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Lsi11G014290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:22837972..22838632
RNA-Seq ExpressionLsi11G014290
SyntenyLsi11G014290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK94087.1 unknown [Populus trichocarpa]1.2e-0447.3Show/hide
Query:  MTHFHLRLVLAIFLLLLLTPTTAAAAVQA-RIPMRKQVIFRP---SSPSAQKFTDFEEQKRRVPTGSNPLHNKR
        M  FHL L+LA+ +    TP ++ AA ++   P   Q +FR    +SP A++  +FE QKR+VPTGSNPLHNKR
Subjt:  MTHFHLRLVLAIFLLLLLTPTTAAAAVQA-RIPMRKQVIFRP---SSPSAQKFTDFEEQKRRVPTGSNPLHNKR
KAG6572280.1 hypothetical protein SDJN03_29008, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1873.68Show/hide
Query:  MTHFHLRLVLAIFLLL--LLTPTTAAAAVQARIPMRKQVIFRPSSPSAQKFTDFEEQKRRVPTGSNPLHNKRLLLS
        MTHFHL LVLAIFLLL    T T A+AA Q RI MRKQV+FRP SPS  KFT++EEQKRRVPTGSNPLHNKR  +S
Subjt:  MTHFHLRLVLAIFLLL--LLTPTTAAAAVQARIPMRKQVIFRPSSPSAQKFTDFEEQKRRVPTGSNPLHNKRLLLS
KAG6589151.1 hypothetical protein SDJN03_17716, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1175.38Show/hide
Query:  MTHFHLRLVLAIFLLLLLTPTTAA----AAVQARIPMRKQVIFRPSSPSAQKFTDFEEQKRRVPT
        MTHFHLRL+L I LLLLLTPTTAA    AAV+ RI +RKQVIFRPSSPS  K  DFE+QKRRVPT
Subjt:  MTHFHLRLVLAIFLLLLLTPTTAA----AAVQARIPMRKQVIFRPSSPSAQKFTDFEEQKRRVPT
TrEMBL top hitse value%identityAlignment
A0A6J5UFG2 Uncharacterized protein8.5e-0447.83Show/hide
Query:  RLVLAIFLLLLLTPTTAAA---AVQARIPMRKQVIFRP--SSPSAQKFTDFEEQKRRVPTGSNPLHNKR
        +L L   LLL   PT   A   +  +  P R Q +FRP  S+PS ++   F+ +KRRVPTGSNPLHNKR
Subjt:  RLVLAIFLLLLLTPTTAAA---AVQARIPMRKQVIFRP--SSPSAQKFTDFEEQKRRVPTGSNPLHNKR
A0A6N2MF20 Uncharacterized protein6.5e-0444.19Show/hide
Query:  MTHFHLRLVLAIFLLLLLTPTTAAAAVQA-RIPMRKQVIFR---PSSPSAQKFTDFEEQKRRVPTGSNPLHNKRLLLSIGVLIIQY
        M  F L L+LA+ +    TP +  A  ++   P   Q  FR    SSP A++  +FE QKRRVPTGSNPLHNKR  L +G++I  +
Subjt:  MTHFHLRLVLAIFLLLLLTPTTAAAAVQA-RIPMRKQVIFR---PSSPSAQKFTDFEEQKRRVPTGSNPLHNKRLLLSIGVLIIQY
A9PCI4 Uncharacterized protein5.9e-0547.3Show/hide
Query:  MTHFHLRLVLAIFLLLLLTPTTAAAAVQA-RIPMRKQVIFRP---SSPSAQKFTDFEEQKRRVPTGSNPLHNKR
        M  FHL L+LA+ +    TP ++ AA ++   P   Q +FR    +SP A++  +FE QKR+VPTGSNPLHNKR
Subjt:  MTHFHLRLVLAIFLLLLLTPTTAAAAVQA-RIPMRKQVIFRP---SSPSAQKFTDFEEQKRRVPTGSNPLHNKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACAAATATGACTCATTTCCACCTCCGTCTTGTTCTTGCCATTTTTCTTCTTCTTCTTCTAACTCCGACCACCGCCGCCGCCGCCGTCCAGGCAAGGATTCCGAT
GAGAAAACAAGTGATTTTCCGGCCGTCTTCACCGTCAGCACAAAAATTTACAGACTTTGAAGAACAAAAGCGAAGAGTCCCCACAGGATCAAACCCTTTACACAACAAAC
GGCTACTACTCTCTATTGGAGTTTTGATTATACAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTACAAATATGACTCATTTCCACCTCCGTCTTGTTCTTGCCATTTTTCTTCTTCTTCTTCTAACTCCGACCACCGCCGCCGCCGCCGTCCAGGCAAGGATTCCGAT
GAGAAAACAAGTGATTTTCCGGCCGTCTTCACCGTCAGCACAAAAATTTACAGACTTTGAAGAACAAAAGCGAAGAGTCCCCACAGGATCAAACCCTTTACACAACAAAC
GGCTACTACTCTCTATTGGAGTTTTGATTATACAATATTAA
Protein sequenceShow/hide protein sequence
MLTNMTHFHLRLVLAIFLLLLLTPTTAAAAVQARIPMRKQVIFRPSSPSAQKFTDFEEQKRRVPTGSNPLHNKRLLLSIGVLIIQY