CuGenDBv2

Gene ID	Lsi11G014710
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	zinc finger CCCH domain-containing protein 40 isoform X1
Genome location	chr11:23272233..23279751
RNA-Seq Expression	Lsi11G014710
Synteny	Lsi11G014710
Gene Ontology terms	GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000571 - Zinc finger, CCCH-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008455415.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X5 [Cucumis melo]

2.6e-179

86.96

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Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAA S GR EYRGNDLRHKLDSRHSP QERDSRGRH PREYSSSWSLERHSDRKRRKKEHGD+
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
         RDYSGNLRISDRNEE DR+GK SS SRDTLEGQLNKMQTDIEMAE  KHQAEVYLDEKIQEVDSL SR+QELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD
        +S       RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++PGYHAS PFH LQ+D SASK+KMHA QD  ENSKRANESRQ+RGRTSSSVS+AD
Subjt:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD

Query:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        KVRGL+SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRES+ EAASGSLPF PPPPPPPIREF+HS+Y GEDQNVDVEVVDDE+E MD A
Subjt:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

XP_011658709.1 zinc finger CCCH domain-containing protein 13 isoform X4 [Cucumis sativus]

8.8e-180

86.7

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKG+CSRPSCSFAHGNAELRRFAAPS GR EYRGNDLRHKLDSRHSPLQERDSRGRH PREYSSSWSLERHSDRKRRKKEHGD+
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
         RDYSGNLRI DRNEE DR+GK SS SRDTLEGQLNK+QTDIEMAE  KHQAEVY+DEKIQEVDSLTSR+QELESQLYKERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  Y-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD
        +       SRSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDGEDPGYHAS PFHDLQ+D SASK+KMH  QD  EN KRANESRQ+RGRTSSSVS+AD
Subjt:  Y-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD

Query:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        KVRGL+SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRE++ EAASGSLPF PPPPPPPIREF+HS+Y GEDQNVDVEVVD+E+E MD A
Subjt:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

XP_038887776.1 zinc finger CCCH domain-containing protein 40 isoform X1 [Benincasa hispida]

8.0e-181

81.19

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFA  STGRQ+YRGNDLR KLDSRHSPLQERDSRGRH PREYSSSWS+ERHSDRKRRKKEHGDS
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
          DYSGNLRISDRNEEQDR+GK SSASRDTLEGQLNKMQ+DI+MAEHHKHQAEVYLDEKIQEVD LTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKR-------------------
        +S       RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP YHASGPFHDLQKD SASK+KMH+ QDT ENSKR                   
Subjt:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKR-------------------

Query:  --------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPP
                                  ANESRQKRG+TSSSVS ADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEI+NEVKEPRESTKEAASGSLPF PP
Subjt:  --------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPP

Query:  PPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        PPPPPI EFNHSRY  EDQNVDVEVVDDE E MD A
Subjt:  PPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

XP_038887777.1 zinc finger CCCH domain-containing protein 40 isoform X2 [Benincasa hispida]

9.8e-179

80.73

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFA  STGRQ+YRGNDLR KLDSRHSPLQERDSRGRH P +YSSSWS+ERHSDRKRRKKEHGDS
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
          DYSGNLRISDRNEEQDR+GK SSASRDTLEGQLNKMQ+DI+MAEHHKHQAEVYLDEKIQEVD LTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKR-------------------
        +S       RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP YHASGPFHDLQKD SASK+KMH+ QDT ENSKR                   
Subjt:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKR-------------------

Query:  --------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPP
                                  ANESRQKRG+TSSSVS ADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEI+NEVKEPRESTKEAASGSLPF PP
Subjt:  --------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPP

Query:  PPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        PPPPPI EFNHSRY  EDQNVDVEVVDDE E MD A
Subjt:  PPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

XP_038887782.1 zinc finger CCCH domain-containing protein 13 isoform X5 [Benincasa hispida]

2.6e-187

90.54

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFA  STGRQ+YRGNDLR KLDSRHSPLQERDSRGRH PREYSSSWS+ERHSDRKRRKKEHGDS
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
          DYSGNLRISDRNEEQDR+GK SSASRDTLEGQLNKMQ+DI+MAEHHKHQAEVYLDEKIQEVD LTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD
        +S       RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP YHASGPFHDLQKD SASK+KMH+ QDT ENSKRANESRQKRG+TSSSVS AD
Subjt:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD

Query:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        KVRGLESGVVVPLTSMAAHAVDEEVDIDLEI+NEVKEPRESTKEAASGSLPF PPPPPPPI EFNHSRY  EDQNVDVEVVDDE E MD A
Subjt:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K3L6 C3H1-type domain-containing protein

4.3e-180

86.7

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKG+CSRPSCSFAHGNAELRRFAAPS GR EYRGNDLRHKLDSRHSPLQERDSRGRH PREYSSSWSLERHSDRKRRKKEHGD+
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
         RDYSGNLRI DRNEE DR+GK SS SRDTLEGQLNK+QTDIEMAE  KHQAEVY+DEKIQEVDSLTSR+QELESQLYKERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  Y-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD
        +       SRSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDGEDPGYHAS PFHDLQ+D SASK+KMH  QD  EN KRANESRQ+RGRTSSSVS+AD
Subjt:  Y-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD

Query:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        KVRGL+SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRE++ EAASGSLPF PPPPPPPIREF+HS+Y GEDQNVDVEVVD+E+E MD A
Subjt:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

A0A1S3C0E8 zinc finger CCCH domain-containing protein 40 isoform X1

3.9e-173

77.98

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAA S GR EYRGNDLRHKLDSRHSP QERDSRGRH PREYSSSWSLERHSDRKRRKKEHGD+
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
         RDYSGNLRISDRNEE DR+GK SS SRDTLEGQLNKMQTDIEMAE  KHQAEVYLDEKIQEVDSL SR+QELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKR-------------------
        +S       RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++PGYHAS PFH LQ+D SASK+KMHA QD  ENSKR                   
Subjt:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKR-------------------

Query:  --------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPP
                                  ANESRQ+RGRTSSSVS+ADKVRGL+SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRES+ EAASGSLPF PP
Subjt:  --------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPP

Query:  PPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        PPPPPIREF+HS+Y GEDQNVDVEVVDDE+E MD A
Subjt:  PPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

A0A1S3C101 zinc finger CCCH domain-containing protein 40 isoform X2

4.7e-171

77.52

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAA S GR EYRGNDLRHKLDSRHSP QERDSRGRH P +YSSSWSLERHSDRKRRKKEHGD+
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
         RDYSGNLRISDRNEE DR+GK SS SRDTLEGQLNKMQTDIEMAE  KHQAEVYLDEKIQEVDSL SR+QELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKR-------------------
        +S       RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++PGYHAS PFH LQ+D SASK+KMHA QD  ENSKR                   
Subjt:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKR-------------------

Query:  --------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPP
                                  ANESRQ+RGRTSSSVS+ADKVRGL+SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRES+ EAASGSLPF PP
Subjt:  --------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPP

Query:  PPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        PPPPPIREF+HS+Y GEDQNVDVEVVDDE+E MD A
Subjt:  PPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

A0A1S3C237 zinc finger CCCH domain-containing protein 13 isoform X5

1.2e-179

86.96

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAA S GR EYRGNDLRHKLDSRHSP QERDSRGRH PREYSSSWSLERHSDRKRRKKEHGD+
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
         RDYSGNLRISDRNEE DR+GK SS SRDTLEGQLNKMQTDIEMAE  KHQAEVYLDEKIQEVDSL SR+QELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD
        +S       RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++PGYHAS PFH LQ+D SASK+KMHA QD  ENSKRANESRQ+RGRTSSSVS+AD
Subjt:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD

Query:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        KVRGL+SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRES+ EAASGSLPF PPPPPPPIREF+HS+Y GEDQNVDVEVVDDE+E MD A
Subjt:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

A0A6J1JKJ8 zinc finger CCCH domain-containing protein 13-like isoform X3

3.6e-171

84.4

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS
        M+VG KLFKTKLCVLYQKG CSRPSCSFAHG AELRRFA    GR+EYRGNDLRHKLDSRHSPLQERDSRGRHGPR+YSSSWSLER SDRKRRKKE+GDS
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDS

Query:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR
        R DYSGNLRISDR+EE+DREGK SSASRDTLEGQLNKMQ DIEMAEHHKHQAEVYLDE+IQEVDSLTSRIQELESQLYKER++ RRIKSKIKKFVKAHNR
Subjt:  RRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD
        YS       RSQ RLQQLGDQLG DVNKIGANEEDSSINIVSDGEDPG+HA  P HDLQKDNSASKKK H  QD  ENSKRANES+QKRGRTS++VS+AD
Subjt:  YS-------RSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTAD

Query:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA
        KVRGLESGVVVPLTSMAAHAVDEEVDI+LEINN+V E RE+TKEA+ GSLP FPPPPPPPIRE NHSRY  EDQNVDV  +DDER  +D A
Subjt:  KVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVA

SwissProt top hits

e value

%identity

Alignment

Q6H7U2 Zinc finger CCCH domain-containing protein 13

4.4e-41

33.81

Show/hide

Query:  FKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPST--------GRQEYRGNDLRHKLDSRHSPLQE----RDSRG-------RHGPREYSSSWSL--ER
        +KTKLC L+Q+G+C+R +CSFAHG+ ++RR   PS+        GR++YR  D R ++D R SP +     R+SRG       R   RE  SS+S    R
Subjt:  FKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPST--------GRQEYRGNDLRHKLDSRHSPLQE----RDSRG-------RHGPREYSSSWSL--ER

Query:  HSDRKRRKKEHGDSRRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRR
         S+R+  KK   D   + S +L +SD N+E+ ++  +S   ++  E QL +++ D+E     K Q EV LDEKI EV  ++S++ +LE QL +E+ EC R
Subjt:  HSDRKRRKKEHGDSRRDYSGNLRISDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRR

Query:  IKSKIKKFVKAHNRY-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPF---HDLQKDNSASKKKMHAAQDTIENSKRAN
        + SK+KKF+KAH R+        RSQ R ++LGD L  D+ K GANEE SS+N   +   P   A+      +   ++  A KK+     DT+  S +  
Subjt:  IKSKIKKFVKAHNRY-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPF---HDLQKDNSASKKKMHAAQDTIENSKRAN

Query:  ESRQKRGRTSSSVST-----------------------ADKVRGLESGVVVPLTSMAAHAVDE-EVDIDLEINNEVKE---PRESTKEAASGSLPFFPPP
               +TS                             +KV+G     V+P T MAAHA+D+    I+LE  +E  +     ++  +  S ++P     
Subjt:  ESRQKRGRTSSSVST-----------------------ADKVRGLESGVVVPLTSMAAHAVDE-EVDIDLEINNEVKE---PRESTKEAASGSLPFFPPP

Query:  PPPPIREFNHSRYAGEDQNVDVE
         PPP+ +  + +Y G+D+ VDVE
Subjt:  PPPPIREFNHSRYAGEDQNVDVE

Q93XW7 Zinc finger CCCH domain-containing protein 40

6.4e-40

34.75

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Query:  MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAAPS-TGRQEYRGNDLRHKLDSRHSPLQER-------------DSRGRHGPR--EYSSSWSL
        M G  ++KTKLC+L+ K G CSRP+C+FAHGNAELRR    S TGR+    +DLR +  +  S L++R             D  GR   R   + +S   
Subjt:  MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAAPS-TGRQEYRGNDLRHKLDSRHSPLQER-------------DSRGRHGPR--EYSSSWSL

Query:  ERHSDRKRRKKEHGDSRRDYSGNLRISDRNEEQDREGKTS-SASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQE
        E   D+  R+    D RRDY+G L++ +R E++  +G+       + LE QL  ++ D++M    K + E  ++ K  EVD LTSRIQELE+QL +E+ E
Subjt:  ERHSDRKRRKKEHGDSRRDYSGNLRISDRNEEQDREGKTS-SASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQE

Query:  CRRIKSKIKKFVKAHNRY-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYH---ASGPFHDLQKDNSASKKKMHAAQDT-----
        CRRI S  KKFVK +NR+        RS+ RLQ+LG+QL   +     N  D  ++IVSD E  G +   A  P ++LQ  +S S+KK +  Q T     
Subjt:  CRRIKSKIKKFVKAHNRY-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYH---ASGPFHDLQKDNSASKKKMHAAQDT-----

Query:  ------------IENSKR-------------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEIN
                    +EN K+                               + E   KR R S   S  DK        V+  TSMAA   D          
Subjt:  ------------IENSKR-------------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEIN

Query:  NEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDV
         +V E  E   EAA+GS P    PPPPP R+  H +   +D N DV
Subjt:  NEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDV

Arabidopsis top hits

e value

%identity

Alignment

AT3G21810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

4.6e-41

34.75

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Query:  MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAAPS-TGRQEYRGNDLRHKLDSRHSPLQER-------------DSRGRHGPR--EYSSSWSL
        M G  ++KTKLC+L+ K G CSRP+C+FAHGNAELRR    S TGR+    +DLR +  +  S L++R             D  GR   R   + +S   
Subjt:  MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAAPS-TGRQEYRGNDLRHKLDSRHSPLQER-------------DSRGRHGPR--EYSSSWSL

Query:  ERHSDRKRRKKEHGDSRRDYSGNLRISDRNEEQDREGKTS-SASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQE
        E   D+  R+    D RRDY+G L++ +R E++  +G+       + LE QL  ++ D++M    K + E  ++ K  EVD LTSRIQELE+QL +E+ E
Subjt:  ERHSDRKRRKKEHGDSRRDYSGNLRISDRNEEQDREGKTS-SASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQE

Query:  CRRIKSKIKKFVKAHNRY-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYH---ASGPFHDLQKDNSASKKKMHAAQDT-----
        CRRI S  KKFVK +NR+        RS+ RLQ+LG+QL   +     N  D  ++IVSD E  G +   A  P ++LQ  +S S+KK +  Q T     
Subjt:  CRRIKSKIKKFVKAHNRY-------SRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYH---ASGPFHDLQKDNSASKKKMHAAQDT-----

Query:  ------------IENSKR-------------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEIN
                    +EN K+                               + E   KR R S   S  DK        V+  TSMAA   D          
Subjt:  ------------IENSKR-------------------------------ANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEIN

Query:  NEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDV
         +V E  E   EAA+GS P    PPPPP R+  H +   +D N DV
Subjt:  NEVKEPRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGGTTGGGCGCAAACTCTTCAAAACAAAGTTATGTGTTCTTTATCAAAAAGGCCACTGTTCTCGCCCAAGTTGCTCCTTCGCTCACGGGAACGCTGAACTCAGGCG
ATTTGCTGCTCCTTCTACCGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGGCATTCTCCCCTGCAGGAAAGGGATTCTAGAGGGCGCCATG
GACCTCGTGAGTATAGCTCATCTTGGTCACTTGAACGACATAGTGACCGTAAGAGAAGGAAAAAGGAACACGGGGATTCCCGTCGTGACTATTCTGGAAATTTGAGGATT
TCAGATAGGAATGAAGAACAAGATAGAGAAGGGAAAACCTCATCTGCTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGACAGATATTGAGATGGCCGAGCA
CCACAAACACCAAGCTGAGGTCTATCTGGACGAGAAAATTCAAGAAGTGGACAGTTTGACTTCTAGAATTCAGGAGCTAGAATCTCAATTATATAAAGAGAGGCAGGAGT
GTAGAAGGATCAAATCAAAAATCAAGAAGTTCGTCAAAGCACATAATCGTTACTCAAGGTCGCAAGTTCGACTTCAACAGTTGGGAGATCAGCTGGGGCCAGATGTTAAT
AAAATTGGTGCCAATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATGCATCTGGCCCTTTTCATGACCTGCAAAAAGACAATTCTGC
AAGCAAGAAGAAGATGCATGCTGCTCAAGATACTATAGAGAACTCAAAACGAGCAAATGAAAGCAGGCAGAAGAGGGGAAGGACATCTAGTAGTGTTTCTACTGCAGACA
AGGTTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCATTAACCAGCATGGCTGCCCATGCAGTCGATGAGGAAGTTGATATTGACTTGGAAATCAACAATGAAGTGAAAGAA
CCGAGGGAAAGTACTAAGGAGGCTGCGTCAGGCAGCCTGCCTTTCTTTCCCCCTCCACCACCTCCTCCAATCCGTGAATTCAACCATTCAAGGTATGCGGGTGAAGATCA
AAATGTAGATGTGGAGGTGGTTGATGATGAAAGGGAAGGTATGGACGTTGCTTTGTATTAG

