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Lsi11G013930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G013930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationchr11:22475432..22477755
RNA-Seq ExpressionLsi11G013930
SyntenyLsi11G013930
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039497.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]1.1e-2587.34Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFAARAIFRSSSGKA TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

TYK15251.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]1.1e-2587.34Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFAARAIFRSSSGKA TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

XP_038887455.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]5.9e-2789.87Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFA RAIFRSSSGKA TLLSVGARAAPARSPFR ASKRPFSQCS+RIPVEMSFCVES++PFHSATSSALM SMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

XP_038887456.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida]5.9e-2789.87Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFA RAIFRSSSGKA TLLSVGARAAPARSPFR ASKRPFSQCS+RIPVEMSFCVES++PFHSATSSALM SMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

XP_038887457.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]5.9e-2789.87Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFA RAIFRSSSGKA TLLSVGARAAPARSPFR ASKRPFSQCS+RIPVEMSFCVES++PFHSATSSALM SMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

TrEMBL top hitse value%identityAlignment
A0A0A0KVK4 Uncharacterized protein7.8e-2582.28Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFAAR+IFRSSS KA TLLS GARAAPA SPFR ASKRPFS CS R+P+E+SFCVES++PFHSATSSALMTSMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

A0A1S3C9E2 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.6e-2586.08Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFAARAIFRSSSGK  TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.6e-2586.08Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFAARAIFRSSSGK  TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 65.4e-2687.34Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFAARAIFRSSSGKA TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 65.4e-2687.34Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        MASFAARAIFRSSSGKA TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLS S
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.1e-0749.35Show/hide
Query:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        AR++ R++S ++    S G  A+ A+S    FR  ++R      LR PVE+SFCVESL+P+HSAT+SALMTS LS S
Subjt:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein2.0e-0943.75Show/hide
Query:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        AAR++FRS++ +A++     S G +  P  AR+ FR   + P +    R PVE+S CVE+++P+H+AT+SAL+ SMLS S
Subjt:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

AT1G28395.2 unknown protein2.0e-0943.75Show/hide
Query:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        AAR++FRS++ +A++     S G +  P  AR+ FR   + P +    R PVE+S CVE+++P+H+AT+SAL+ SMLS S
Subjt:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

AT1G28395.3 unknown protein2.0e-0943.75Show/hide
Query:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        AAR++FRS++ +A++     S G +  P  AR+ FR   + P +    R PVE+S CVE+++P+H+AT+SAL+ SMLS S
Subjt:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

AT2G33847.1 unknown protein1.2e-0946.75Show/hide
Query:  AARAIFRSSSGKA--TTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        AAR++FRS  G+A    L S     + ARS F+   + P S    R PVE+S CVE+++P+H+AT+SAL+ SMLS S
Subjt:  AARAIFRSSSGKA--TTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS

AT2G33847.2 unknown protein1.2e-0946.75Show/hide
Query:  AARAIFRSSSGKA--TTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS
        AAR++FRS  G+A    L S     + ARS F+   + P S    R PVE+S CVE+++P+H+AT+SAL+ SMLS S
Subjt:  AARAIFRSSSGKA--TTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTACAACTCTTTTGAGCGTTGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGCAATGC
TTCTAAACGACCTTTCTCTCAGTGCTCTCTAAGGATTCCGGTTGAAATGAGCTTCTGTGTGGAGTCCTTGATTCCATTCCATTCTGCTACTTCTTCGGCATTAATGACTT
CGATGCTTTCTTGTTCAATGATGATGTGTGATGATGAATGGTCAAGGGGCGGGAAGTTTTGTGTGCAGAGTTCTACATTGTTGACAGTGGCCGCTGCTAAATTTCGCGAA
CTGATTCGCAGGGATTTGGTTTTCCATGTCTTGACTTTTTATGTCTTAGATTCTGAATTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAATCCCCCGTTTTCTGTAGCAGCGGCGGCAGGGTTTTAGCATTTCAATGCCCTAAATCTAAGACGGAACTCCGTTAGTTCATCGTGGCTGATTGCACATAATTTC
TCTCCGAACTCTCAGATTTACCGATGGCTTCCTTCGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTACAACTCTTTTGAGCGTTGGAGCCAGAGCAGCTCCG
GCTCGTTCACCATTTCGCAATGCTTCTAAACGACCTTTCTCTCAGTGCTCTCTAAGGATTCCGGTTGAAATGAGCTTCTGTGTGGAGTCCTTGATTCCATTCCATTCTGC
TACTTCTTCGGCATTAATGACTTCGATGCTTTCTTGTTCAATGATGATGTGTGATGATGAATGGTCAAGGGGCGGGAAGTTTTGTGTGCAGAGTTCTACATTGTTGACAG
TGGCCGCTGCTAAATTTCGCGAACTGATTCGCAGGGATTTGGTTTTCCATGTCTTGACTTTTTATGTCTTAGATTCTGAATTTGTGTAACTATAGACTACTAGAATGTAT
AGGAAGAGATTCACTGTAGACAGACATTTGAGTTTTGAATAGGAAGGCTTCAAGAAATTGAGTTCATGGAGTCATTATATTGAATTCCTTATAGGATTTTCTTGTAATAA
GAGGAAGGGTTCTTTTTCTAGTAGTCTTTCTATATCTTGTATGTTTACTCTATGTCTATCATTACTCAGGCTATGAACGTACTTCATAGTTCTGATGGATGCTTGTGTTT
TATGACTACGAAATTTGTTAGATTACTGACTATATGAACTCGAAAAGATTTATTAAATACAAAGCCTTTTAATAGATGTATTGCACAATGTTAACACCATTTAATATCTA
TTTGGCAGTGACTGGCTTGCAAACTTCATGATATATGATGATTGGAAAAAGTTTGGCCACCTGGGTAACATATTCACCCATGTAATCTTCGACTGCAACCTGGGTTTAAG
CCGGACATGGCTATCTTATATTTTGAATTTAATTTCCTCAAGCATATGGTTGATATTCTCCAAGGAAACATAAGTAACAACCATTTTTCCCCTCCATATTCTCCAACTTA
TTCTCTAGTAAATGACGAAATACTAGGATTGCCTTGTTCTGGTTTATAATGCTTACGATATGGTTTATTTAGGTTAGAACATTGACCAATGCATTGGCTCGATTTTTCTT
TTTCC
Protein sequenceShow/hide protein sequence
MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSCSMMMCDDEWSRGGKFCVQSSTLLTVAAAKFRE
LIRRDLVFHVLTFYVLDSEFV