; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G013850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationchr11:22414773..22415186
RNA-Seq ExpressionLsi11G013850
SyntenyLsi11G013850
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8524786.1 hypothetical protein F0562_011209 [Nyssa sinensis]7.3e-4467.88Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD TTIV+FVEDEEAFNG I + F RLDTD DGFLSYAE+LKEL +LRV E  FGIDVK + DEL+R+YG++F QFD DSNG VD++EF    K 
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLA+A G+G LP+QMALE+D FL KAV+RE+AK  A
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

XP_004144609.1 uncharacterized protein LOC101208968 [Cucumis sativus]9.1e-6390.51Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDG TIVNFVEDEEAFNGW REHFTRLDTD DGFLSYAEMLKELH LRVSEADFG DVKPD DELS++Y AVF QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

XP_008455505.1 PREDICTED: uncharacterized protein LOC103495656 [Cucumis melo]1.0e-6189.78Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDG TIVNFVEDEEAFNGW REHFTRLDTD DGFLSYAEMLKE +TLRVSEADFG DVK D DELS++YGAVF QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

XP_022135904.1 uncharacterized protein LOC111007741 [Momordica charantia]6.4e-4871.64Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD  TI+NFVEDEEAF  WIRE F  LD D DG LSYAEML+ELH+LRV E  FG+D KPD DELSR+YGAVF QFDR+SNG+VD++EFM G K 
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAK
        +M+AIAEGMGFLP+QMALE+DGFLMKAV+ E ++
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAK

XP_038887184.1 uncharacterized protein LOC120077371 [Benincasa hispida]5.7e-6591.97Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDG TIVNFVEDEEAFNGW REHF  LDTDGDGFLSYAEMLKELH+LRVSEADFG DVKPD D+LSR+YGAVFGQFDRDSNGKVDVDEFMMGMKN
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

TrEMBL top hitse value%identityAlignment
A0A1S3C0M6 uncharacterized protein LOC1034956564.9e-6289.78Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDG TIVNFVEDEEAFNGW REHFTRLDTD DGFLSYAEMLKE +TLRVSEADFG DVK D DELS++YGAVF QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

A0A5A7UY59 Uncharacterized protein4.9e-6289.78Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDG TIVNFVEDEEAFNGW REHFTRLDTD DGFLSYAEMLKE +TLRVSEADFG DVK D DELS++YGAVF QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

A0A5J5A3Z9 Uncharacterized protein3.5e-4467.88Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD TTIV+FVEDEEAFNG I + F RLDTD DGFLSYAE+LKEL +LRV E  FGIDVK + DEL+R+YG++F QFD DSNG VD++EF    K 
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLA+A G+G LP+QMALE+D FL KAV+RE+AK  A
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

A0A5J5A5Q8 Uncharacterized protein2.3e-4367.15Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD TTIV+FVEDEEAFNG I + F RLDTD DGFLSYAE+LKEL +LRV E  FGIDVK + DEL+R+Y ++F QFD DSNG VD++EF    K 
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLA+A G+G LP+QMALE+D FL KAV+RE+AK  A
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

A0A6J1C2T1 uncharacterized protein LOC1110077413.1e-4871.64Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD  TI+NFVEDEEAF  WIRE F  LD D DG LSYAEML+ELH+LRV E  FG+D KPD DELSR+YGAVF QFDR+SNG+VD++EFM G K 
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAK
        +M+AIAEGMGFLP+QMALE+DGFLMKAV+ E ++
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein5.6e-1029.69Show/hide
Query:  LLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLA
        ++   T++ F+ D ++F     ++F  LD D +G LS +E+ + L+ +   E+    +V P  DE   +Y A+F +F  D   K     F   +  ++ A
Subjt:  LLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLA

Query:  IAEGMGFLPIQMALEKDGFLMKAVQREA
        +A G+G  P+ M +  DG +MKAV  E+
Subjt:  IAEGMGFLPIQMALEKDGFLMKAVQREA

AT2G44310.1 Calcium-binding EF-hand family protein7.8e-2844.85Show/hide
Query:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN
        M V L+DG+T+ +FV+DEE F   + E F  LD + DG LS +E+ K   ++R+ E+ FG+DV    DEL+ +Y ++F +FD D +G VD++EF   MK 
Subjt:  MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMAL--EKDGFLMKAVQREAAK
        ++LAIA+G+G  PI M L  + D FL KA   EA+K
Subjt:  MMLAIAEGMGFLPIQMAL--EKDGFLMKAVQREAAK

AT4G27790.1 Calcium-binding EF hand family protein1.6e-0431.18Show/hide
Query:  LDGTTIVNFVEDEEAFNG----WI-REHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDE
        LD     NF+  E++ NG    W+ +E  T +DT+GDG L Y E +K  + +    A F    + + DE       +F + DRD +  +  DE
Subjt:  LDGTTIVNFVEDEEAFNG----WI-REHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDE

AT4G32060.1 calcium-binding EF hand family protein6.0e-0428.57Show/hide
Query:  EHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMG
        E F   D D DG +S+ E +  +  L + E+ F +                F  FD D+NG++D +EF   M  M     +G+G
Subjt:  EHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMG

AT4G38810.2 Calcium-binding EF-hand family protein1.6e-0931.09Show/hide
Query:  ELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMML
        ++LDG+ IV  VE+E+ F+ ++ + F +LD D DG LS  E+   +  +    A  G+  +  + +   IY  V  +F   S  KV   EF   + +++L
Subjt:  ELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMML

Query:  AIAEGMGFLPIQMALEKDG
         +A G+   PI + L  DG
Subjt:  AIAEGMGFLPIQMALEKDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAATTACTTGACGGCACCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAATGGTTGGATTAGAGAGCATTTCACTCGCCTCGACACCGACGGCGA
CGGCTTCCTCTCCTACGCTGAGATGTTGAAGGAGTTGCATACGCTAAGAGTCTCCGAAGCCGACTTTGGAATCGATGTAAAACCCGACACCGATGAGCTCTCTCGTATCT
ACGGTGCCGTCTTTGGGCAGTTCGATCGCGACTCGAATGGAAAAGTTGATGTGGATGAGTTCATGATGGGGATGAAGAATATGATGCTTGCTATTGCTGAGGGAATGGGA
TTCTTGCCTATTCAAATGGCCTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAGAGAGAAGCTGCCAAAGCCTTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAATTACTTGACGGCACCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAATGGTTGGATTAGAGAGCATTTCACTCGCCTCGACACCGACGGCGA
CGGCTTCCTCTCCTACGCTGAGATGTTGAAGGAGTTGCATACGCTAAGAGTCTCCGAAGCCGACTTTGGAATCGATGTAAAACCCGACACCGATGAGCTCTCTCGTATCT
ACGGTGCCGTCTTTGGGCAGTTCGATCGCGACTCGAATGGAAAAGTTGATGTGGATGAGTTCATGATGGGGATGAAGAATATGATGCTTGCTATTGCTGAGGGAATGGGA
TTCTTGCCTATTCAAATGGCCTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAGAGAGAAGCTGCCAAAGCCTTTGCTTGA
Protein sequenceShow/hide protein sequence
MSVELLDGTTIVNFVEDEEAFNGWIREHFTRLDTDGDGFLSYAEMLKELHTLRVSEADFGIDVKPDTDELSRIYGAVFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMG
FLPIQMALEKDGFLMKAVQREAAKAFA