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Lsi11G014640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionVascular-related unknown protein 1
Genome locationchr11:23213987..23214985
RNA-Seq ExpressionLsi11G014640
SyntenyLsi11G014640
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455422.1 PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]1.0e-4979.45Show/hide
Query:  NNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSE-IERESSYLCSSIGSCSNWD--HNISDPNYDIN-NINVGRKVIFDVP--NNLTFKKTRTQK
        NNAT +  DSP ENS AAGAEEQEESGWTDYLEDYFNSE +ERESS+LCSSIGSCSNWD  +NIS PNYDIN NINVG     D P  NNLTFKKTRTQK
Subjt:  NNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSE-IERESSYLCSSIGSCSNWD--HNISDPNYDIN-NINVGRKVIFDVP--NNLTFKKTRTQK

Query:  LFE-DDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST
        +FE DDSLQDTATSPIHSPKV DLKVRTS E+PRFDDHIT+  NST
Subjt:  LFE-DDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST

XP_011658705.1 vascular-related unknown protein 1 [Cucumis sativus]4.1e-4372.67Show/hide
Query:  MEKN-NATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSE-IERESSYLCSSIGSCSNWD--HNISDPNYDIN-NINVGRKVIFDVP--NNLTFKKT
        ME N +AT +  DS  ENS A   EEQEESGWTDYLEDYFNSE +ERESS+LCSSIGSCSNWD  +NIS P+YDIN NIN+G     D P  NNLTFKKT
Subjt:  MEKN-NATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSE-IERESSYLCSSIGSCSNWD--HNISDPNYDIN-NINVGRKVIFDVP--NNLTFKKT

Query:  RTQKLFE-DDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST
        RTQK+FE DDSLQDTATSPIHSPKV DLKVRTS E+  FDDHIT+  NST
Subjt:  RTQKLFE-DDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST

XP_022136166.1 uncharacterized protein LOC111007924 [Momordica charantia]5.0e-2558.27Show/hide
Query:  MEKNN--ATAEGADSPSENSVAAGAEEQEESGWTDYLEDYF-NSEIERESSYLCSSIGSCSNWDHNISDPNYDINNINVGRKVIFDVPNNL-TFKK-TRT
        MEKN      E   + + NS   G EE EESGWTDYLEDYF +S+IERE S+LCSSIGSCS+ D N +         +VG +V  D P  L  FKK TRT
Subjt:  MEKNN--ATAEGADSPSENSVAAGAEEQEESGWTDYLEDYF-NSEIERESSYLCSSIGSCSNWDHNISDPNYDINNINVGRKVIFDVPNNL-TFKK-TRT

Query:  QKLFEDDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDH
        QK+F+DDSL+DTATSP+HSPKVADLKV+T H + +FDDH
Subjt:  QKLFEDDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDH

XP_022930798.1 vascular-related unknown protein 1-like [Cucurbita moschata]3.0e-2560.77Show/hide
Query:  MEKNNATAEGADSPSE--NSVAAGAEEQEESGWTDYLEDYFNSEIERESSYL-CSSIGSCSNWDHNISDPNYD-INNI----NVGRKVIFDVPNNLTFKK
        M+K NA A G D P E  +S A GAEE  ESGWT+YLEDY  SEIER+SS+L CSS GSCS WD  IS+ N + IN +    +VG +VI D PN L+FKK
Subjt:  MEKNNATAEGADSPSE--NSVAAGAEEQEESGWTDYLEDYFNSEIERESSYL-CSSIGSCSNWDHNISDPNYD-INNI----NVGRKVIFDVPNNLTFKK

