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Lsi11G013870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationchr11:22436606..22437025
RNA-Seq ExpressionLsi11G013870
SyntenyLsi11G013870
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645727.1 hypothetical protein Csa_020381 [Cucumis sativus]9.6e-6090.7Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLRVLETHFGIDTKPDP ELSSVYGSLFLQFD+DCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVD
        MMLAMANGIG SPVQMLLEEN   K +V+
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVD

XP_004144527.1 uncharacterized protein LOC101208564 [Cucumis sativus]5.3e-6694.81Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLRVLETHFGIDTKPDP ELSSVYGSLFLQFD+DCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

XP_008455503.1 PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]1.5e-6594.81Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRV ETHFGIDTKPDP ELSSVY SLFLQFD+DCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

XP_022952569.1 uncharacterized protein LOC111455222 [Cucurbita moschata]9.9e-5785.19Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRVLETHFG+D KPDPEELSSVY SLF QFD+DCNGKVDLGEFM ET+K
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPV+M+LEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

XP_038888629.1 uncharacterized protein LOC120078427 [Benincasa hispida]2.4e-6393.33Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFS  IRERFSHLD+DRDGVLCYGEMLKELQSLRVLETHFGIDTKPDP+ELSSVYGSLF QFD+DCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein2.5e-6694.81Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLRVLETHFGIDTKPDP ELSSVYGSLFLQFD+DCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

A0A1S3C1T0 uncharacterized protein LOC1034956557.4e-6694.81Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRV ETHFGIDTKPDP ELSSVY SLFLQFD+DCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

A0A5D3DDG8 Calcium-binding EF-hand family protein7.4e-6694.81Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRV ETHFGIDTKPDP ELSSVY SLFLQFD+DCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

A0A6J1EXF9 uncharacterized protein LOC1114370616.3e-5782.96Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVED+E F   +RERFSHLD+D DGVL Y EML+ELQSLRV ETHFGID KPDP+ELSSVYGSLFLQFD+DC+GKVD+GEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MM+AMANGIG SPVQM+LEENSFLKKAV+REST +
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

A0A6J1GM29 uncharacterized protein LOC1114552224.8e-5785.19Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRVLETHFG+D KPDPEELSSVY SLF QFD+DCNGKVDLGEFM ET+K
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPV+M+LEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein5.1e-1128.91Show/hide
Query:  ILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKKMMLA
        ++ S T++ F+ D ++F     + F  LD+D++G+L   E+ + L ++  +E+          +E  +VY ++F +F +D   K     F +   +++ A
Subjt:  ILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKKMMLA

Query:  MANGIGCSPVQMLLEENSFLKKAVDRES
        MA GIG SPV M++  +  + KAV  ES
Subjt:  MANGIGCSPVQMLLEENSFLKKAVDRES

AT2G44310.1 Calcium-binding EF-hand family protein4.5e-3145.26Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK
        M V ++D +T+ +FV+DEE F   + ERF+ LD+++DGVL   E+ K  +S+R+LE+HFG+D     +EL+++Y S+F +FD D +G VDL EF  E KK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLL--EENSFLKKAVDRESTNL
        ++LA+A+G+G  P+ M+L  ++++FLKKA D E++ L
Subjt:  MMLAMANGIGCSPVQMLL--EENSFLKKAVDRESTNL

AT4G38810.2 Calcium-binding EF-hand family protein4.8e-0927.2Show/hide
Query:  EILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKKMML
        ++LD + IV  VE+E+ F  ++ ++F  LD D DG L   E+   +  +          T PD +    +Y  +  +F      KV   EF E    ++L
Subjt:  EILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKKMML

Query:  AMANGIGCSPVQMLLEENSFLKKAV
         MA G+   P+ +L  +   L + V
Subjt:  AMANGIGCSPVQMLLEENSFLKKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAAATCTTGGACAGTGCAACAATTGTGAATTTTGTGGAAGATGAAGAAGCTTTTAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGATAGAGA
TGGAGTTCTTTGTTATGGAGAGATGTTAAAGGAGTTGCAAAGTCTTAGAGTGTTGGAGACTCATTTCGGGATCGATACGAAACCCGACCCCGAAGAGCTTTCTTCCGTCT
ATGGCTCCTTGTTCTTGCAGTTCGATCAAGATTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAAGAAACCAAGAAGATGATGCTGGCCATGGCCAATGGAATTGGC
TGTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGTTTCTTGAAGAAAGCTGTGGATAGAGAGTCCACAAACTTGCTGCAGCTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAAATCTTGGACAGTGCAACAATTGTGAATTTTGTGGAAGATGAAGAAGCTTTTAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGATAGAGA
TGGAGTTCTTTGTTATGGAGAGATGTTAAAGGAGTTGCAAAGTCTTAGAGTGTTGGAGACTCATTTCGGGATCGATACGAAACCCGACCCCGAAGAGCTTTCTTCCGTCT
ATGGCTCCTTGTTCTTGCAGTTCGATCAAGATTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAAGAAACCAAGAAGATGATGCTGGCCATGGCCAATGGAATTGGC
TGTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGTTTCTTGAAGAAAGCTGTGGATAGAGAGTCCACAAACTTGCTGCAGCTTAATTAA
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDQDCNGKVDLGEFMEETKKMMLAMANGIG
CSPVQMLLEENSFLKKAVDRESTNLLQLN