; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G014830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription factor bHLH117
Genome locationchr11:23334991..23335956
RNA-Seq ExpressionLsi11G014830
SyntenyLsi11G014830
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040270.1 transcription factor bHLH117 [Cucumis melo var. makuwa]2.1e-14284.21Show/hide
Query:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME
        MESS GDDASS+VW+DACFNAMFS VS QSFLA G+ S       F GGYIADALTFPD TTSFYPQ S+NF AECT SSDGPFFKLPKSEPM+VY++ E
Subjt:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME

Query:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPY-QYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS
        T+E AFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSM NPLQMVEP +VRGCEGFQNFF+PY QYK +SDLITTSAT SPTVQIPRS  ARQRRQKLS
Subjt:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPY-QYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS

Query:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL
        DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCES +S+Y SSN YITGVF GLERLNRNQLLQVLVNSPVAQT+LCSQSCCVFSAEQL
Subjt:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL

Query:  GHIQKIAEKRVLLQQMSTFRPKP
        G IQKIAEKRVL     TF PKP
Subjt:  GHIQKIAEKRVLLQQMSTFRPKP

KAG6572315.1 Transcription factor basic helix-loop-helix 117, partial [Cucurbita argyrosperma subsp. sororia]2.7e-15086.29Show/hide
Query:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME
        ME+SAGDDASSTVW+DACF+AMFSGVSLQSFLAGGSQSHTLLP+LF G Y+AD+LTFPDG TS YPQ SSNFVAE TASSDGPFFKLPKSEPM+VY+  E
Subjt:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME

Query:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSD
        T+E+ F+ HDSTSFPHLPDLRSLEQCSSSFNKRARVDS++NPLQMVEP +VR CEGFQNFF+PY+YK + DL TTSA VSP VQIPRSALARQRRQKLSD
Subjt:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSD

Query:  KTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQLGH
        KTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP ES IS+YS+N YITG+F GLERLNRNQLLQVLVNSPVAQT+LCSQSCCVFSAEQ G 
Subjt:  KTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQLGH

Query:  IQKIAEKRVLLQQMSTFRPKP
        IQKIAEKRVLLQQMSTFRPKP
Subjt:  IQKIAEKRVLLQQMSTFRPKP

XP_008455394.1 PREDICTED: transcription factor bHLH117 [Cucumis melo]5.2e-14183.9Show/hide
Query:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME
        MESS GDDASS+VW+DACFNAMFS VS QSFLA G+ S       F GGYIADALTFPD TTSFYPQ S+NF AECT SSDGPFFKLPKSEPM+VY++ E
Subjt:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME

Query:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPY-QYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS
        T+E AFVLHDSTSFPHLPDLRSLEQ SSSFNKRARVDSM NPLQMVEP +VRGCEGFQNFF+PY QYK +SDLITTSAT SPTVQIPRS  ARQRRQKLS
Subjt:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPY-QYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS

Query:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL
        DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCES +S+Y SSN YITGVF GLERLNRNQLLQVLVNSPVAQT+LCSQSCCVFSAEQL
Subjt:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL

Query:  GHIQKIAEKRVLLQQMSTFRPKP
        G IQKIAEKRVL     TF PKP
Subjt:  GHIQKIAEKRVLLQQMSTFRPKP

XP_023554551.1 transcription factor bHLH117-like [Cucurbita pepo subsp. pepo]1.1e-15186.92Show/hide
Query:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME
        ME+SAGDDASSTVW+DACF+AMFSGVSLQSFLAGGSQSHTLLP+LF G Y+AD+LTFPDG TS YPQ SSNFVAE TASSDGPFFKLPKSEPM+VY+  E
Subjt:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME

Query:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSD
        T+E++F+ HDSTSFPHLPDLRSLEQCSSSFNKRARVDS++NPLQMVEP +VR CEGFQNFF+PY+YK + DL TTSA VSP VQIPRSALARQRRQKLSD
Subjt:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSD

Query:  KTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQLGH
        KTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMP ES IS+YS+NHYITG+F GLERLNRNQLLQVLVNSPVAQT+LCSQSCCVFSAEQLG 
Subjt:  KTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQLGH

Query:  IQKIAEKRVLLQQMSTFRPKP
        IQKIAEKRVLLQQMSTFRPKP
Subjt:  IQKIAEKRVLLQQMSTFRPKP

XP_038889062.1 transcription factor bHLH117 [Benincasa hispida]7.6e-16192.24Show/hide
Query:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME
        MESSAGDDASSTVW+D CFNAMFSGVSLQSFLAGGSQSHT LP+LF GGY ADAL FPDGTTSFYPQ SSNFVAECTASSDG F KLPKSEPMNVY N E
Subjt:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME

Query:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVD-SMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS
        TEETAF LHDS SFPHLPDLRSLEQCSSSFNKRARVD SMLNP QMVEP +VRGCEGFQ FFMPYQYKP+SDLITTSATVSPTVQIPRSALARQRRQKLS
Subjt:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVD-SMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS

Query:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQLG
        DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQL+ALQSMPCES ISTYSSNHYITGVF GLERLNRNQLLQVLVNSPVAQT+LCSQSCCVFSAEQLG
Subjt:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQLG

Query:  HIQKIAEKRVLLQQMSTFRPKP
         IQKIAEKRVLLQQMSTFRPKP
Subjt:  HIQKIAEKRVLLQQMSTFRPKP

TrEMBL top hitse value%identityAlignment
A0A0A0K6W7 BHLH domain-containing protein2.3e-13982.35Show/hide
Query:  MESSAGDDASSTVW-NDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNM
        ME+S GDDASS+VW +DACFNAMFS VS QSFLA G+ S       F GGYIADALTFP+ TTSFYPQ ++NF AECT SSDGPFFKLPKSEPM+VY++ 
Subjt:  MESSAGDDASSTVW-NDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNM

Query:  ETEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS
        ET+E AFVLHDSTSFPHLPDLRSLEQCSSS NKRARVDSM NPLQM+EP +VRGCEGFQ+FF+PYQYK +SDLIT SAT SPTVQIPRS  ARQRRQKLS
Subjt:  ETEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS

Query:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL
        DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCES IS+Y SSN+YITGVF GLERLNRNQLLQVLVNSPVAQT+LCSQSCCVFSAEQL
Subjt:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL

Query:  GHIQKIAEKRVLLQQMSTFRPKP
        G IQKIAEKRVL     TF PKP
Subjt:  GHIQKIAEKRVLLQQMSTFRPKP

A0A1S3C0Y6 transcription factor bHLH1172.5e-14183.9Show/hide
Query:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME
        MESS GDDASS+VW+DACFNAMFS VS QSFLA G+ S       F GGYIADALTFPD TTSFYPQ S+NF AECT SSDGPFFKLPKSEPM+VY++ E
Subjt:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME

Query:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPY-QYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS
        T+E AFVLHDSTSFPHLPDLRSLEQ SSSFNKRARVDSM NPLQMVEP +VRGCEGFQNFF+PY QYK +SDLITTSAT SPTVQIPRS  ARQRRQKLS
Subjt:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPY-QYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS

Query:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL
        DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCES +S+Y SSN YITGVF GLERLNRNQLLQVLVNSPVAQT+LCSQSCCVFSAEQL
Subjt:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL

Query:  GHIQKIAEKRVLLQQMSTFRPKP
        G IQKIAEKRVL     TF PKP
Subjt:  GHIQKIAEKRVLLQQMSTFRPKP

A0A5A7TAD0 Transcription factor bHLH1171.0e-14284.21Show/hide
Query:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME
        MESS GDDASS+VW+DACFNAMFS VS QSFLA G+ S       F GGYIADALTFPD TTSFYPQ S+NF AECT SSDGPFFKLPKSEPM+VY++ E
Subjt:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNME

Query:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPY-QYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS
        T+E AFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSM NPLQMVEP +VRGCEGFQNFF+PY QYK +SDLITTSAT SPTVQIPRS  ARQRRQKLS
Subjt:  TEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPY-QYKPTSDLITTSATVSPTVQIPRSALARQRRQKLS

Query:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL
        DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCES +S+Y SSN YITGVF GLERLNRNQLLQVLVNSPVAQT+LCSQSCCVFSAEQL
Subjt:  DKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTY-SSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL

Query:  GHIQKIAEKRVLLQQMSTFRPKP
        G IQKIAEKRVL     TF PKP
Subjt:  GHIQKIAEKRVLLQQMSTFRPKP

A0A6J1C4H2 transcription factor bHLH1171.1e-12072.97Show/hide
Query:  MESSAGDDASS-----------TVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPK
        MESSAGDD S+            VW+DACFNAMFSGVSLQSFLA  + +H  LP+LF GGY+ADA++ PD +TS YP  SSNFV+E TASSD  FFKLPK
Subjt:  MESSAGDDASS-----------TVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPK

Query:  SEPMNVYKNMETEETAFVLHDSTSFPHLPDLRSLEQ---------CSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVS
        +EPMN     E  E+ FV HDSTSFPHLPDLRSLEQ          SSSFNKRARVDS LNPLQ +EP +VRGCE FQNF +PYQYKP  D  TTSA V+
Subjt:  SEPMNVYKNMETEETAFVLHDSTSFPHLPDLRSLEQ---------CSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVS

Query:  PTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYI---TGVFCGLERLNRNQLLQVLVN
        P VQ PRSALARQRRQKLSD+TRCLQKLLPWDKKMDIATMLEEA KYVKFLQAQLLALQSMPCES IST S+N+     +G F GLERLNRNQLLQVLVN
Subjt:  PTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYI---TGVFCGLERLNRNQLLQVLVN

Query:  SPVAQTVLCSQSCCVFSAEQLGHIQKIAEKRVLLQQMSTFRPKP
        SPVAQT+LCSQS CVFSAEQLG IQKIAEKR LLQQMSTF PKP
Subjt:  SPVAQTVLCSQSCCVFSAEQLGHIQKIAEKRVLLQQMSTFRPKP

A0A6J1EXY4 transcription factor bHLH117-like isoform X13.0e-11874.61Show/hide
Query:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSH--TLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKN
        +ESSAGDD S+ VW+DACFNAMFSGVSLQSFLAGG+Q+H   LLP+LF GGYI+DALTFPD +TS YPQ SSNFVAE           +  SEPMNVY  
Subjt:  MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSH--TLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKN

Query:  METEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKL
           E+TAFV H STSFPHLPDLRSL QCSSSFNKRARVDS+ NPLQMVEP ++R CE                 +++SA VS TVQIPRSALARQRRQKL
Subjt:  METEETAFVLHDSTSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKL

Query:  SDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL
        SDKTRCLQKLLPWDKKMDI+TMLE A KYVKFLQAQLLALQSMPCES IST +SNH+I+GVF GLERL+RNQLLQVLVNSPVAQT+LCSQSCCVFSAEQL
Subjt:  SDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL

Query:  GHIQKIAEKRVLLQQMSTFRPKP
        G IQKIAEKRVLLQQ+STFR KP
Subjt:  GHIQKIAEKRVLLQQMSTFRPKP

SwissProt top hitse value%identityAlignment
A0A0P0WQ90 Transcription factor LATE FLOWERING1.2e-0742.47Show/hide
Query:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITG
        P++  AR RR+++S++ R LQ+L+P   KMD ATML+EA  Y+KFL++QL AL+++   +       + Y TG
Subjt:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITG

Q7XHI9 Transcription factor bHLH844.6e-0752.73Show/hide
Query:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
        P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA +YVKFLQ Q+  L S
Subjt:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS

Q8LEG1 Transcription factor RSL31.2e-0731.84Show/hide
Query:  SSDGPFFKLPKSEPM------NVYKNMETEETAFVLHDSTSFPH-LPDLRSLEQCSSSFN----------KRARVDSMLNPLQMVEPTVVRGCEGFQNFF
        SSD   F LP   P       N+   +++ + +  L +++S    L D+ +L + +S+ +          K+ RV S  N +       V G +   N  
Subjt:  SSDGPFFKLPKSEPM------NVYKNMETEETAFVLHDSTSFPH-LPDLRSLEQCSSSFN----------KRARVDSMLNPLQMVEPTVVRGCEGFQNFF

Query:  MPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
           +   TS    T AT   T   P+S  AR+RR+K++++ + LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Subjt:  MPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS

Q8S3D2 Transcription factor bHLH875.4e-0851.79Show/hide
Query:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM
        P++  ARQRR+++S+K R LQ L+P   KMD A+ML+EA  Y+KFL+AQ+ AL+++
Subjt:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM

Q9LRJ4 Transcription factor bHLH1172.8e-2037.17Show/hide
Query:  STSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATV---SPTVQIPRSALARQRRQKLSDKTRCLQK
        +T F HLPDL+S++                    + EPT ++    F +   P        L +TS++    SPT       +   +R+K+SDK R L+K
Subjt:  STSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATV---SPTVQIPRSALARQRRQKLSDKTRCLQK

Query:  LLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL
        L+PW++KM++A  LEE+ KY+KFLQ+Q+ +L+ MP ES  +T        G    L+ L R Q+LQVL NSP ++ VL S+  CVFS EQL
Subjt:  LLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL

Arabidopsis top hitse value%identityAlignment
AT1G27740.1 root hair defective 6-like 48.5e-0931.84Show/hide
Query:  SSDGPFFKLPKSEPM------NVYKNMETEETAFVLHDSTSFPH-LPDLRSLEQCSSSFN----------KRARVDSMLNPLQMVEPTVVRGCEGFQNFF
        SSD   F LP   P       N+   +++ + +  L +++S    L D+ +L + +S+ +          K+ RV S  N +       V G +   N  
Subjt:  SSDGPFFKLPKSEPM------NVYKNMETEETAFVLHDSTSFPH-LPDLRSLEQCSSSFN----------KRARVDSMLNPLQMVEPTVVRGCEGFQNFF

Query:  MPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
           +   TS    T AT   T   P+S  AR+RR+K++++ + LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Subjt:  MPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS

AT2G14760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.2e-0852.73Show/hide
Query:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
        P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA +YVKFLQ Q+  L S
Subjt:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS

AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.8e-0951.79Show/hide
Query:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM
        P++  ARQRR+++S+K R LQ L+P   KMD A+ML+EA  Y+KFL+AQ+ AL+++
Subjt:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM

AT3G22100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.0e-2137.17Show/hide
Query:  STSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATV---SPTVQIPRSALARQRRQKLSDKTRCLQK
        +T F HLPDL+S++                    + EPT ++    F +   P        L +TS++    SPT       +   +R+K+SDK R L+K
Subjt:  STSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATV---SPTVQIPRSALARQRRQKLSDKTRCLQK

Query:  LLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL
        L+PW++KM++A  LEE+ KY+KFLQ+Q+ +L+ MP ES  +T        G    L+ L R Q+LQVL NSP ++ VL S+  CVFS EQL
Subjt:  LLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQL

AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 24.2e-0852.73Show/hide
Query:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
        P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Subjt:  PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTTCTGCCGGCGACGATGCTTCCTCCACTGTTTGGAATGATGCTTGCTTCAACGCTATGTTTTCCGGCGTCAGTCTCCAGTCATTTCTCGCCGGTGGTAGTCA
GAGTCACACATTGTTGCCGACTCTGTTCGAAGGAGGCTACATTGCCGATGCTCTTACATTCCCTGACGGTACGACGTCGTTCTATCCTCAAGGGAGCTCTAACTTCGTCG
CTGAATGTACCGCTTCTTCGGATGGCCCTTTCTTCAAGTTGCCTAAATCCGAGCCGATGAATGTGTATAAAAACATGGAGACTGAAGAAACGGCGTTCGTTCTTCATGAT
TCGACGTCGTTTCCTCACTTGCCGGATCTCCGTTCGTTGGAGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTTGATTCTATGTTGAATCCGTTGCAGATGGTGGA
GCCGACAGTGGTGCGAGGGTGTGAGGGTTTTCAGAACTTTTTTATGCCGTACCAGTACAAACCTACGTCGGATTTAATAACTACTTCTGCTACGGTGTCTCCCACTGTTC
AAATCCCTCGCAGCGCGTTGGCTCGACAGCGTCGTCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAACTACTGCCGTGGGACAAAAAGATGGATATCGCAACAATG
CTTGAAGAAGCGTGTAAATACGTCAAGTTCCTTCAGGCGCAACTCCTCGCACTTCAATCCATGCCCTGTGAATCCACCATTTCTACTTATTCGAGTAATCATTACATTAC
TGGTGTGTTTTGTGGATTAGAGAGGCTGAATCGAAACCAACTGTTGCAAGTTTTGGTTAACTCGCCGGTGGCTCAGACAGTGCTTTGTTCGCAGAGTTGTTGCGTTTTCT
CGGCGGAACAGTTGGGACATATCCAGAAGATAGCAGAGAAAAGAGTTCTACTGCAGCAAATGTCGACATTCCGTCCCAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGTTCTGCCGGCGACGATGCTTCCTCCACTGTTTGGAATGATGCTTGCTTCAACGCTATGTTTTCCGGCGTCAGTCTCCAGTCATTTCTCGCCGGTGGTAGTCA
GAGTCACACATTGTTGCCGACTCTGTTCGAAGGAGGCTACATTGCCGATGCTCTTACATTCCCTGACGGTACGACGTCGTTCTATCCTCAAGGGAGCTCTAACTTCGTCG
CTGAATGTACCGCTTCTTCGGATGGCCCTTTCTTCAAGTTGCCTAAATCCGAGCCGATGAATGTGTATAAAAACATGGAGACTGAAGAAACGGCGTTCGTTCTTCATGAT
TCGACGTCGTTTCCTCACTTGCCGGATCTCCGTTCGTTGGAGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTTGATTCTATGTTGAATCCGTTGCAGATGGTGGA
GCCGACAGTGGTGCGAGGGTGTGAGGGTTTTCAGAACTTTTTTATGCCGTACCAGTACAAACCTACGTCGGATTTAATAACTACTTCTGCTACGGTGTCTCCCACTGTTC
AAATCCCTCGCAGCGCGTTGGCTCGACAGCGTCGTCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAACTACTGCCGTGGGACAAAAAGATGGATATCGCAACAATG
CTTGAAGAAGCGTGTAAATACGTCAAGTTCCTTCAGGCGCAACTCCTCGCACTTCAATCCATGCCCTGTGAATCCACCATTTCTACTTATTCGAGTAATCATTACATTAC
TGGTGTGTTTTGTGGATTAGAGAGGCTGAATCGAAACCAACTGTTGCAAGTTTTGGTTAACTCGCCGGTGGCTCAGACAGTGCTTTGTTCGCAGAGTTGTTGCGTTTTCT
CGGCGGAACAGTTGGGACATATCCAGAAGATAGCAGAGAAAAGAGTTCTACTGCAGCAAATGTCGACATTCCGTCCCAAACCCTAG
Protein sequenceShow/hide protein sequence
MESSAGDDASSTVWNDACFNAMFSGVSLQSFLAGGSQSHTLLPTLFEGGYIADALTFPDGTTSFYPQGSSNFVAECTASSDGPFFKLPKSEPMNVYKNMETEETAFVLHD
STSFPHLPDLRSLEQCSSSFNKRARVDSMLNPLQMVEPTVVRGCEGFQNFFMPYQYKPTSDLITTSATVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATM
LEEACKYVKFLQAQLLALQSMPCESTISTYSSNHYITGVFCGLERLNRNQLLQVLVNSPVAQTVLCSQSCCVFSAEQLGHIQKIAEKRVLLQQMSTFRPKP