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Lsi11G014920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:23422059..23422307
RNA-Seq ExpressionLsi11G014920
SyntenyLsi11G014920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]1.6e-3089.02Show/hide
Query:  MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
        M SIATTTDLPLSAAPEP+E GT EG   AEAPEIRR+GKHHGD SVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
Subjt:  MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
KAE8645753.1 hypothetical protein Csa_020263 [Cucumis sativus]2.6e-2082.35Show/hide
Query:  SIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIR
        SIATTT+LPLS APE SE GT EG   AEAPEIRR+GKHHGD S+AGGGVIIGGLVTA+FAAVFCYIR
Subjt:  SIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIR
KAF3964431.1 hypothetical protein CMV_011281 [Castanea mollissima]3.8e-1669.33Show/hide
Query:  IATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGV
        +A   D P+S+  E  E G  E    AEAP IRR+GKHH D SVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD V
Subjt:  IATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGV
KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2682.93Show/hide
Query:  MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
        MAS ATTT   +SAAPEPSET   EG G AEAPEIRR+GKHH D SVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDSVH
Subjt:  MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2682.93Show/hide
Query:  MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
        MAS ATTT   +SAAPEPSET   EG G AEAPEIRR+GKHH D SVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDSVH
Subjt:  MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
TrEMBL top hitse value%identityAlignment
A0A0A0K3N0 Uncharacterized protein2.8e-2885Show/hide
Query:  SIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
        SIATTT+LPLS APE SE GT EG   AEAPEIRR+GKHHGD S+AGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDSVH
Subjt:  SIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
A0A2N9IXN3 Uncharacterized protein2.7e-1566.67Show/hide
Query:  IATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGV
        +A   D P+S+  E  E  + E    AEAP IRRMGKHH D S+AGGGVIIGGL TAIFA VFCYIRVTRKRDGV
Subjt:  IATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGV
A0A445KG58 Uncharacterized protein1.6e-1572.73Show/hide
Query:  LSAAPEPSETGTGEGYGGAEAPEIRRMGKHH-GDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD
        +  +P  SE  +GE    AEAP+IRRMGKHH  D SVAGGGVIIGGLVTAIFAAVFCYIRVTR+RD
Subjt:  LSAAPEPSETGTGEGYGGAEAPEIRRMGKHH-GDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD
A0A5D3C590 Uncharacterized protein7.8e-3189.02Show/hide
Query:  MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
        M SIATTTDLPLSAAPEP+E GT EG   AEAPEIRR+GKHHGD SVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
Subjt:  MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH
I1KF92 Uncharacterized protein1.6e-1572.73Show/hide
Query:  LSAAPEPSETGTGEGYGGAEAPEIRRMGKHH-GDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD
        +  +P  SE  +GE    AEAP+IRRMGKHH  D SVAGGGVIIGGLVTAIFAAVFCYIRVTR+RD
Subjt:  LSAAPEPSETGTGEGYGGAEAPEIRRMGKHH-GDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein2.4e-0856.6Show/hide
Query:  AEAPEIR------RMGKHHG--DNSVAGGGVIIGGLVTAIFAAVFCYIRVTRK
        AEAPE+       R G HH   + SVAGGGVI+GGL T     VFCYIR TRK
Subjt:  AEAPEIR------RMGKHHG--DNSVAGGGVIIGGLVTAIFAAVFCYIRVTRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGATTGCCACAACAACAGATCTCCCGCTGTCGGCGGCGCCGGAGCCATCGGAGACCGGGACTGGAGAAGGGTATGGAGGGGCGGAGGCGCCGGAGATCCGGCG
GATGGGAAAGCATCACGGCGATAACTCGGTGGCCGGCGGGGGAGTCATCATCGGCGGCCTCGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGGA
AAAGAGATGGGGTTGATTCGGTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGATTGCCACAACAACAGATCTCCCGCTGTCGGCGGCGCCGGAGCCATCGGAGACCGGGACTGGAGAAGGGTATGGAGGGGCGGAGGCGCCGGAGATCCGGCG
GATGGGAAAGCATCACGGCGATAACTCGGTGGCCGGCGGGGGAGTCATCATCGGCGGCCTCGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGGA
AAAGAGATGGGGTTGATTCGGTTCATTGA
Protein sequenceShow/hide protein sequence
MASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH