; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G013820 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013820
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:22382090..22385299
RNA-Seq ExpressionLsi11G013820
SyntenyLsi11G013820
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645721.1 hypothetical protein Csa_020383 [Cucumis sativus]2.6e-1255.29Show/hide
Query:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMA-EDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
        MNSKA I LGLLFA  +L     EVTAV A  D+K  EA  +TDE++DVK H  GG  D  LA+C H C+ GCC C  G CV+CC
Subjt:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMA-EDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
XP_004144531.1 glycine-rich protein [Cucumis sativus]2.2e-1963.1Show/hide
Query:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
        M+SK+ I LGLLFAV +    S E   V A D K KEA MET EVD+V+RH +GG H R LAECLHGCN GCC C RGRC+RCC
Subjt:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
XP_038888333.1 glycine-rich protein-like isoform X1 [Benincasa hispida]5.1e-2476.19Show/hide
Query:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
        M+SKA IFLGLLFA+ V+L  SEEVT VMA DVKF+EA+MET EVDDV+RHGFGG H R LAECLHGCN GCC C RGRC+RCC
Subjt:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
XP_038888334.1 glycine-rich protein-like isoform X2 [Benincasa hispida]1.6e-2276.19Show/hide
Query:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
        M+SKA IFLGLLFA+ V+L  SEEVT VMA DVKF EA+MET EVDDV+RHGFGG H R LAECLHGCN GCC C RGRC+RCC
Subjt:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
TrEMBL top hitse value%identityAlignment
A0A0A0K5A1 Uncharacterized protein1.1e-1963.1Show/hide
Query:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
        M+SK+ I LGLLFAV +    S E   V A D K KEA MET EVD+V+RH +GG H R LAECLHGCN GCC C RGRC+RCC
Subjt:  MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAAAGGCTTTGATCTTCCTCGGTCTTCTTTTCGCCGTCACCGTCCTCCTGGTCCCGTCAGAGGAGGTAACCGCGGTTATGGCGGAGGACGTGAAATTCAAAGA
AGCTATTATGGAAACCGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAACACACGATAGAATCCTTGCCGAATGCCTCCATGGTTGCAACACCGGTTGTTGTG
GCTGCGTCCGCGGCCGTTGTGTCAGGTGCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ACACAATCCACCAAGTACTTGACATTGGATTAGAATCCTTATCTCCAACCCCTACCTTTCTTTTGTCATCCTACTATAAATACATTTGAAATCCTGCAAAACTAATTTTC
ATCCCATGATCTCCAAATACTTTCTAATATCCTAATCTACAAAGAAAATGAATTCAAAGGCTTTGATCTTCCTCGGTCTTCTTTTCGCCGTCACCGTCCTCCTGGTCCCG
TCAGAGGAGGTAACCGCGGTTATGGCGGAGGACGTGAAATTCAAAGAAGCTATTATGGAAACCGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAACACACGA
TAGAATCCTTGCCGAATGCCTCCATGGTTGCAACACCGGTTGTTGTGGCTGCGTCCGCGGCCGTTGTGTCAGGTGCTGCTAGATTTTCTGGTGAGGCCGTCGTTGATGTA
GAGGCCTCAAGCTAAGCCTAACAACTAAACGTATTTTGTTGCTTCAAATAATGGCTTTGATTTCTCAAGTTGATAAATGATATACACATATATGTATGTTTGTAGTTGAG
TGGTCTTAAGTAATAAATAAATGCTTTCTAAAATAATAATAATAAAGAATAAATGCATAGGCTTGAGATTAATTGGGTGTATTTAAAGCTTTATTATATAAGTTAACAGA
TAAATTAAAAGAAAGCAATAAAAATGGAATCACAAAAATTAACGTGAAAAAATTTCAAATTGGAGATAAGAAAAAACAAATTATTACAATAACACAGAATAATTCTCTCT
ACTGATCTCAATTACAAGAGCACTCACACCCTTTAACCTCACTTTCAAATAAGAAAATACAAAAGGGAAAATTTAACTAGAGTTAGCACACTTAAGTTTAAAGTGTTTCT
AACCTAGAACAATTTGAAACCAAAGGCATAGGTTCCTTTTATAATACTTGGAGTCCATCAATTTCTTGAACGTTTCCAATGTGAGATAACTGCAGTTCTAATATTTTGTC
AAAACCCAACATGTTTTTCATACAACCTTATGAGTACTATTAGAATCATGGGGATGATCACGTAATTATAGGGGGTCTTTGGGCCACTAAATTGAGTTATGAAATCTATA
ATTAATTGGAATTAGGGAGTTTGTGTTTGGGGTACAGAGTTGTTTAGTTGACTTCCTCGATAAATGTGCAAAAGAGAGAAAGTGAAGAAAAATTGAGTTTCTCGATGAAT
GTGCAAATATTAATATGAACACTGTTGAAATTGATGGAGTTGAGTTATTTATACCAAGGAACGAGTTGGGAAAGGAGTTATAGTGAAGAAATGCAAATTAATTAATACTT
CGAATGGTGTGTTAGATTCTGTCCCAAAAGGAAATCTCAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGCACAGCCCCAAGCAAAATTCAAATAAAAGCTTTCTGAT
GCATTAGTACATAAGGGGTATTAGTTAATCTCTTCTAGCTAGCTTGAGATTAATTGTGTAGTTGAAGCTTCTAATCGTGTAGTTGAAGCTTTATTTGTAATTAACAAGTA
TTGTTCTTTCTTACTTTCTTTTCGTTTCTTCTTTTTTAAGTACAACAATGTGAGTTGAAAGATTCGAACTTTGAACCTCTAATAGCAAACGCATTACAATTATCTAAGAA
CCAAGGGTTAAGGACAATAACCTTTTTCCCTTTCCAATATTATTATTGTATGAGATAATAATTGTTCAAAAGAAATTATAGCCTAATTAACAAAATTTTCTAGTTCAAAA
TTTCAAGAAAATGAATATACAGAACCCTACTATTTCCTCAGGAGGGTAATATGAGCACCACATAAAATAGGGCTCTCCTGAAACCATAACCAAACAACAGTAGAATAAGC
TAAACTGTAACCATTTTTCTTCCTGTATTATATCCTCTCAATAAATAAATTTAATCAAAAGGAAAAAAATTGCTGAGTTTGCTTTTGTGGGGAGGTCTCTCTCTATATTA
AGAATTTGCACTTTTAATGGCTGAGGATTCTTCCTGAGACTCTTCCTCATTTTGAACTGAAGCAGTGTCCTCCATTGCCAAAGCACAAGTTTGGTTAGCCAAGGACAACT
CGGTCCCATCCACAGACATTTCTGTGTTTGCATCTGAAACGTTACCGTCGTTCAGGTTTAACAGCTCAGACTCCTCAGCTTGTTGCAGCAGGCTCCAGTACATGATGCTT
GCGCTCAGTATAAGGATCATCTTTTGGTTCACCTGTCAAAAGTTGTCATGGCAGAACAAGAATTCAATTGGAGTTTAAATGCTAACACTTACAATCAGCAATTTTTGTAA
AGATTAGGCAAATCTACAGGAGGAAATATAAATAATCAAGTTAAGCAACTTACTTCAATAATATCTTCAGGTAGCAAGAAAAGGGAGCAGCCGAGCTTTCGGGCGACACT
AATAATATATGTTGCATTCAGCTTCTTGTCTTCCTCTGCAACTCGACAATTTTACACGCCCAATTCACCACCCTTGGCTCCACAGAACTAAGAAGCTCGAGGAAGAAGAT
TCCATTTGCAAGGTTCTTATCCTGAAACCAGAAGTTATATCATCCTGGTGAAACAATCGAATATAGAACTTCGACGTAAAAACACAAACATTCTTCAATTATTTACCTTG
AAGCCCTCCATTTGGGAGGTTCTACCGGCTTTCTTCACTTTGTTGTTTGCCCAGTTCAGGATATCAGCATCTGTAATCTCTTTGCCCTCTTTACCTTGAGAGTGTGATCT
CAGGTTTCTCAACAGTTGAAGCATGGTAAACCTCATCAGTTGCCATAGAAATGCTGCTCAATGAGAAGGTAATTGTCTTTAGATGTTTGGTCTTATAATTTCTACCTCTA
CTTTGAGGATCTCTAAGTCTCTTCTATTACTTCATAGTATATAAACAAGTGCATATGTATAAGCAAACTTCCTTTGCTAAAGGAACCAAATCATTCTCATTCTTTTTCTG
AATATATTTAGCT
Protein sequenceShow/hide protein sequence
MNSKALIFLGLLFAVTVLLVPSEEVTAVMAEDVKFKEAIMETDEVDDVKRHGFGGTHDRILAECLHGCNTGCCGCVRGRCVRCC