mRNA sequence

Show/hide mRNA sequence

AAAAAATAAAGCTGCAAAAAAAGAGGAGAAATAAAAACCCCTCATCACTGTGTTCGTCCAAGCGGTCGGCGTTTTCCTTCAGATAGCTCACAAAGTTCAGCTCTCGCAAT
TCACAAGCCCTCGAATCTGTTCTATTCTATTATTTTTTTTTGCATATTTTCTGATTATTGGCAATCTTTATAAGCGAATTTCATCGCCTGAACTACTCCAATTCGGTTCT
ACATCTATTCTTTCTGATTCGTCGCTGCAAATACAAACGGCGATTACTGCGACTTCCAATATATACTTCAATAACTCTGTTATTGTTCATGTTCATCCATGATGGTTGGG
CGCAAACTCTTCAAAACAAAGTTATGTGTTCTTTATCAAAAAGGCCACTGTTCTCGCCCAAGTTGCTCCTTCGCTCACGGGAACGCTGAACTCAGGCGATTTGCTGCTCC
TTCTACCGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGGCATTCTCCCCTGCAGGAAAGGGATTCTAGAGGGCGCCATGGACCTCGTGAGT
ATAGCTCATCTTGGTCACTTGAACGACATAGTGACCGTAAGAGAAGGAAAAAGGAACACGGGGATTCCCGTCGTGACTATTCTGGAAATTTGAGGATTTCAGATAGGAAT
GAAGAACAAGATAGAGAAGGGAAAACCTCATCTGCTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGACAGATATTGAGATGGCCGAGCACCACAAACACCA
AGCTGAGGTCTATCTGGACGAGAAAATTCAAGAAGTGGACAGTTTGACTTCTAGAATTCAGGAGCTAGAATCTCAATTATATAAAGAGAGGCAGGAGTGTAGAAGGATCA
AATCAAAAATCAAGAAGTTCGTCAAAGCACATAATCGTTACTCAAGGTCGCAAGTTCGACTTCAACAGTTGGGAGATCAGCTGGGGCCAGATGTTAATAAAATTGGTGCC
AATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATGCATCTGGCCCTTTTCATGACCTGCAAAAAGACAATTCTGCAAGCAAGAAGAA
GATGCATGCTGCTCAAGATACTATAGAGAACTCAAAACGAGCAAATGAAAGCAGGCAGAAGAGGGGAAGGACATCTAGTAGTGTTTCTACTGCAGACAAGGTTAGGGGTC
TAGAGTCAGGTGTTGTAGTGCCATTAACCAGCATGGCTGCCCATGCAGTCGATGAGGAAGTTGATATTGACTTGGAAATCAACAATGAAGTGAAAGAACCGAGGGAAAGT
ACTAAGGAGGCTGCGTCAGGCAGCCTGCCTTTCTTTCCCCCTCCACCACCTCCTCCAATCCGTGAATTCAACCATTCAAGGTATGCGGGTGAAGATCAAAATGTAGATGT
GGAGGTGGTTGATGATGAAAGGGAAGGTATGGACGTTGCTTTGTATTAGATCCTGCTGTAGAGATTTTGATTGCTATTCTCGAATTATCTTGGTGAAGCAATTCAATGCA
CTAATTCACTTGTTTGTTGATCGTCAGCTAAGGCTAGATATATATATGTTTTCAACCCTGAAATATATATCTTATTTAACATTTAACATTTAATGTAGTGAAATTTCAAT
TTTCTTTCAAGCATGGGAAATTACTCAAAAGTTTTTACTCAATTCTATCATTGAAATTGAATTAAGA

Protein sequence

Show/hide protein sequence

MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAPSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPREYSSSWSLERHSDRKRRKKEHGDSRRDYSGNLRI
SDRNEEQDREGKTSSASRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNRYSRSQVRLQQLGDQLGPDVN
KIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDNSASKKKMHAAQDTIENSKRANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKE
PRESTKEAASGSLPFFPPPPPPPIREFNHSRYAGEDQNVDVEVVDDEREGMDVALY

Lsi11G014710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome