SE   SNEK E  A   EEEEE+E+EVVILTDDDE  
Subjt:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEE-EESDKVEVV-EKSSD--SETAASNEKNEPAA---EEEEEDEEEVVILTDDDEEA

Query:  EE-ESNAVEEAVKEENNNPDETS-APEAEA----PAKEEDEKKEAPAEKTE
        E  ES    E  KEEN+ PDE S   EA+A     A+E+DEKKEA  EK E
Subjt:  EE-ESNAVEEAVKEENNNPDETS-APEAEA----PAKEEDEKKEAPAEKTE

A0A6J1EXC5 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like7.7e-0748.25Show/hide
Query:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEEEEDEEEVVILTDDDEEAEE-ESNA
        MA VE V P  AL E+  ++ E             A  PEEK EEEES +VEV  K                 EEEEE+EEEVVIL+D++  AEE ES +
Subjt:  MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEEEEDEEEVVILTDDDEEAEE-ESNA

Query:  VEEAVKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKTE
        + E  KEEN+  DE SAPEAEAP     KEEDEKKE   EKTE
Subjt:  VEEAVKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKTE

A0A6J1HYF7 glutamic acid-rich protein-like1.0e-2265Show/hide
Query:  ETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESNAVEE
        +T+SPNAAL+E+T VLKETA KEEVEEP+ PAVTPEEK E+EES +VE V +   S+    NEK E   EEE  EE+EEEVVILT D+ EAEEE  AV E
Subjt:  ETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEE--EEDEEEVVILTDDDEEAEEESNAVEE

Query:  AVKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKTE
          KEE+++P+E+SAPEA+ P    AKEEDEKKEAPAEKTE
Subjt:  AVKEENNNPDETSAPEAEAP----AKEEDEKKEAPAEKTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCGTTGAGACTGTATCTCCAAATGCCGCTCTAGTAGAAGACACAACGGTTCTTAAAGAGACGGCCACAAAAGAAGAAGTTGAGGAACCATCGCCACCAGCCGT
CACACCGGAAGAGAAGGTGGAGGAAGAAGAGAGTGATAAAGTCGAAGTCGTTGAAAAATCGTCCGATTCAGAAACCGCTGCTTCAAATGAAAAAAATGAACCAGCGGCCG
AAGAGGAAGAGGAGGATGAAGAAGAGGTTGTGATCCTAACGGACGACGACGAAGAGGCCGAGGAAGAATCTAACGCAGTTGAAGAGGCAGTCAAGGAAGAAAACAACAAT
CCTGATGAAACATCAGCACCGGAAGCCGAAGCTCCGGCGAAGGAAGAAGATGAGAAGAAGGAAGCCCCGGCGGAGAAGACAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTCTGTCTTTTCCCTTAGCTTCTTCTCCTTTCTTAAGCACTTCTTCATATTCCCTAAGAAGCATTTCCATGGCTACCGTTGAGACTGTATCTCCAAATGCCGCTCTA
GTAGAAGACACAACGGTTCTTAAAGAGACGGCCACAAAAGAAGAAGTTGAGGAACCATCGCCACCAGCCGTCACACCGGAAGAGAAGGTGGAGGAAGAAGAGAGTGATAA
AGTCGAAGTCGTTGAAAAATCGTCCGATTCAGAAACCGCTGCTTCAAATGAAAAAAATGAACCAGCGGCCGAAGAGGAAGAGGAGGATGAAGAAGAGGTTGTGATCCTAA
CGGACGACGACGAAGAGGCCGAGGAAGAATCTAACGCAGTTGAAGAGGCAGTCAAGGAAGAAAACAACAATCCTGATGAAACATCAGCACCGGAAGCCGAAGCTCCGGCG
AAGGAAGAAGATGAGAAGAAGGAAGCCCCGGCGGAGAAGACAGAGTAAGGAAATATATGTGGGATAGTATGCATGGGGATGGAATTTAATTTGTGGG
Protein sequenceShow/hide protein sequence
MATVETVSPNAALVEDTTVLKETATKEEVEEPSPPAVTPEEKVEEEESDKVEVVEKSSDSETAASNEKNEPAAEEEEEDEEEVVILTDDDEEAEEESNAVEEAVKEENNN
PDETSAPEAEAPAKEEDEKKEAPAEKTE