Query:  TRTQKLFEDDSLQDTATSPIHSPKVADLKV
        T TQ++F+DDSL+DTATSP+ +PKVADL V
Subjt:  TRTQKLFEDDSLQDTATSPIHSPKVADLKV

XP_038888852.1 vascular-related unknown protein 1-like [Benincasa hispida]2.2e-5277.85Show/hide
Query:  MEKNNATAEGADSPSENS-------VAAGAEEQEESGWTDYLEDYFNSEIERESSYLCSSIGSCSNWDHNISDPNYDINNINVGRKVIFDVPNNLTFKKT
        MEKNNATAEG+DSP ENS        AAGAEEQEESGWTDYLEDYF+S    ESSYLCSSIGSCSNWDHNIS+PNYDIN  N   K+IFDVPN LTFKKT
Subjt:  MEKNNATAEGADSPSENS-------VAAGAEEQEESGWTDYLEDYFNSEIERESSYLCSSIGSCSNWDHNISDPNYDINNINVGRKVIFDVPNNLTFKKT

Query:  RTQKLFEDDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST
        RTQK+FEDDSLQDTATSPIHSPKVADLKV+TSHE+PRFD    ++TN T
Subjt:  RTQKLFEDDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST

TrEMBL top hitse value%identityAlignment
A0A0A0K3L1 Uncharacterized protein2.0e-4372.67Show/hide
Query:  MEKN-NATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSE-IERESSYLCSSIGSCSNWD--HNISDPNYDIN-NINVGRKVIFDVP--NNLTFKKT
        ME N +AT +  DS  ENS A   EEQEESGWTDYLEDYFNSE +ERESS+LCSSIGSCSNWD  +NIS P+YDIN NIN+G     D P  NNLTFKKT
Subjt:  MEKN-NATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSE-IERESSYLCSSIGSCSNWD--HNISDPNYDIN-NINVGRKVIFDVP--NNLTFKKT

Query:  RTQKLFE-DDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST
        RTQK+FE DDSLQDTATSPIHSPKV DLKVRTS E+  FDDHIT+  NST
Subjt:  RTQKLFE-DDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST

A0A1S3C0F7 uncharacterized protein LOC1034955854.9e-5079.45Show/hide
Query:  NNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSE-IERESSYLCSSIGSCSNWD--HNISDPNYDIN-NINVGRKVIFDVP--NNLTFKKTRTQK
        NNAT +  DSP ENS AAGAEEQEESGWTDYLEDYFNSE +ERESS+LCSSIGSCSNWD  +NIS PNYDIN NINVG     D P  NNLTFKKTRTQK
Subjt:  NNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSE-IERESSYLCSSIGSCSNWD--HNISDPNYDIN-NINVGRKVIFDVP--NNLTFKKTRTQK

Query:  LFE-DDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST
        +FE DDSLQDTATSPIHSPKV DLKVRTS E+PRFDDHIT+  NST
Subjt:  LFE-DDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDHITMVTNST

A0A6J1C2S1 uncharacterized protein LOC1110079242.4e-2558.27Show/hide
Query:  MEKNN--ATAEGADSPSENSVAAGAEEQEESGWTDYLEDYF-NSEIERESSYLCSSIGSCSNWDHNISDPNYDINNINVGRKVIFDVPNNL-TFKK-TRT
        MEKN      E   + + NS   G EE EESGWTDYLEDYF +S+IERE S+LCSSIGSCS+ D N +         +VG +V  D P  L  FKK TRT
Subjt:  MEKNN--ATAEGADSPSENSVAAGAEEQEESGWTDYLEDYF-NSEIERESSYLCSSIGSCSNWDHNISDPNYDINNINVGRKVIFDVPNNL-TFKK-TRT

Query:  QKLFEDDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDH
        QK+F+DDSL+DTATSP+HSPKVADLKV+T H + +FDDH
Subjt:  QKLFEDDSLQDTATSPIHSPKVADLKVRTSHEDPRFDDH

