; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G014650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranslation factor sui1, putative
Genome locationchr11:23224759..23226221
RNA-Seq ExpressionLsi11G014650
SyntenyLsi11G014650
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR001950 - SUI1 domain
IPR005874 - Eukaryotic translation initiation factor SUI1
IPR036877 - SUI1 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040255.1 putative translation factor sui1 [Cucumis melo var. makuwa]6.1e-5965.98Show/hide
Query:  MFCSFEQLNLRAHN------SFAGYLCSTSDSPVSY-----PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT
        MFCSFEQLNLRAH+       ++G     S+  V       PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT
Subjt:  MFCSFEQLNLRAHN------SFAGYLCSTSDSPVSY-----PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT

Query:  VVQDPELGQSVD-------FFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTAAYN
        VVQDPELGQ +        FFL         Y +     + N       GYTTSGRPKKECVY+PCAGW+CEEGK+QD RFLK IK VFTAAYN
Subjt:  VVQDPELGQSVD-------FFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTAAYN

KAF7805814.1 protein translation factor SUI1-like protein [Senna tora]7.7e-3860.71Show/hide
Query:  PVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNK
        P +Y PFA+ANAEDS AG K+YVHVR+QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTVV+DPELGQ                           
Subjt:  PVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNK

Query:  NLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLK
            V+ +TTSGR KKE  ++PCAGWH EEG YQD  FL+
Subjt:  NLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLK

KAG8479362.1 hypothetical protein CXB51_029902 [Gossypium anomalum]7.2e-3660.14Show/hide
Query:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV
        PFADANAEDSGAGAKEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQ +        D+              KN+   
Subjt:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV

Query:  IGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTA
        +            V +   GWHCEEGK+Q+P FL  I + F+A
Subjt:  IGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTA

KJB13598.1 hypothetical protein B456_002G083300 [Gossypium raimondii]6.1e-3563.49Show/hide
Query:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV
        PFADANAEDSGAGAKEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVV+DPELGQ                                
Subjt:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV

Query:  IGYTTSGRPKKECVYLPCAGWHCEEG
        + Y+ S R K+EC +LPC+G +CEEG
Subjt:  IGYTTSGRPKKECVYLPCAGWHCEEG

RYR21776.1 hypothetical protein Ahy_B03g067094 [Arachis hypogaea]3.8e-3762.24Show/hide
Query:  TSDSPVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHI
        T+ S    PFA+ANA+DSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSY KILKDLKKEFCCNGTVVQDPELGQ  DF      +R    G++     
Subjt:  TSDSPVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHI

Query:  MNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLK
                 G+T SGR KKE    PC   H +EG YQD  FL+
Subjt:  MNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLK

TrEMBL top hitse value%identityAlignment
A0A061F6N8 Translation initiation factor SUI1 family protein, putative5.0e-3557.34Show/hide
Query:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV
        PFADANAEDSGAGAKEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQ +                              
Subjt:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV

Query:  IGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTA
              G  +K        GWHCEEG++Q+P FL    + F+A
Subjt:  IGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTA

A0A0D2NJY1 SUI1 domain-containing protein3.0e-3563.49Show/hide
Query:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV
        PFADANAEDSGAGAKEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVV+DPELGQ                                
Subjt:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV

Query:  IGYTTSGRPKKECVYLPCAGWHCEEG
        + Y+ S R K+EC +LPC+G +CEEG
Subjt:  IGYTTSGRPKKECVYLPCAGWHCEEG

A0A445A5S9 SUI1 domain-containing protein1.9e-3762.24Show/hide
Query:  TSDSPVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHI
        T+ S    PFA+ANA+DSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSY KILKDLKKEFCCNGTVVQDPELGQ  DF      +R    G++     
Subjt:  TSDSPVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHI

Query:  MNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLK
                 G+T SGR KKE    PC   H +EG YQD  FL+
Subjt:  MNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLK

A0A5B6UGN0 Translation initiation factor SUI13.9e-3559.71Show/hide
Query:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV
        PFADANAEDSGAGAKEYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQ +        D+              KN+   
Subjt:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADRSFHYGLWFGLHIMNKNLDGV

Query:  IGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKI
        +            V     GWHCEEGK+Q+P FL   K+
Subjt:  IGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKI

A0A5D3C578 Putative translation factor sui12.9e-5965.98Show/hide
Query:  MFCSFEQLNLRAHN------SFAGYLCSTSDSPVSY-----PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT
        MFCSFEQLNLRAH+       ++G     S+  V       PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT
Subjt:  MFCSFEQLNLRAHN------SFAGYLCSTSDSPVSY-----PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT

Query:  VVQDPELGQSVD-------FFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTAAYN
        VVQDPELGQ +        FFL         Y +     + N       GYTTSGRPKKECVY+PCAGW+CEEGK+QD RFLK IK VFTAAYN
Subjt:  VVQDPELGQSVD-------FFLHKAADRSFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTAAYN

SwissProt top hitse value%identityAlignment
A6MZM2 Protein translation factor SUI1 homolog1.8e-2988.89Show/hide
Query:  PFADANAEDSG--AGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        PFA+ANA DSG  AG+K+YVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQ +
Subjt:  PFADANAEDSG--AGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

O48650 Protein translation factor SUI1 homolog7.3e-3188.57Show/hide
Query:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        PFA+ANAEDSGAG K+YVHVR+QQRNGRKSLTTVQGLKK++SYNKILKDLKKEFCCNGTVVQDPELGQ +
Subjt:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

P41568 Protein translation factor SUI1 homolog 12.8e-3082.05Show/hide
Query:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        S  P ++ PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQ +
Subjt:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

Q94JV4 Protein translation factor SUI1 homolog 22.1e-3088.57Show/hide
Query:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTVVQD ELGQ +
Subjt:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

Q9SQF4 Protein translation factor SUI1 homolog2.8e-3082.05Show/hide
Query:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        S  P ++ PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQ +
Subjt:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

Arabidopsis top hitse value%identityAlignment
AT1G54290.1 Translation initiation factor SUI1 family protein1.5e-3188.57Show/hide
Query:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTVVQD ELGQ +
Subjt:  PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

AT4G27130.1 Translation initiation factor SUI1 family protein2.0e-3182.05Show/hide
Query:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        S  P ++ PFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQ +
Subjt:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

AT5G54760.1 Translation initiation factor SUI1 family protein5.7e-3180.77Show/hide
Query:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        S  P ++ PFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQ +
Subjt:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

AT5G54760.2 Translation initiation factor SUI1 family protein5.7e-3180.77Show/hide
Query:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        S  P ++ PFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQ +
Subjt:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV

AT5G54760.3 Translation initiation factor SUI1 family protein5.7e-3180.77Show/hide
Query:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV
        S  P ++ PFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQ +
Subjt:  SDSPVSY-PFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGCAGTTTTGAGCAGCTGAATTTGAGAGCCCATAATTCATTTGCTGGTTACCTGTGTTCTACTTCGGACAGCCCAGTTTCATACCCATTTGCTGATGCAAATGC
TGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGAATACAGCAACGCAACGGGAGAAAAAGTTTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATA
ACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGTCAGTTGATTTCTTTCTGCATAAAGCTGCTGACAGG
AGTTTTCATTATGGGTTGTGGTTTGGTTTACATATCATGAACAAGAATCTAGATGGTGTTATTGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCC
TTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATCCACGGTTTCTAAAGATCATCAAGATTGTGTTTACAGCAGCTTATAACTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGCAGTTTTGAGCAGCTGAATTTGAGAGCCCATAATTCATTTGCTGGTTACCTGTGTTCTACTTCGGACAGCCCAGTTTCATACCCATTTGCTGATGCAAATGC
TGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGAATACAGCAACGCAACGGGAGAAAAAGTTTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATA
ACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGTCAGTTGATTTCTTTCTGCATAAAGCTGCTGACAGG
AGTTTTCATTATGGGTTGTGGTTTGGTTTACATATCATGAACAAGAATCTAGATGGTGTTATTGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCC
TTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATCCACGGTTTCTAAAGATCATCAAGATTGTGTTTACAGCAGCTTATAACTTATAGTAGTGGACATAATATA
ACTATCTTTAGAACTTACGAGTACATGCTACAACTCTGGATAGATGTACGTTTGCTTTGCTTTGTTATGCAAACCAAGTTATGGATTGGTGGACCCTTTTAGTTAATAAT
ATGTTTCCTGCTTTCTCATCTCGACCGCAACTTTAGATCTTGACCTCTCATTGACCTGATTTTCGTTGATTTGTTTATAACATGCTCGAAATATAATTATGTGCAGAGCA
ATGTTCATCCATGAGTCCTGGTTTCTCGTGATCAAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTTCCGCATTCGGTACTCTTCCCCAACTCCTTATTGAGTTG
GTTCTCATTTTTCACTAATT
Protein sequenceShow/hide protein sequence
MFCSFEQLNLRAHNSFAGYLCSTSDSPVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQSVDFFLHKAADR
SFHYGLWFGLHIMNKNLDGVIGYTTSGRPKKECVYLPCAGWHCEEGKYQDPRFLKIIKIVFTAAYNL