; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G013860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlycine rich protein
Genome locationchr11:22427634..22428413
RNA-Seq ExpressionLsi11G013860
SyntenyLsi11G013860
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059138.1 cold and drought-regulated protein CORA-like [Cucumis melo var. makuwa]3.1e-2868.64Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYGL
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KY G YDRGY                 G YGGRGGYGG  GGYG GC YG 
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYGL

Query:  CGYRCCSYVGEVVEGAKP
        CGYRCCSY GEVVEGAKP
Subjt:  CGYRCCSYVGEVVEGAKP

KGN43456.1 hypothetical protein Csa_020456 [Cucumis sativus]2.0e-2766.39Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYG
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC YG
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYG

Query:  LCGYRCCSYVGEVVEGAKP
         CG++CCSY GEVVEGAKP
Subjt:  LCGYRCCSYVGEVVEGAKP

NP_001267708.1 glycine-rich protein-like precursor [Cucumis sativus]2.0e-2766.39Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYG
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC YG
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYG

Query:  LCGYRCCSYVGEVVEGAKP
         CG++CCSY GEVVEGAKP
Subjt:  LCGYRCCSYVGEVVEGAKP

XP_008455506.1 PREDICTED: cold and drought-regulated protein CORA-like [Cucumis melo]1.6e-2767.8Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYGL
        MSSK FVF+GLLLAFVL LS EV AR +AET  K DN+ATVETNGVED KY G YDRGY                 G YGGRGGYGG  GGYG GC YG 
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYGL

Query:  CGYRCCSYVGEVVEGAKP
        CGYRCCSY GEVVEGAKP
Subjt:  CGYRCCSYVGEVVEGAKP

XP_022952571.1 glycine-rich protein-like isoform X2 [Cucurbita moschata]9.1e-2870.37Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGY---GDYGGRGGYG-----GPGGGYGGGCWYGLCGYRCCSYVG
        MSSK F+F+GLL A VL +S EV AR +AETS KK+N+AT ETNGVED KYG YD GY   G YGGRGGYG     G GGGYG GC YG CGYRCCSY G
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGY---GDYGGRGGYG-----GPGGGYGGGCWYGLCGYRCCSYVG

Query:  EVVEGAKP
        EVVEGAKP
Subjt:  EVVEGAKP

TrEMBL top hitse value%identityAlignment
A0A0A0K6L7 Uncharacterized protein9.8e-2866.39Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYG
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC YG
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYG

Query:  LCGYRCCSYVGEVVEGAKP
         CG++CCSY GEVVEGAKP
Subjt:  LCGYRCCSYVGEVVEGAKP

A0A1S3C180 cold and drought-regulated protein CORA-like7.5e-2867.8Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYGL
        MSSK FVF+GLLLAFVL LS EV AR +AET  K DN+ATVETNGVED KY G YDRGY                 G YGGRGGYGG  GGYG GC YG 
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYGL

Query:  CGYRCCSYVGEVVEGAKP
        CGYRCCSY GEVVEGAKP
Subjt:  CGYRCCSYVGEVVEGAKP

A0A5D3DE59 Cold and drought-regulated protein CORA-like1.5e-2868.64Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYGL
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KY G YDRGY                 G YGGRGGYGG  GGYG GC YG 
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYGL

Query:  CGYRCCSYVGEVVEGAKP
        CGYRCCSY GEVVEGAKP
Subjt:  CGYRCCSYVGEVVEGAKP

A0A6J1GKL6 glycine-rich protein-like isoform X24.4e-2870.37Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGY---GDYGGRGGYG-----GPGGGYGGGCWYGLCGYRCCSYVG
        MSSK F+F+GLL A VL +S EV AR +AETS KK+N+AT ETNGVED KYG YD GY   G YGGRGGYG     G GGGYG GC YG CGYRCCSY G
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGY---GDYGGRGGYG-----GPGGGYGGGCWYGLCGYRCCSYVG

Query:  EVVEGAKP
        EVVEGAKP
Subjt:  EVVEGAKP

A0P8W6 Cell wall glycine-rich protein9.8e-2866.39Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYG
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC YG
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGCWYG

Query:  LCGYRCCSYVGEVVEGAKP
         CG++CCSY GEVVEGAKP
Subjt:  LCGYRCCSYVGEVVEGAKP

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein9.2e-0747.27Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETS--FKKDNKATVETNGVE-DGKYGEYDRGYGDYGGRGGYGGPGGGYGG-----GCWYGLC--GY----R
        M SK F+F+GL LAF   +S EVVA  +AETS   K D +     NGV+ DG+      GY D GG G YGG  G  GG     GC YG C  GY    R
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETS--FKKDNKATVETNGVE-DGKYGEYDRGYGDYGGRGGYGGPGGGYGG-----GCWYGLC--GY----R

Query:  CCSYVGEVVE
        CCSY GE ++
Subjt:  CCSYVGEVVE

Arabidopsis top hitse value%identityAlignment
AT2G05540.1 Glycine-rich protein family4.7e-0638.58Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDN------KATVETNGVEDGKYGEY---------DRGYGDYGG-----RGGYGGPGGGY----GG
        M+SK  +F+ L++  VL ++ EVVAR +AE S ++ N      K T +  G   G YG +           GYG+ GG      GGYG  GGGY    GG
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDN------KATVETNGVEDGKYGEY---------DRGYGDYGG-----RGGYGGPGGGY----GG

Query:  GCWYGLC--GY-----RCCSYVGEVVE
         C YG C  GY     RCC+Y G+ V+
Subjt:  GCWYGLC--GY-----RCCSYVGEVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAAACTTTTGTTTTCGTCGGTCTTCTTCTCGCCTTTGTTCTCTTCCTCTCTTTGGAGGTGGTCGCGAGAGGCGTCGCAGAAACCTCCTTCAAGAAAGACAA
TAAGGCCACGGTAGAGACCAATGGCGTAGAGGATGGCAAGTATGGGGAGTACGATAGAGGCTATGGTGATTACGGTGGCCGCGGCGGCTACGGTGGCCCCGGTGGTGGAT
ATGGAGGGGGTTGCTGGTATGGTTTGTGCGGGTACAGGTGCTGCAGCTACGTTGGTGAAGTGGTAGAGGGTGCAAAACCCTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAATTCAACCTCTTACTAATCACAAAAATGAGTTCCAAAACTTTTGTTTTCGTCGGTCTTCTTCTCGCCTTTGTTCTCTTCCTCTCTTTGGAGGTGGTCGCGAGAGG
CGTCGCAGAAACCTCCTTCAAGAAAGACAATAAGGCCACGGTAGAGACCAATGGCGTAGAGGATGGCAAGTATGGGGAGTACGATAGAGGCTATGGTGATTACGGTGGCC
GCGGCGGCTACGGTGGCCCCGGTGGTGGATATGGAGGGGGTTGCTGGTATGGTTTGTGCGGGTACAGGTGCTGCAGCTACGTTGGTGAAGTGGTAGAGGGTGCAAAACCC
TAAGACAAGATGTGGAATGGGGTGAAATAATAAAATAGTTTGAAGTTTATGTGTAATGTGTGAAATGTGAAGATTGAGAAATAAATGCATGGGGAATGGAGTGGCTAGCT
TCTAGTTTTTCTTTTTCCCTATGTTTGGGCTTTAGTATGTTGCTATAGATTTGCTTTTGCAAATTTGTATAATATCAACAAAGATAATTTCCGCTTTTGTGTAA
Protein sequenceShow/hide protein sequence
MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGYGDYGGRGGYGGPGGGYGGGCWYGLCGYRCCSYVGEVVEGAKP