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Lsi11G013830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlycine-rich protein
Genome locationchr11:22392699..22396890
RNA-Seq ExpressionLsi11G013830
SyntenyLsi11G013830
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589124.1 hypothetical protein SDJN03_17689, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1660Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
        M+SK FI LGLLFA+V+LLSSEEA    +  K V EEA+METNGDG+ED KRRF  GHHGH HHH HH    HH   GCS     A E V+ +PQ KP N
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
XP_022930749.1 glycine-rich protein DC7.1-like [Cucurbita moschata]7.0e-1660Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
        M+SK FI LGLLF IV+LLSSEEA    +  K V EEA+METNGDG+ED KRRF  GHHGH HHH HH    HH   GCS     A E V+ +PQ KP N
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
XP_022989495.1 glycine-rich protein DC7.1-like [Cucurbita maxima]4.1e-1659Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
        M+SK FI LGLLFA+V+LLSSEEA    +  K V EEA+METNGDG+ED KRRF  GHHGH HHH        HHH  C   CS A E V+ +PQ KP N
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
XP_023529828.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]9.2e-1659Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
        M+SK FI LGLLFA+V+LLSSEEA    +  K V EE +METNGDG+ED KRRF  GHHGH HHH HH    HH   GCS     A E V+ +PQ KP N
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
XP_038888674.1 glycine-rich protein-like [Benincasa hispida]4.7e-2876.6Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEP
        MSSK FIFLG LF +VVLLSSEE   +    K V E+AMMETNG G EDVKRRFRRGH  HGH HCHHGCCGHHH GGCSRCCSFAGEAVD EP
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEP
TrEMBL top hitse value%identityAlignment
A0A6J1C3E0 glycine-rich protein DC7.1-like6.2e-1056.31Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFA--GEAVD-GEPQVK
        MSSK  IFLGLLFA+VVLLSSEE     +  K V EE M ETN +G+ED K    RGHHGH HHH     C HHH       CSFA   EAVD  E Q K
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFA--GEAVD-GEPQVK

Query:  PYN
        P N
Subjt:  PYN
A0A6J1C3T3 glycine-rich protein 3 short isoform-like4.2e-1447.01Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVK-RRFRRGH------------------HGHGHH---------------HC
        M+SK FI LGLLFA+VVLLSS+       T++ +  E +MET  DGVED K R + RGH                   GHG H               HC
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVK-RRFRRGH------------------HGHGHH---------------HC

Query:  HHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
        HHGCCG  +HG C RCCS+AGEAVD EPQ KP+N
Subjt:  HHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
A0A6J1ESD5 glycine-rich protein DC7.1-like3.4e-1660Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
        M+SK FI LGLLF IV+LLSSEEA    +  K V EEA+METNGDG+ED KRRF  GHHGH HHH HH    HH   GCS     A E V+ +PQ KP N
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
A0A6J1JMI7 glycine-rich protein DC7.1-like2.0e-1659Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
        M+SK FI LGLLFA+V+LLSSEEA    +  K V EEA+METNGDG+ED KRRF  GHHGH HHH        HHH  C   CS A E V+ +PQ KP N
Subjt:  MSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN
Q9MBF4 Glycine-rich protein2.8e-1041.41Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSE-EARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHH---------------------------GHGHHHCHHGCCG
        M SK+F+ LGLL AI +L+SSE  AR L +TS    E+A   T    +ED +  + RG                             GHG  HC +GCCG
Subjt:  MSSKVFIFLGLLFAIVVLLSSE-EARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHH---------------------------GHGHHHCHHGCCG

