; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G014870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr11:23362601..23364126
RNA-Seq ExpressionLsi11G014870
SyntenyLsi11G014870
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572313.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]3.0e-8359.08Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD IT+VAVLGACEKI     G +                                                       GIHGRGKEAIS+FNEMTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF
        ISPDEGVLTSVLSACSHS                                    GLLNEAYELVKR+EVEPSADIWA LLS+CRLH+NV L EI AQNIF
Subjt:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF

Query:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ
        RTNP+RVSSY CLSNIYA MKQWTAVEKVR+T+R  GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIS R KE+G+KPDTS +LYDVNEEQ
Subjt:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ

Query:  KRR
        K +
Subjt:  KRR

XP_022135920.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X2 [Momordica charantia]1.9e-8564.79Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD ITIVAVLGACEKI     G +                                                       GIHGRGKEAISIFN+MTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKR
        I PDEG+LTSVLSACSHSGLLNE YEL+K +EVEP A+IWA LLS+CRLH+NVEL EI AQNIFRTNP+RVSSY CLSNIYA  KQWT VEKVRAT+R+ 
Subjt:  ISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKR

Query:  GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQKRR
        GLKKPAGYSLIELDSQVHMFFVGD+SHQQTKDIYAKLKDIS R KEEG+KPDTS VLYDV+EEQK +
Subjt:  GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQKRR

XP_022968999.1 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucurbita maxima]8.8e-8359.08Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD IT+VAVLGACEKI     G +                                                       GIHGRGKEAISIFNEMTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF
        ISPDEGVLTSVLSACSHS                                    GLLNEAYELVKR+EV+PSADIWA LLS+CRLH+NV L EI AQNIF
Subjt:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF

Query:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ
        RTNP+RVSSY CLSNIYA MKQWTAVEKVR T+R  GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIS R KE+G+KPDTS +LYDVNEEQ
Subjt:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ

Query:  KRR
        K +
Subjt:  KRR

XP_023554404.1 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita pepo subsp. pepo]1.5e-8258.75Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD IT+VAVLGACEKI     G +                                                       GIHGRGKEAIS+FNEMTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF
        ISPDEGVLTSVLSACSHS                                    GLLNEAYELVKR+EVEPSADIWA LLS+CRLH+NV L EI AQNIF
Subjt:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF

Query:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ
        RTNP+RVSSY CLSNIYA MKQWTAVEKVR T+R  GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIS R KE+G+KPDTS +LYDV+EEQ
Subjt:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ

Query:  KRR
        K +
Subjt:  KRR

XP_038887372.1 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benincasa hispida]1.0e-8661.06Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD ITIVAVLGACEKI     G +                                                       GIHG+GKEAISIF+EMTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF
        ISPD GVLTSVLSACSHS                                    GLLNEAYELVKR+EVEPSADIWATLLS+CRLH+NVEL EI AQNIF
Subjt:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF

Query:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ
        RTNPS+VSSY CLSNIYA MKQWTAVEKVRAT+RKRGLKKPAGYSLIELDSQ+HMFFVGDKSHQ+TKDIYAKLKDIS R KEEGYKPDTSPVLYDVNEEQ
Subjt:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ

Query:  KRR
        K +
Subjt:  KRR

TrEMBL top hitse value%identityAlignment
A0A4S4EV31 DYW_deaminase domain-containing protein1.4e-6255.16Show/hide
Query:  GIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATLL
        G+HG+G+EA+ IFN+M  N I+PDEGV TSVL+ACSH+GL                                    L+EA+E +K +E++P++DIWA LL
Subjt:  GIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATLL

Query:  SSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRF
        S+CRLH+NVEL E+ AQ +F  NP RVSSY CLSN+YA  K+W  VE+VRA VR++GLKKP G+S IELD  VH F VGDKSHQQ  DIYAKLK++S R 
Subjt:  SSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRF

Query:  KEEGYKPDTSPVLYDVNEEQKRR
        KE GYKPDTS VLYDV EE K +
Subjt:  KEEGYKPDTSPVLYDVNEEQKRR

A0A6J1C2E2 pentatricopeptide repeat-containing protein At3g12770-like isoform X29.2e-8664.79Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD ITIVAVLGACEKI     G +                                                       GIHGRGKEAISIFN+MTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKR
        I PDEG+LTSVLSACSHSGLLNE YEL+K +EVEP A+IWA LLS+CRLH+NVEL EI AQNIFRTNP+RVSSY CLSNIYA  KQWT VEKVRAT+R+ 
Subjt:  ISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKR

Query:  GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQKRR
        GLKKPAGYSLIELDSQVHMFFVGD+SHQQTKDIYAKLKDIS R KEEG+KPDTS VLYDV+EEQK +
Subjt:  GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQKRR

A0A6J1C2U5 pentatricopeptide repeat-containing protein At3g12770-like isoform X12.6e-8057.1Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD ITIVAVLGACEKI     G +                                                       GIHGRGKEAISIFN+MTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF
        I PDEG+LTSVLSACSHS                                    GLLNE YEL+K +EVEP A+IWA LLS+CRLH+NVEL EI AQNIF
Subjt:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF

Query:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ
        RTNP+RVSSY CLSNIYA  KQWT VEKVRAT+R+ GLKKPAGYSLIELDSQVHMFFVGD+SHQQTKDIYAKLKDIS R KEEG+KPDTS VLYDV+EEQ
Subjt:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ

Query:  KRR
        K +
Subjt:  KRR

A0A6J1GMH0 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial1.2e-8258.42Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD IT+VAVLGACEKI     G +                                                       GIHGRGKEAIS+FNEMTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF
        ISPDEGVLTSVLSACSHS                                    GLLNEAYELVKR+EVEPSADIWA LLS+CRLH+N+ L EI AQNIF
Subjt:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF

Query:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ
        RTNP+RVSSY CLSNIYA MKQWTAVEKVR T+R  GLKKPAGYS IELDSQVHMFFVGDKSHQQTKDIYAKLKDIS R KE+G+KPDTS +LYDVNEEQ
Subjt:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ

Query:  KRR
        K +
Subjt:  KRR

A0A6J1I1A3 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like4.3e-8359.08Show/hide
Query:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND
        APD IT+VAVLGACEKI     G +                                                       GIHGRGKEAISIFNEMTAN 
Subjt:  APDAITIVAVLGACEKIQPCNLGTN-------------------------------------------------------GIHGRGKEAISIFNEMTAND

Query:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF
        ISPDEGVLTSVLSACSHS                                    GLLNEAYELVKR+EV+PSADIWA LLS+CRLH+NV L EI AQNIF
Subjt:  ISPDEGVLTSVLSACSHS------------------------------------GLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELVEICAQNIF

Query:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ
        RTNP+RVSSY CLSNIYA MKQWTAVEKVR T+R  GLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIS R KE+G+KPDTS +LYDVNEEQ
Subjt:  RTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPVLYDVNEEQ

Query:  KRR
        K +
Subjt:  KRR

SwissProt top hitse value%identityAlignment
Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic4.9e-3637.05Show/hide
Query:  TFPIPSEKMLWAVAPDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTAN-DISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWA
        +F + S      + PD IT V +L AC      +LG +           IF  MT +  ++P       ++    HSGL  EA E++  +E+EP   IW 
Subjt:  TFPIPSEKMLWAVAPDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTAN-DISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWA

Query:  TLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIS
        +LL +C++H NVEL E  A+N+ +  P    SY  LSNIYA+  +W  V K RA +  +G+KK  G S IE+DS VH F +GDK H + ++IY  L+++ 
Subjt:  TLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIS

Query:  TRFKEEGYKPDTSPVLYDVNEEQK
           ++ G+ PDTS VL ++ EE K
Subjt:  TRFKEEGYKPDTSPVLYDVNEEQK

Q9LW32 Pentatricopeptide repeat-containing protein At3g26782, mitochondrial5.8e-3735.75Show/hide
Query:  GIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATLL
        G+HG   +A+ +F  M  + + P+     SVL+ACSH+GL                                    L +AY+L++R++++P + IW++LL
Subjt:  GIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATLL

Query:  SSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRF
        ++CR+H+NVEL EI    +F  + S    Y  LS+IYA   +W  VE+VR  ++ RGL KP G+SL+EL+ +VH+F +GD+ H Q + IY  L +++ + 
Subjt:  SSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRF

Query:  KEEGYKPDTSPVLYDVNEEQK
         E GY  +TS V +DV+EE+K
Subjt:  KEEGYKPDTSPVLYDVNEEQK

Q9LW63 Putative pentatricopeptide repeat-containing protein At3g233305.5e-3534.98Show/hide
Query:  NGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATL
        + +HG G EA+S+F EM    + P++    +VL+ACSH GL                                    L EAY  + ++ VEP+  +W+TL
Subjt:  NGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATL

Query:  LSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTR
        LSSC +H+N+EL E  A+ IF  +   + +Y  + N+YA+  +W  + K+R  +RK+GL+K    S IE+ ++ H F  GD+SH     I   LK +  +
Subjt:  LSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTR

Query:  FKEEGYKPDTSPVLYDVNEEQKR
         ++EGY  DTS VL+DV+EE KR
Subjt:  FKEEGYKPDTSPVLYDVNEEQKR

Q9SY02 Pentatricopeptide repeat-containing protein At4g027501.9e-3536.65Show/hide
Query:  HGRGKEAISIFNEMTANDISPDEGVLTSVLSACSH------------------------------------SGLLNEAYELVKRVEVEPSADIWATLLSS
        HG G+ A+  F  M    + PD+  + +VLSACSH                                    +GLL +A+ L+K +  EP A IW TLL +
Subjt:  HGRGKEAISIFNEMTANDISPDEGVLTSVLSACSH------------------------------------SGLLNEAYELVKRVEVEPSADIWATLLSS

Query:  CRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKE
         R+H N EL E  A  IF   P     Y  LSN+YA+  +W  V K+R  +R +G+KK  GYS IE+ ++ H F VGD+ H +  +I+A L+++  R K+
Subjt:  CRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKE

Query:  EGYKPDTSPVLYDVNEEQKRR
         GY   TS VL+DV EE+K R
Subjt:  EGYKPDTSPVLYDVNEEQKRR

Q9ZVF4 Pentatricopeptide repeat-containing protein At2g01510, mitochondrial9.3e-3537.32Show/hide
Query:  PDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELV
        P+ +T + VL AC           G+   GK   S+  +    ++ P +     ++     SGLL EAYE +K++ VEP   IW  LL +C +H+++ L 
Subjt:  PDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELV

Query:  EICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPV
        +  A  +  T P   S +  LSNIYA   +W  V+KVR+ +RK G KK A YS +E + ++H F  GDKSH Q+K IY KL +I  + ++ GY PDT  V
Subjt:  EICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPV

Query:  LYDVNEEQK
         +DV  E+K
Subjt:  LYDVNEEQK

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.5e-3737.05Show/hide
Query:  TFPIPSEKMLWAVAPDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTAN-DISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWA
        +F + S      + PD IT V +L AC      +LG +           IF  MT +  ++P       ++    HSGL  EA E++  +E+EP   IW 
Subjt:  TFPIPSEKMLWAVAPDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTAN-DISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWA

Query:  TLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIS
        +LL +C++H NVEL E  A+N+ +  P    SY  LSNIYA+  +W  V K RA +  +G+KK  G S IE+DS VH F +GDK H + ++IY  L+++ 
Subjt:  TLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIS

Query:  TRFKEEGYKPDTSPVLYDVNEEQK
           ++ G+ PDTS VL ++ EE K
Subjt:  TRFKEEGYKPDTSPVLYDVNEEQK

AT2G01510.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.6e-3637.32Show/hide
Query:  PDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELV
        P+ +T + VL AC           G+   GK   S+  +    ++ P +     ++     SGLL EAYE +K++ VEP   IW  LL +C +H+++ L 
Subjt:  PDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGLLNEAYELVKRVEVEPSADIWATLLSSCRLHQNVELV

Query:  EICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPV
        +  A  +  T P   S +  LSNIYA   +W  V+KVR+ +RK G KK A YS +E + ++H F  GDKSH Q+K IY KL +I  + ++ GY PDT  V
Subjt:  EICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKEEGYKPDTSPV

Query:  LYDVNEEQK
         +DV  E+K
Subjt:  LYDVNEEQK

AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.9e-3634.98Show/hide
Query:  NGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATL
        + +HG G EA+S+F EM    + P++    +VL+ACSH GL                                    L EAY  + ++ VEP+  +W+TL
Subjt:  NGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATL

Query:  LSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTR
        LSSC +H+N+EL E  A+ IF  +   + +Y  + N+YA+  +W  + K+R  +RK+GL+K    S IE+ ++ H F  GD+SH     I   LK +  +
Subjt:  LSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTR

Query:  FKEEGYKPDTSPVLYDVNEEQKR
         ++EGY  DTS VL+DV+EE KR
Subjt:  FKEEGYKPDTSPVLYDVNEEQKR

AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.1e-3835.75Show/hide
Query:  GIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATLL
        G+HG   +A+ +F  M  + + P+     SVL+ACSH+GL                                    L +AY+L++R++++P + IW++LL
Subjt:  GIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGL------------------------------------LNEAYELVKRVEVEPSADIWATLL

Query:  SSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRF
        ++CR+H+NVEL EI    +F  + S    Y  LS+IYA   +W  VE+VR  ++ RGL KP G+SL+EL+ +VH+F +GD+ H Q + IY  L +++ + 
Subjt:  SSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRF

Query:  KEEGYKPDTSPVLYDVNEEQK
         E GY  +TS V +DV+EE+K
Subjt:  KEEGYKPDTSPVLYDVNEEQK

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-3636.65Show/hide
Query:  HGRGKEAISIFNEMTANDISPDEGVLTSVLSACSH------------------------------------SGLLNEAYELVKRVEVEPSADIWATLLSS
        HG G+ A+  F  M    + PD+  + +VLSACSH                                    +GLL +A+ L+K +  EP A IW TLL +
Subjt:  HGRGKEAISIFNEMTANDISPDEGVLTSVLSACSH------------------------------------SGLLNEAYELVKRVEVEPSADIWATLLSS

Query:  CRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKE
         R+H N EL E  A  IF   P     Y  LSN+YA+  +W  V K+R  +R +G+KK  GYS IE+ ++ H F VGD+ H +  +I+A L+++  R K+
Subjt:  CRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDISTRFKE

Query:  EGYKPDTSPVLYDVNEEQKRR
         GY   TS VL+DV EE+K R
Subjt:  EGYKPDTSPVLYDVNEEQKRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGATGGAAGCGTCGCATGCATATCTTTGCAACAACAATATCAACATATTATGGAGACGTTTCCAATTCCTTCAGAGAAAATGCTTTGGGCAGTCGCTCCGGATGC
GATAACTATCGTGGCTGTCCTTGGTGCTTGCGAAAAGATTCAGCCTTGCAATCTGGGAACTAATGGAATTCATGGGCGGGGGAAAGAGGCTATATCCATTTTCAATGAAA
TGACGGCAAATGACATTAGTCCAGACGAGGGTGTTCTCACTTCTGTTCTATCAGCATGTAGCCATTCAGGCCTACTGAATGAAGCATATGAACTGGTAAAGCGTGTGGAA
GTGGAACCATCTGCTGATATATGGGCCACACTCCTTTCTTCTTGCAGGCTTCATCAAAATGTTGAGTTGGTAGAAATTTGTGCTCAAAATATTTTCAGAACAAATCCATC
AAGGGTTAGTAGCTACACTTGTCTTTCCAATATCTATGCTACTATGAAACAATGGACTGCTGTGGAAAAGGTGAGAGCTACAGTGAGAAAACGTGGATTGAAAAAACCAG
CGGGCTATAGTTTAATTGAGCTTGATAGCCAGGTTCATATGTTCTTTGTTGGAGACAAGTCACACCAACAGACAAAAGATATATATGCCAAACTGAAGGATATAAGTACG
CGATTCAAGGAGGAAGGGTACAAGCCCGATACCAGTCCAGTGTTATATGATGTAAATGAAGAACAAAAGAGAAGATGCTTTGGGACAATAGTGAGCGATTGGCAATTGCT
TTTGCTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGATGGAAGCGTCGCATGCATATCTTTGCAACAACAATATCAACATATTATGGAGACGTTTCCAATTCCTTCAGAGAAAATGCTTTGGGCAGTCGCTCCGGATGC
GATAACTATCGTGGCTGTCCTTGGTGCTTGCGAAAAGATTCAGCCTTGCAATCTGGGAACTAATGGAATTCATGGGCGGGGGAAAGAGGCTATATCCATTTTCAATGAAA
TGACGGCAAATGACATTAGTCCAGACGAGGGTGTTCTCACTTCTGTTCTATCAGCATGTAGCCATTCAGGCCTACTGAATGAAGCATATGAACTGGTAAAGCGTGTGGAA
GTGGAACCATCTGCTGATATATGGGCCACACTCCTTTCTTCTTGCAGGCTTCATCAAAATGTTGAGTTGGTAGAAATTTGTGCTCAAAATATTTTCAGAACAAATCCATC
AAGGGTTAGTAGCTACACTTGTCTTTCCAATATCTATGCTACTATGAAACAATGGACTGCTGTGGAAAAGGTGAGAGCTACAGTGAGAAAACGTGGATTGAAAAAACCAG
CGGGCTATAGTTTAATTGAGCTTGATAGCCAGGTTCATATGTTCTTTGTTGGAGACAAGTCACACCAACAGACAAAAGATATATATGCCAAACTGAAGGATATAAGTACG
CGATTCAAGGAGGAAGGGTACAAGCCCGATACCAGTCCAGTGTTATATGATGTAAATGAAGAACAAAAGAGAAGATGCTTTGGGACAATAGTGAGCGATTGGCAATTGCT
TTTGCTCTTCTAAATACCCCTCCAGGCACCAAAATTAGGATAACTAAGAATCTTCGAGTATGTGTAATTTCCACACAGTAACAAAATTAATATCAAAACTCATGGATTGA
GAAATCATCATGCGTGATAACCACAGGTTTCACCATTTTATTGATGGAATTTGTTCTTGTGGTGATTTTTGGTAATTACTACATAACTTTGTTTCATATCAAATTTATTC
AATAACAAGAGGTATGGTATTTCTTCTA
Protein sequenceShow/hide protein sequence
MGDGSVACISLQQQYQHIMETFPIPSEKMLWAVAPDAITIVAVLGACEKIQPCNLGTNGIHGRGKEAISIFNEMTANDISPDEGVLTSVLSACSHSGLLNEAYELVKRVE
VEPSADIWATLLSSCRLHQNVELVEICAQNIFRTNPSRVSSYTCLSNIYATMKQWTAVEKVRATVRKRGLKKPAGYSLIELDSQVHMFFVGDKSHQQTKDIYAKLKDIST
RFKEEGYKPDTSPVLYDVNEEQKRRCFGTIVSDWQLLLLF