CuGenDBv2

Gene ID	Lsi11G014520
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ThiF domain-containing protein
Genome location	chr11:23055051..23055422
RNA-Seq Expression	Lsi11G014520
Synteny	Lsi11G014520
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-52

88.1

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Query:  MNRKSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS
        MNR+SR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTRSSSLSP + PIDS LLQVNIVDASP FAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRKSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS

Query:  LWFLTSSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLTSSPTNLTPDSPPDPVIEVLGG

XP_008455441.1 PREDICTED: uncharacterized protein LOC103495597 [Cucumis melo]

1.0e-52

92.68

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Query:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
        MNR+SRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYST SSSL     PIDSGLLQVNIVDASPSFAGRVYGPL LQRKKLLASKSLWF
Subjt:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF

Query:  LTSSPTNLTPDSPPDPVIEVLGG
        L SSPTNLTPDSPPDPVIEVLGG
Subjt:  LTSSPTNLTPDSPPDPVIEVLGG

XP_022952539.1 uncharacterized protein LOC111455201 [Cucurbita moschata]

4.5e-53

91.13

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Query:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASK-SLW
        MNR+SRRSGNS SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPS+ PI SGLLQVNI DASP FAGRVYGPLCLQRKKLLA+K SLW
Subjt:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASK-SLW

Query:  FLTSSPTNLTPDSPPDPVIEVLGG
        FL SSPTNLTPDSPPDPVI VLGG
Subjt:  FLTSSPTNLTPDSPPDPVIEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]

2.2e-52

88.89

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Query:  MNRKSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS
        MNR+SR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSP + PIDS LLQVNIVDASP FAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRKSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS

Query:  LWFLTSSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLTSSPTNLTPDSPPDPVIEVLGG

XP_038888488.1 uncharacterized protein LOC120078321 [Benincasa hispida]

1.5e-56

95.93

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Query:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
        MNR+SRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSS  PS++PIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
Subjt:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF

Query:  LTSSPTNLTPDSPPDPVIEVLGG
        LTSSPTNLTPDSPPDPVIEVLGG
Subjt:  LTSSPTNLTPDSPPDPVIEVLGG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C0X0 uncharacterized protein LOC103495597

4.9e-53

92.68

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Query:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
        MNR+SRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYST SSSL     PIDSGLLQVNIVDASPSFAGRVYGPL LQRKKLLASKSLWF
Subjt:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF

Query:  LTSSPTNLTPDSPPDPVIEVLGG
        L SSPTNLTPDSPPDPVIEVLGG
Subjt:  LTSSPTNLTPDSPPDPVIEVLGG

A0A5D3C9X6 Uncharacterized protein

4.9e-53

92.68

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Query:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
        MNR+SRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYST SSSL     PIDSGLLQVNIVDASPSFAGRVYGPL LQRKKLLASKSLWF
Subjt:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF

Query:  LTSSPTNLTPDSPPDPVIEVLGG
        L SSPTNLTPDSPPDPVIEVLGG
Subjt:  LTSSPTNLTPDSPPDPVIEVLGG

A0A6J1EXJ2 uncharacterized protein LOC111437092

5.4e-52

88.1

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Query:  MNRKSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS
        MNR+SR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLSP + PIDS LLQVNIVDASP FAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRKSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS

Query:  LWFLTSSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLTSSPTNLTPDSPPDPVIEVLGG

A0A6J1GLZ8 uncharacterized protein LOC111455201

2.2e-53

91.13

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Query:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASK-SLW
        MNR+SRRSGNS SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPS+ PI SGLLQVNI DASP FAGRVYGPLCLQRKKLLA+K SLW
Subjt:  MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASK-SLW

Query:  FLTSSPTNLTPDSPPDPVIEVLGG
        FL SSPTNLTPDSPPDPVI VLGG
Subjt:  FLTSSPTNLTPDSPPDPVIEVLGG

A0A6J1JMJ5 uncharacterized protein LOC111486563

1.6e-51

88.1

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Query:  MNRKSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS
        MNR+SR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSP + PIDS LLQVNIVDASP FAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRKSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS

Query:  LWFLTSSPTNLTPDSPPDPVIEVLGG
        LWFL+SS TNLTPDSPPDPVIEVLGG
Subjt:  LWFLTSSPTNLTPDSPPDPVIEVLGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

5.2e-07

31.62

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Query:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWFLTSSPT
        RS   +++ FH+Y+KPGALAQIRN+R+    +   L   +        S S  PI +   Q   +D  P    ++YGP  + RKKL  ++      S+  
Subjt:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWFLTSSPT

Query:  NLTPDSPPDPVIEVLGG
         L P   P+ ++E + G
Subjt:  NLTPDSPPDPVIEVLGG

AT5G54970.1 unknown protein

5.0e-10

39.36

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Query:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVN--IVDASPSFAGRVYGPLCLQRKKLLASKSL
        +S   +S+ FH+YLKPGALAQIRNSR+ AR     +     S     +SPS   +D          +D  P    ++YGP   QRKKL A++S+
Subjt:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVN--IVDASPSFAGRVYGPLCLQRKKLLASKSL

Sequences

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CDS sequence

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ATGAATCGAAAATCCAGAAGATCGGGGAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAGCCCGGTGCGCTAGCACAAATTCGCAATTCTCGGATGATCGCTCGATT
CAATCGGGTCAATTTGGTCTCTCAGATCTACTCCACTCGTTCATCATCGCTATCTCCTTCCAGTGTACCGATCGACTCGGGTCTACTTCAGGTCAACATTGTTGATGCTT
CTCCTTCCTTTGCTGGGAGGGTGTACGGCCCTCTCTGCTTGCAGAGGAAGAAACTTTTGGCTTCTAAGTCTTTGTGGTTTCTCACTTCTAGCCCCACCAATCTCACACCC
GATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGCTGA

mRNA sequence

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Protein sequence

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MNRKSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSSVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWFLTSSPTNLTP
DSPPDPVIEVLGG

Lsi11G014520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome