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Lsi11G014730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionB box-type domain-containing protein
Genome locationchr11:23292852..23293253
RNA-Seq ExpressionLsi11G014730
SyntenyLsi11G014730
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572307.1 B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia]2.9e-5379.26Show/hide
Query:  MCKGVEREETQAAVRQRRTTE--EAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSI
        MCKGV +EETQA V++RRTTE   A+GGGGDP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLPSI
Subjt:  MCKGVEREETQAAVRQRRTTE--EAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSI

Query:  VSRSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL
        VS S +  NFQNYHC SDD+ QN SQ+L+TPCLFL
Subjt:  VSRSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL

KGN43541.1 hypothetical protein Csa_020490 [Cucumis sativus]1.3e-5886.67Show/hide
Query:  MCKGVEREE-TQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL-PSI
        MCKGVE+EE TQ AVRQRRTT++   GGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL PS+
Subjt:  MCKGVEREE-TQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL-PSI

Query:  VSRSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL
        VSR     NF NYHCDSD FVQNCSQVL+TPCLFL
Subjt:  VSRSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL

XP_008455408.1 PREDICTED: B-box zinc finger protein 21 [Cucumis melo]2.3e-5884.96Show/hide
Query:  MCKGVEREETQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS
        MCKGVE+EET+A VRQR TT++    GGDPVRCELCGSRASLYCEADEAYLCGKCDKSVH+ANFLALRHVRCLLCNTCQSHTQRYLLGASMEVV+PSIVS
Subjt:  MCKGVEREETQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS

Query:  RSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL
        R     NF NYHCDSD FVQNCSQVL+TPCLFL
Subjt:  RSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL

XP_022953004.1 B-box domain protein 30 [Cucurbita moschata]2.0e-4682.88Show/hide
Query:  AEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVGTNFQNYHCDSDDFVQNC
        A+GGGGDP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLPSIVS SS+  NFQNYHC SDD+ QN 
Subjt:  AEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVGTNFQNYHCDSDDFVQNC

Query:  SQVLRTPCLFL
        SQ+L+TPCLFL
Subjt:  SQVLRTPCLFL

XP_023511647.1 B-box domain protein 30-like [Cucurbita pepo subsp. pepo]2.2e-5378.52Show/hide
Query:  MCKGVEREETQAAVRQRRTTE--EAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSI
        MCKGV +E+TQA V++RRTTE   A+GGGGDP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RY+LGASMEVVLPSI
Subjt:  MCKGVEREETQAAVRQRRTTE--EAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSI

Query:  VSRSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL
        VS SS+  NFQNYHC SDD+ QN SQ+L+TPCLFL
Subjt:  VSRSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K6V9 B box-type domain-containing protein6.4e-5986.67Show/hide
Query:  MCKGVEREE-TQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL-PSI
        MCKGVE+EE TQ AVRQRRTT++   GGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL PS+
Subjt:  MCKGVEREE-TQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL-PSI

Query:  VSRSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL
        VSR     NF NYHCDSD FVQNCSQVL+TPCLFL
Subjt:  VSRSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL

A0A1S3C0U6 B-box zinc finger protein 211.1e-5884.96Show/hide
Query:  MCKGVEREETQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS
        MCKGVE+EET+A VRQR TT++    GGDPVRCELCGSRASLYCEADEAYLCGKCDKSVH+ANFLALRHVRCLLCNTCQSHTQRYLLGASMEVV+PSIVS
Subjt:  MCKGVEREETQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS

Query:  RSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL
        R     NF NYHCDSD FVQNCSQVL+TPCLFL
Subjt:  RSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL

A0A5A7TAC0 B-box zinc finger protein 211.1e-5884.96Show/hide
Query:  MCKGVEREETQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS
        MCKGVE+EET+A VRQR TT++    GGDPVRCELCGSRASLYCEADEAYLCGKCDKSVH+ANFLALRHVRCLLCNTCQSHTQRYLLGASMEVV+PSIVS
Subjt:  MCKGVEREETQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS

Query:  RSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL
        R     NF NYHCDSD FVQNCSQVL+TPCLFL
Subjt:  RSSVGTNFQNYHCDSDDFVQNCSQVLRTPCLFL

A0A6J1GNE7 B-box domain protein 309.6e-4782.88Show/hide
Query:  AEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVGTNFQNYHCDSDDFVQNC
        A+GGGGDP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLPSIVS SS+  NFQNYHC SDD+ QN 
Subjt:  AEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVGTNFQNYHCDSDDFVQNC

Query:  SQVLRTPCLFL
        SQ+L+TPCLFL
Subjt:  SQVLRTPCLFL

A0A6J1HUR8 B-box domain protein 301.2e-4179.28Show/hide
Query:  AEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVGTNFQNYHCDSDDFVQNC
        A+GGGGDP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLPSIVS SS+  NFQN   DSD + QN 
Subjt:  AEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVGTNFQNYHCDSDDFVQNC

Query:  SQVLRTPCLFL
        SQ+L+T CLFL
Subjt:  SQVLRTPCLFL

SwissProt top hitse value%identityAlignment
O22800 Zinc finger protein CONSTANS-LIKE 145.0e-0855.1Show/hide
Query:  VRCELCGSR-ASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTC
        V CE CG R A L+C AD A LC  CD+ VHSAN L+ +HVR  +C+ C
Subjt:  VRCELCGSR-ASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTC

Q1G3I2 B-box domain protein 305.1e-2151.49Show/hide
Query:  MCKGVEREETQAAVR---QRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPS
        MC+G E+EE + +     QR  TE  +     PV CELCG  A++YCEAD A+LC KCD+ VHSANFLA RH+R ++C TC+  T+R L+G +  VVLP 
Subjt:  MCKGVEREETQAAVR---QRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPS

Query:  I
        I
Subjt:  I

Q96502 Zinc finger protein CONSTANS-LIKE 22.2e-0844.29Show/hide
Query:  EEAEGGGGDPVRCELCGSRA-SLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGA
        EE+   G     C+ C S A ++YCEAD AYLC  CD  VH+AN +A RH R  +C +C+S    +L  A
Subjt:  EEAEGGGGDPVRCELCGSRA-SLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGA

Q9LJB7 B-box zinc finger protein 323.7e-1150Show/hide
Query:  CELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG
        CELCG+ A L+C AD A+LC  CD   H++NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG

Q9LRM4 B-box domain protein 311.1e-1846.79Show/hide
Query:  MCKGVEREETQAAVRQRRTTEEAEGGG--------GDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG-ASM
        MC+G+  EE++           ++GGG          PVRCELC   AS++CEAD A+LC KCD+ VH ANFLA RHVR +LC +CQ  T+R L+G    
Subjt:  MCKGVEREETQAAVRQRRTTEEAEGGG--------GDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG-ASM

Query:  EVVLPSIVS
         VVLPS+ +
Subjt:  EVVLPSIVS

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 322.6e-1250Show/hide
Query:  CELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG
        CELCG+ A L+C AD A+LC  CD   H++NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG

AT3G21890.1 B-box type zinc finger family protein7.6e-2046.79Show/hide
Query:  MCKGVEREETQAAVRQRRTTEEAEGGG--------GDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG-ASM
        MC+G+  EE++           ++GGG          PVRCELC   AS++CEAD A+LC KCD+ VH ANFLA RHVR +LC +CQ  T+R L+G    
Subjt:  MCKGVEREETQAAVRQRRTTEEAEGGG--------GDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG-ASM

Query:  EVVLPSIVS
         VVLPS+ +
Subjt:  EVVLPSIVS

AT4G15248.1 B-box type zinc finger family protein3.6e-2251.49Show/hide
Query:  MCKGVEREETQAAVR---QRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPS
        MC+G E+EE + +     QR  TE  +     PV CELCG  A++YCEAD A+LC KCD+ VHSANFLA RH+R ++C TC+  T+R L+G +  VVLP 
Subjt:  MCKGVEREETQAAVR---QRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPS

Query:  I
        I
Subjt:  I

AT4G27310.1 B-box type zinc finger family protein4.0e-1356.86Show/hide
Query:  RCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHT
        +C+LC   A +YCE+D+A LC  CD  VH ANFL  +H RCLLC+ CQS T
Subjt:  RCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHT

AT5G54470.1 B-box type zinc finger family protein1.6e-1460.78Show/hide
Query:  RCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHT
        +CELC   A +YCE+D+A LC  CD  VH ANFL  +H+RCLLC+ CQSHT
Subjt:  RCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAAGGAGTAGAACGGGAAGAAACCCAAGCCGCCGTCCGGCAGCGGCGGACCACCGAGGAGGCGGAGGGCGGCGGAGGCGATCCAGTACGGTGCGAGCTGTGCGG
TTCGAGAGCGTCGCTGTATTGCGAAGCGGACGAGGCGTATTTGTGCGGAAAGTGCGACAAATCGGTTCACAGCGCGAATTTCTTGGCGCTGCGGCACGTTCGGTGCCTGC
TGTGCAACACGTGCCAGAGCCACACGCAGCGATATCTGTTGGGAGCGTCCATGGAGGTCGTGCTTCCGAGTATTGTGAGTCGTTCATCGGTGGGGACGAATTTCCAAAAT
TACCACTGTGATTCAGATGATTTTGTTCAGAATTGCTCCCAAGTTCTGAGAACTCCTTGTCTCTTTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAAGGAGTAGAACGGGAAGAAACCCAAGCCGCCGTCCGGCAGCGGCGGACCACCGAGGAGGCGGAGGGCGGCGGAGGCGATCCAGTACGGTGCGAGCTGTGCGG
TTCGAGAGCGTCGCTGTATTGCGAAGCGGACGAGGCGTATTTGTGCGGAAAGTGCGACAAATCGGTTCACAGCGCGAATTTCTTGGCGCTGCGGCACGTTCGGTGCCTGC
TGTGCAACACGTGCCAGAGCCACACGCAGCGATATCTGTTGGGAGCGTCCATGGAGGTCGTGCTTCCGAGTATTGTGAGTCGTTCATCGGTGGGGACGAATTTCCAAAAT
TACCACTGTGATTCAGATGATTTTGTTCAGAATTGCTCCCAAGTTCTGAGAACTCCTTGTCTCTTTCTGTAA
Protein sequenceShow/hide protein sequence
MCKGVEREETQAAVRQRRTTEEAEGGGGDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVGTNFQN
YHCDSDDFVQNCSQVLRTPCLFL