A0A6J1ESI7 Uncharacterized protein1.4e-2560.77Show/hide
Query:  MEKNNATAEGADSPSE--NSVAAGAEEQEESGWTDYLEDYFNSEIERESSYL-CSSIGSCSNWDHNISDPNYD-INNI----NVGRKVIFDVPNNLTFKK
        M+K NA A G D P E  +S A GAEE  ESGWT+YLEDY  SEIER+SS+L CSS GSCS WD  IS+ N + IN +    +VG +VI D PN L+FKK
Subjt:  MEKNNATAEGADSPSE--NSVAAGAEEQEESGWTDYLEDYFNSEIERESSYL-CSSIGSCSNWDHNISDPNYD-INNI----NVGRKVIFDVPNNLTFKK

Query:  TRTQKLFEDDSLQDTATSPIHSPKVADLKV
        T TQ++F+DDSL+DTATSP+ +PKVADL V
Subjt:  TRTQKLFEDDSLQDTATSPIHSPKVADLKV

A0A6J1JN61 Uncharacterized protein1.1e-2258.46Show/hide
Query:  MEKNNATAEGADSPSE--NSVAAGAEEQEESGWTDYLEDYFNSEIERESSYL-CSSIGSCSNWDHNISDPNYDINN-----INVGRKVIFDVPNNLTFKK
        M+K NA   G D P E  +S A GAEE EESGWT+YLEDY  SEIER+SS+L CSS GSCS WD  IS+ N +  N      +VG +VI D PN L+ KK
Subjt:  MEKNNATAEGADSPSE--NSVAAGAEEQEESGWTDYLEDYFNSEIERESSYL-CSSIGSCSNWDHNISDPNYDINN-----INVGRKVIFDVPNNLTFKK

Query:  TRTQKLFEDDSLQDTATSPIHSPKVADLKV
        T TQ +F+DDSL+DTATSP+ +PKVAD  V
Subjt:  TRTQKLFEDDSLQDTATSPIHSPKVADLKV

SwissProt top hitse value%identityAlignment
Q9LSZ3 Vascular-related unknown protein 11.7e-0734.11Show/hide
Query:  EKNNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFN---------SEIERESSY--LCSSIGSCSN-WDHNISDPNYDINNINVGRKVIFDVPNNLT
        E+N+   +  D  + +  + G + QEESGWT YL+D+ N         ++ + +SSY  L +S    S+   H  S  ++ +N            P  L 
Subjt:  EKNNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFN---------SEIERESSY--LCSSIGSCSN-WDHNISDPNYDINNINVGRKVIFDVPNNLT

Query:  FKKTRTQKLFEDDSLQDTATSPIHSPKVA
        F + RT+K+ EDDSL+DTA+SP++SPKV+
Subjt:  FKKTRTQKLFEDDSLQDTATSPIHSPKVA

Arabidopsis top hitse value%identityAlignment
AT3G21710.1 unknown protein1.2e-0834.11Show/hide
Query:  EKNNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFN---------SEIERESSY--LCSSIGSCSN-WDHNISDPNYDINNINVGRKVIFDVPNNLT
        E+N+   +  D  + +  + G + QEESGWT YL+D+ N         ++ + +SSY  L +S    S+   H  S  ++ +N            P  L 
Subjt:  EKNNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFN---------SEIERESSY--LCSSIGSCSN-WDHNISDPNYDINNINVGRKVIFDVPNNLT

Query:  FKKTRTQKLFEDDSLQDTATSPIHSPKVA
        F + RT+K+ EDDSL+DTA+SP++SPKV+
Subjt:  FKKTRTQKLFEDDSLQDTATSPIHSPKVA

AT3G21710.2 unknown protein1.2e-0834.11Show/hide
Query:  EKNNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFN---------SEIERESSY--LCSSIGSCSN-WDHNISDPNYDINNINVGRKVIFDVPNNLT
        E+N+   +  D  + +  + G + QEESGWT YL+D+ N         ++ + +SSY  L +S    S+   H  S  ++ +N            P  L 
Subjt:  EKNNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFN---------SEIERESSY--LCSSIGSCSN-WDHNISDPNYDINNINVGRKVIFDVPNNLT

