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Lsi11G014350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:22898273..22899008
RNA-Seq ExpressionLsi11G014350
SyntenyLsi11G014350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON44356.1 hypothetical protein PanWU01x14_267450, partial [Parasponia andersonii]1.1e-0441.46Show/hide
Query:  LAGEISKRSSNLDIILLTERNPDFSKIRGFNESVEQNRRSPIVGDIASKFSRRIIDGQQRQHRVHHHNRRLQLPIGRRHQHV
        L  EI   SS L+I+LLT+RNP  S++    + VE+  RS IV  + +    R+I GQ RQ+RV  ++RRL   + R ++HV
Subjt:  LAGEISKRSSNLDIILLTERNPDFSKIRGFNESVEQNRRSPIVGDIASKFSRRIIDGQQRQHRVHHHNRRLQLPIGRRHQHV
TrEMBL top hitse value%identityAlignment
A0A287X326 Uncharacterized protein4.6e-0433.33Show/hide
Query:  LMAVDGRRLAGEISKRSSNLDIILLTERNPDFSKIRGFNESVEQNRRSPIVGDIASKFSRRIIDGQQRQHRVHHHNRRLQLPIGRRHQHVHWR
        L+A  G  L GE+  R + LD +L  E +P      G    +E  +R+ +VGD+  +   R++ GQ  + RV  H RRL + +G  ++HV  R
Subjt:  LMAVDGRRLAGEISKRSSNLDIILLTERNPDFSKIRGFNESVEQNRRSPIVGDIASKFSRRIIDGQQRQHRVHHHNRRLQLPIGRRHQHVHWR
A0A2P5B6H6 Uncharacterized protein (Fragment)5.4e-0541.46Show/hide
Query:  LAGEISKRSSNLDIILLTERNPDFSKIRGFNESVEQNRRSPIVGDIASKFSRRIIDGQQRQHRVHHHNRRLQLPIGRRHQHV
        L  EI   SS L+I+LLT+RNP  S++    + VE+  RS IV  + +    R+I GQ RQ+RV  ++RRL   + R ++HV
Subjt:  LAGEISKRSSNLDIILLTERNPDFSKIRGFNESVEQNRRSPIVGDIASKFSRRIIDGQQRQHRVHHHNRRLQLPIGRRHQHV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCTTCATCCTCTTCTCCTCCTGCCAGAACTCATGGCCGTCGACGGACGGAGACTCGCCGGAGAAATATCTAAACGGAGCTCTAACTTGGACATTATACTTCTTAC
AGAAAGGAACCCAGATTTTAGCAAAATTCGAGGCTTCAACGAGAGCGTAGAGCAAAATCGGAGATCCCCCATCGTCGGAGACATAGCAAGTAAGTTTTCTCGCCGGATAA
TCGACGGCCAACAGAGACAACACCGTGTTCACCACCATAATCGACGGCTCCAGCTTCCAATCGGCCGTCGTCACCAACACGTCCACTGGAGGAACTTCCGAGGCAAATGG
GTTAAGGAATTGGACATTGTCGGAGATCGGAGAGATTCCGGTGATCGGCGTCCCGACCGAAGTATTGCTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACCTTCATCCTCTTCTCCTCCTGCCAGAACTCATGGCCGTCGACGGACGGAGACTCGCCGGAGAAATATCTAAACGGAGCTCTAACTTGGACATTATACTTCTTAC
AGAAAGGAACCCAGATTTTAGCAAAATTCGAGGCTTCAACGAGAGCGTAGAGCAAAATCGGAGATCCCCCATCGTCGGAGACATAGCAAGTAAGTTTTCTCGCCGGATAA
TCGACGGCCAACAGAGACAACACCGTGTTCACCACCATAATCGACGGCTCCAGCTTCCAATCGGCCGTCGTCACCAACACGTCCACTGGAGGAACTTCCGAGGCAAATGG
GTTAAGGAATTGGACATTGTCGGAGATCGGAGAGATTCCGGTGATCGGCGTCCCGACCGAAGTATTGCTCTGTAA
Protein sequenceShow/hide protein sequence
MYLHPLLLLPELMAVDGRRLAGEISKRSSNLDIILLTERNPDFSKIRGFNESVEQNRRSPIVGDIASKFSRRIIDGQQRQHRVHHHNRRLQLPIGRRHQHVHWRNFRGKW
VKELDIVGDRRDSGDRRPDRSIAL