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Lsi11G014670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationchr11:23235541..23235852
RNA-Seq ExpressionLsi11G014670
SyntenyLsi11G014670
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589175.1 hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3470.87Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDG SLVDFG++DGS IY+FFCPL D+  DDL+ARQ FF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

KGN43536.1 hypothetical protein Csa_020453 [Cucumis sativus]6.9e-3981.31Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTH---HNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFT-
        MKLVVQNLTGSLF+VEVEDDATVSDLRTQI  H   HNLPS RLIFIPDHN +RLI   DDGISLVDFG++DGSHIYIFF PLHDDDGDD+EAR+FFFT 
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTH---HNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFT-

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

XP_022136124.1 uncharacterized protein LOC111007894 [Momordica charantia]2.7e-2762.28Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHN--LPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPL-HDDDGD--------DLE
        MKL V+NLTGSLF+++V+DDATVSDL+ +I+ HHN  LPSDRLIFI D N  R I   DDG SLVD GV+DGSHIYIFF PL H+DD D        D  
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHN--LPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPL-HDDDGD--------DLE

Query:  ARQFFFTCPDLLLF
        +R FFFTC ++LLF
Subjt:  ARQFFFTCPDLLLF

XP_022930696.1 uncharacterized protein LOC111437093 [Cucurbita moschata]3.9e-3469.9Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDG SLVDFG++DGS IY+FFCPL ++  DDL+ARQ FF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

XP_022989504.1 uncharacterized protein LOC111486561 [Cucurbita maxima]2.5e-3673.79Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDGISLVDFG++DGS IYIFFCPL DD GDD++ARQ FF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

TrEMBL top hitse value%identityAlignment
A0A0A0K6V6 Ubiquitin-like domain-containing protein3.3e-3981.31Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTH---HNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFT-
        MKLVVQNLTGSLF+VEVEDDATVSDLRTQI  H   HNLPS RLIFIPDHN +RLI   DDGISLVDFG++DGSHIYIFF PLHDDDGDD+EAR+FFFT 
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTH---HNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFT-

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

A0A2P6RTX5 Ubiquitin-like domain-containing protein2.4e-2158.76Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFI--PDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFF
        MK+VV+NLTG+LF+V+V +DATV+DL+ +I T   LP DRLI I   DH+R   I D  DG+SL+D+GVQDGSHIYIFF PL DD G     ++FFF
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFI--PDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFF

A0A6J1C3E5 uncharacterized protein LOC1110078941.3e-2762.28Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHN--LPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPL-HDDDGD--------DLE
        MKL V+NLTGSLF+++V+DDATVSDL+ +I+ HHN  LPSDRLIFI D N  R I   DDG SLVD GV+DGSHIYIFF PL H+DD D        D  
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHN--LPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPL-HDDDGD--------DLE

Query:  ARQFFFTCPDLLLF
        +R FFFTC ++LLF
Subjt:  ARQFFFTCPDLLLF

A0A6J1ERN4 uncharacterized protein LOC1114370931.9e-3469.9Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDG SLVDFG++DGS IY+FFCPL ++  DDL+ARQ FF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

A0A6J1JPI4 uncharacterized protein LOC1114865611.2e-3673.79Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDGISLVDFG++DGS IYIFFCPL DD GDD++ARQ FF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32360.1 Ubiquitin-like superfamily protein2.7e-0939.74Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIF-IPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFF
        MK+ V+ +TG+    +V +DATV  ++ +I     LP  RLI  I D    RL+ + +D + L D GV + SHIY+FF
Subjt:  MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIF-IPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTCTGTTCTACGTTGAGGTTGAAGACGATGCGACTGTTTCCGATCTTAGAACCCAGATCACTACCCATCACAACCTCCC
TTCTGACCGTCTGATCTTTATTCCTGACCACAATCGCGACCGTCTGATCTGCGACGGCGATGATGGAATCTCGCTCGTTGATTTCGGTGTCCAAGATGGGTCCCACATTT
ACATCTTTTTCTGTCCGCTTCATGATGATGATGGTGATGATCTTGAAGCTCGTCAATTCTTCTTTACTTGTCCTGATCTTCTTCTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTCTGTTCTACGTTGAGGTTGAAGACGATGCGACTGTTTCCGATCTTAGAACCCAGATCACTACCCATCACAACCTCCC
TTCTGACCGTCTGATCTTTATTCCTGACCACAATCGCGACCGTCTGATCTGCGACGGCGATGATGGAATCTCGCTCGTTGATTTCGGTGTCCAAGATGGGTCCCACATTT
ACATCTTTTTCTGTCCGCTTCATGATGATGATGGTGATGATCTTGAAGCTCGTCAATTCTTCTTTACTTGTCCTGATCTTCTTCTCTTCTAG
Protein sequenceShow/hide protein sequence
MKLVVQNLTGSLFYVEVEDDATVSDLRTQITTHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVQDGSHIYIFFCPLHDDDGDDLEARQFFFTCPDLLLF