Query:  HHHHGGCSRCCSFAGEAVDGEPQVKPYN
        H +HGGC RCC++AGEAVD EP+ +P N
Subjt:  HHHHGGCSRCCSFAGEAVDGEPQVKPYN
SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein1.7e-0436.21Show/hide
Query:  MSSKVFIFLGLLFAIVVLLSSE-EARPLLKTSKVVIEEAMMETNGDGVEDVKRR---------------FRRGHHGHGHHHCHHGCCGHHHHGGCSRCCS
        M SK F+FLGL  A   L+SSE  A  L +TS        M+ +G+   DV  R                 RG  G+    C +GCC    + GC RCCS
Subjt:  MSSKVFIFLGLLFAIVVLLSSE-EARPLLKTSKVVIEEAMMETNGDGVEDVKRR---------------FRRGHHGHGHHHCHHGCCGHHHHGGCSRCCS

Query:  FAGEAVDGEPQVKPYN
        +AGEA+D   + +P+N
Subjt:  FAGEAVDGEPQVKPYN
Arabidopsis top hitse value%identityAlignment
AT2G05530.1 Glycine-rich protein family8.6e-0453.66Show/hide
Query:  FRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEP
        +  G HG  H +C +GCC   +H GCSRCCS+AGEAV  +P
Subjt:  FRRGHHGHGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGTTGATGGTGTTGAGCACCATGGTTTTGGAGGAGGCCATGCTCGAAAGCTTGCCCAATGCGTCCACGGTTGTGCTCGAGGTTGTTGTGAATGCTTCCGCAGC
CGTTGCATCAGGTGCTGCGGCTAGGTGTGAATGGTTTAAAATGAGTTCCAAAGTTTTCATCTTCCTCGGTCTCCTTTTCGCGATCGTCGTCCTCCTCTCCTCAGAGGAGG
CACGACCATTGCTAAAGACCTCAAAAGTGGTGATTGAAGAAGCCATGATGGAGACCAATGGAGACGGAGTCGAGGACGTCAAGCGTCGTTTCCGCAGGGGCCACCATGGG
CATGGGCACCACCACTGTCACCACGGTTGCTGCGGTCACCACCACCATGGCGGTTGCAGTAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGGAGAACCCCAAGTCAA
GCCTTACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGTTGATGGTGTTGAGCACCATGGTTTTGGAGGAGGCCATGCTCGAAAGCTTGCCCAATGCGTCCACGGTTGTGCTCGAGGTTGTTGTGAATGCTTCCGCAGC
CGTTGCATCAGGTGCTGCGGCTAGGTGTGAATGGTTTAAAATGAGTTCCAAAGTTTTCATCTTCCTCGGTCTCCTTTTCGCGATCGTCGTCCTCCTCTCCTCAGAGGAGG
CACGACCATTGCTAAAGACCTCAAAAGTGGTGATTGAAGAAGCCATGATGGAGACCAATGGAGACGGAGTCGAGGACGTCAAGCGTCGTTTCCGCAGGGGCCACCATGGG
CATGGGCACCACCACTGTCACCACGGTTGCTGCGGTCACCACCACCATGGCGGTTGCAGTAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGGAGAACCCCAAGTCAA
GCCTTACAACTGAAAAACACTGTTTGCATCAAATAAAGGCTTTATGAAGTTTGATGTGTTATTGTAGTTAATTTGTATTATGTTATGAATAAGTGCATCGGATTTCACCC
ATTTAGACTTGCCCATGTACTAGGAAATTAGTTAATCACATCCTTTGAGGTTAATTAATTGATTGTGTGTGTGTATATGTGAGGCTTTAATATAAAAACTAATGAATCAC
ATTATCATGTGAAATGTTATTCTTATTAAACTTTTTTGTCAATAAGATCCTCATTGTTATTAA
Protein sequenceShow/hide protein sequence
MVKLMVLSTMVLEEAMLESLPNASTVVLEVVVNASAAVASGAAARCEWFKMSSKVFIFLGLLFAIVVLLSSEEARPLLKTSKVVIEEAMMETNGDGVEDVKRRFRRGHHG
HGHHHCHHGCCGHHHHGGCSRCCSFAGEAVDGEPQVKPYN