Query:  FKKTRTQKLFEDDSLQDTATSPIHSPKVA
        F + RT+K+ EDDSL+DTA+SP++SPKV+
Subjt:  FKKTRTQKLFEDDSLQDTATSPIHSPKVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAACAACGCCACGGCTGAAGGTGCTGATTCCCCGTCGGAAAATTCCGTGGCTGCCGGAGCTGAAGAGCAAGAAGAGAGTGGTTGGACTGATTACTTGGAGGA
TTATTTCAACTCAGAAATTGAAAGAGAAAGCAGTTATTTGTGTTCGAGCATTGGGAGTTGTTCAAATTGGGATCATAATATTTCAGATCCCAATTATGATATTAATAATA
TCAATGTTGGGAGGAAAGTGATTTTTGATGTCCCAAACAATCTAACTTTCAAGAAAACCAGAACTCAGAAGCTTTTTGAGGATGATTCCTTACAAGATACAGCTACTTCT
CCTATTCATAGCCCAAAAGTGGCTGATTTGAAAGTAAGAACATCCCATGAAGATCCGAGGTTTGATGATCACATAACAATGGTTACTAATTCCACGGTAATTGCTCTCTC
TTCTTTCTTCTCTTCATTTTACTGTCGATAA
mRNA sequenceShow/hide mRNA sequence
CTCCATTTCTTAAACTCCCTCTACCAAACCTCTCCCCTCTCCTCCTCTCTTCTCTCTATTCTTTTCATGGAGAAGAACAACGCCACGGCTGAAGGTGCTGATTCCCCGTC
GGAAAATTCCGTGGCTGCCGGAGCTGAAGAGCAAGAAGAGAGTGGTTGGACTGATTACTTGGAGGATTATTTCAACTCAGAAATTGAAAGAGAAAGCAGTTATTTGTGTT
CGAGCATTGGGAGTTGTTCAAATTGGGATCATAATATTTCAGATCCCAATTATGATATTAATAATATCAATGTTGGGAGGAAAGTGATTTTTGATGTCCCAAACAATCTA
ACTTTCAAGAAAACCAGAACTCAGAAGCTTTTTGAGGATGATTCCTTACAAGATACAGCTACTTCTCCTATTCATAGCCCAAAAGTGGCTGATTTGAAAGTAAGAACATC
CCATGAAGATCCGAGGTTTGATGATCACATAACAATGGTTACTAATTCCACGGTAATTGCTCTCTCTTCTTTCTTCTCTTCATTTTACTGTCGATAAATTATATCTGACA
GTTTTAAACCGTTGGATGACGTAGAAAAGAAAATTATGGGTGTCCTTTTTTTTAAAAAAAAAAAAACCCAATTGATGAATTTTGTAGGGATCAAGCGGAAGGCAATTGGG
GAAATATTATTCAAACAAAGAAAAGGGTGTGTATTCAGCTGAGAAAAAAGGGTTGTGTTTGTTTCCTTTGTCCATGCTACTTAATTACCATAATTGAGATGTAATTTAAG
CGTAATAATCATTAAAATCTCTATGTAACTCAACTCTCTCTCAAACTAATTGGTATTATAATCCATTATTATTCTCTCTCTTTCTTCTTGTTTAATTGTTTCAAATTATT
CCACGAACAACAAGACTTTCCTCTTGACCAACCA
Protein sequenceShow/hide protein sequence
MEKNNATAEGADSPSENSVAAGAEEQEESGWTDYLEDYFNSEIERESSYLCSSIGSCSNWDHNISDPNYDINNINVGRKVIFDVPNNLTFKKTRTQKLFEDDSLQDTATS
PIHSPKVADLKVRTSHEDPRFDDHITMVTNSTVIALSSFFSSFYCR