; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G013880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationchr11:22450902..22451315
RNA-Seq ExpressionLsi11G013880
SyntenyLsi11G013880
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645727.1 hypothetical protein Csa_020381 [Cucumis sativus]2.1e-5989.05Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILDGTTIVNFVEDEAAF+AYIR +F HLDT+HDGLLSYNE+L+ELQSLRVF+ DFG DEK  PDELSSVYSSLFLQFDRDSDG+VDLD YKTE KR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_008455501.1 PREDICTED: uncharacterized protein LOC103495653 [Cucumis melo]1.7e-6191.24Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILD TTIVNFVEDEAAF+AYIRDRF HLDTNHDGLLSYNE+L+ELQSLRVFE DFG D+K DPDELSSVYSSLFLQFDRDSDG+VDLD YKTE KR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_011658679.1 uncharacterized protein LOC105436072 [Cucumis sativus]2.1e-5989.05Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILDGTTIVNFVEDEAAF+AYIR +F HLDT+HDGLLSYNE+L+ELQSLRVF+ DFG DEK  PDELSSVYSSLFLQFDRDSDG+VDLD YKTE KR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_022135623.1 uncharacterized protein LOC111007532 [Momordica charantia]3.7e-5684.67Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILD  TIVNFVEDEAAF A+IRDRF HLDTNHDGLLSY E+L+ELQSLRVFE  FG D KPDPDELS+VYSSLFLQFD DS G VDLDE+K ETKR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLA ANG+GFLPVQMVLEEGSFLMKAVERET IMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_038887952.1 uncharacterized protein LOC120077919 [Benincasa hispida]1.2e-6292.7Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILD TTIVNFVEDEAAF+AYIRDRFDHLDTNHDG LSYNE+L+ELQSLRVFETDFG DEK DP+ELSSVYSSLFLQFDRDSDG VDLDE+KTETKR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

TrEMBL top hitse value%identityAlignment
A0A0A0K3B2 Uncharacterized protein1.0e-5989.05Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILDGTTIVNFVEDEAAF+AYIR +F HLDT+HDGLLSYNE+L+ELQSLRVF+ DFG DEK  PDELSSVYSSLFLQFDRDSDG+VDLD YKTE KR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A0A0KHT7 Uncharacterized protein8.9e-5683.21Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILD  TIVNFVED+ AF A+IRDRF HLDTN DGLLSY+E+L+EL +LRVFET FG D KPDPDELSSVYSSLFLQFDRDS G VDLDE++ ETKR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+GFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A1S3C175 uncharacterized protein LOC1034956538.3e-6291.24Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILD TTIVNFVEDEAAF+AYIRDRF HLDTNHDGLLSYNE+L+ELQSLRVFE DFG D+K DPDELSSVYSSLFLQFDRDSDG+VDLD YKTE KR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A5A7UT84 Calcium-binding EF-hand family protein8.3e-6291.24Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILD TTIVNFVEDEAAF+AYIRDRF HLDTNHDGLLSYNE+L+ELQSLRVFE DFG D+K DPDELSSVYSSLFLQFDRDSDG+VDLD YKTE KR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A6J1C5B4 uncharacterized protein LOC1110075321.8e-5684.67Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        MSVEILD  TIVNFVEDEAAF A+IRDRF HLDTNHDGLLSY E+L+ELQSLRVFE  FG D KPDPDELS+VYSSLFLQFD DS G VDLDE+K ETKR
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLA ANG+GFLPVQMVLEEGSFLMKAVERET IMAA
Subjt:  MMLAMANGIGFLPVQMVLEEGSFLMKAVERETAIMAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein2.1e-0929.69Show/hide
Query:  ILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKRMMLA
        ++   T++ F+ D  +F +   D F  LD + +G+LS +EL + L ++   E+     E    DE  +VY+++F +F  D    +    ++     ++ A
Subjt:  ILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKRMMLA

Query:  MANGIGFLPVQMVLEEGSFLMKAVERET
        MA GIG  PV MV+     +MKAV  E+
Subjt:  MANGIGFLPVQMVLEEGSFLMKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein3.0e-2742.96Show/hide
Query:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR
        M V ++DG+T+ +FV+DE  F   + +RF  LD N DG+LS +EL K  +S+R+ E+ FG D     DEL+++Y S+F +FD D  G VDL+E+++E K+
Subjt:  MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKR

Query:  MMLAMANGIGFLPVQMVL--EEGSFLMKAVERETA
        ++LA+A+G+G  P+ MVL  ++ +FL KA + E +
Subjt:  MMLAMANGIGFLPVQMVL--EEGSFLMKAVERETA

AT4G38810.2 Calcium-binding EF-hand family protein2.4e-0828.8Show/hide
Query:  EILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKRMML
        ++LDG+ IV  VE+E  F  ++  +F  LD + DG LS  EL   +  +            PD D    +YS +  +F   S   V   E+K     ++L
Subjt:  EILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKRMML

Query:  AMANGIGFLPVQMVLEEGSFLMKAV
         MA G+   P+ ++  +G  L + V
Subjt:  AMANGIGFLPVQMVLEEGSFLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAAATATTGGACGGTACCACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCGATCACCTCGACACTAACCATGA
TGGTCTCCTTTCCTATAATGAGCTGCTGAAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTTGGAACTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCTGTCT
ATAGTTCTCTGTTTTTGCAATTCGATCGTGACTCGGACGGAATAGTTGATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCCATGGCCAATGGGATTGGT
TTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGAAATATTGGACGGTACCACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCGATCACCTCGACACTAACCATGA
TGGTCTCCTTTCCTATAATGAGCTGCTGAAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTTGGAACTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCTGTCT
ATAGTTCTCTGTTTTTGCAATTCGATCGTGACTCGGACGGAATAGTTGATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCCATGGCCAATGGGATTGGT
TTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA
Protein sequenceShow/hide protein sequence
MSVEILDGTTIVNFVEDEAAFSAYIRDRFDHLDTNHDGLLSYNELLKELQSLRVFETDFGTDEKPDPDELSSVYSSLFLQFDRDSDGIVDLDEYKTETKRMMLAMANGIG
FLPVQMVLEEGSFLMKAVERETAIMAA